Csor.00g164790 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g164790
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ubiquitin receptor RAD23
Location	Csor_Chr04: 7884360 .. 7891347 (-)
RNA-Seq Expression	Csor.00g164790
Synteny	Csor.00g164790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTTTTGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCGAAGTTAAGCCTGAAGATATGGTCAGTTAACTTTCTTCATCGGTTTCAGTTTTGTTTTTCATTTAAATCGTTCGCATTAAGATTGTGACTCGGAATCGAGGCTCTTTAACTACGTTTTGGATTCCGGTTTGTGCTTATTACTTCCAATTGAAATGTAATTAGGGTTTATGCGATGGTAGTTCGTTGTTTTAGTTGTTGAATTTCTGCTTGTTGTGCGATCGAATTGAATTGCGATTTGGAATTTTCATCTTGCTCGTCGTGGTTACTGCACTAATTCTGTAATGTTTCTTTTGTTATTTTTTCCTAGTAGAACATTAAGTAGTTCTCTTTGTTTTATTGTTTTTTGTTTTATTGTAGCTACTGGACGTGTATATTGGTATGCGTTGTCATTAGCATTAAGTTGCGTAGTTAATCTAATACTTGCGTGCTTATTTACAATTAACTTCACAACTGATGTCATCGTTTCCTATGGGGACTTGGACTAGAAGTGATCTCGCTGCTCGTATTTTGAGAATGATGTATTAAATTCGAAACAATAAGAAAGACAAAGACGGCAGGTCTTAAGACCGATTGATTGAGTGATTACGGAGAGAATCTTTGAATGGATAAGAATTATTTCATTTGTAACCCAAATATTCAGTAAGGAAAGGAAGGATGGCACCAATTCCTACATAATAATAAGAAAGGTAAAAAAACAACCATACGTTTATTTAAACAAGGAGCATCATTGAGAAGGCTTGATAACGCTAAGATCCATAAAGTTAAATACATTTTAGACTTCTCAAATACTATTCCTGTAAGTCGTGTATAAGCATAATGTTCTTGTAATTCTAAAGAATATACTAATACTGTGACCTAGACGTCTCACTGCTTTTTCTTGATCTAATCAACATCCATACTCACCTATTCCTCTAGATTCTAGCACAATTAAGTATGTGATCAAATTAATGATTCACCTAATTATTTTTTTTCTCCTTTGGTTTTTCAGCGACATTAGACTTTGAGTGATGAAATTATATGTGGCCCAGCAATTTATCATCTCTACTGTAGTTTTCCATTGAACTGATCCTTTCAGTTTCACGTTCTGAAGCGATGCAATTCCAATTATAGAATTGCAAGAAACCTTAGCCCCTCCCTTATAAGCAGATGCATATCACACTTGCGCCTGATTCATCTCCTCCTCTTTGCATTCTTGTGGAACTACTTAATATTTTCAAGTATTTGTTTTGCATATGTTCCTAAAGGCTGTAGGTGAAGTTCTCTTTCTACTTGAAACAAAACCCTTCTTTGTAATTTAGCATCTAGCAATCTCTTGGATGAGGAATTTTCTTTGTAATTTGGACTTTGTCAAACCATTTTCATTCAACCTTCTCCTTTGTGTTCAATATAGTGGGGTTCTACATATTAGGTATGTATGGGAGTCATGAGTAATGACAACCTTTGTGAATGCCCACAAGTTCCACCCATGATTTCCTGTCTTGTACAGGAAGATAATTCTTAATCCTCTGCCATTTCCTCATTCTATCGGATTAAGCATTTATATCTTTGCCCTAATCTTGTGTTTCAACCTCTCCCCATTCCAAAGTGCTTTCCTATACCACACAAGTTATAACTATTTAGGAAGCAACTAGGTGTTCTAATTGCTTTCAACCATCTCTAAGGATTCTGTCATGCATAAGAGCCAATAACTTCTCGTGCAACATGCACTCTTGTAAAGCTTCTAATCATGATCGAAATTTGACCTTGATCACAGTTATAGCTGGCTTTTAGTCCATTTTCCTACTGTTGTTATTCTACGTGGCTTTTAGTTGCATGGTGATTACACTATTGCAAGTCATTTCTCTAATTTTCTCCTCAGATTCTCAAGATAGAGCCGATTCTAAAAATTAGGTCTAAATCAGGTAATAGTAATTTTGTATGAAGGGGTTGCGTTGAGCCTATGTAAGGATATCACTTTTTATCTTTTCTTCCTTTTTTTAGAAGCAACTTCCAAAATATGTAAGCCTGTCACTTTCACTTGCTGCCAATCCCATTAGGTCAGAGGCACAATCAAATTAGATGTGTTGGCCATGTATGTTGATTTTTTTATTTTTTATTTTTTTGGAATTCTGAAATGCTTGGAAGTCACCCCTGATAAAATATCATCATGGAATTCAGCGATGATGCTAATTAATTTAATAGCCAAAATGTAATACGTCAAAATTTAAATATTTAATTGATAACTAAACTGTATAAATATGTACTATCATTTTTCTTTATCCATTTTATTTGAGCAGTTTTTTTTTTTTTTTTTTTAAAGGTATTGCACACACGTTCTATATCAAACTCCTCTAATGTCAATTATAGATTAGTATATATAATAACTGGCAAATTCTCCTAAAATCATGGACTAGACTTTACAGAGTAAAATTTAAAATTTAAAATATTTACATAATTTTATTTGAGTCTTTTATCTGACCTAACTGACATCATCATAATAGAATAATTGGCATTAATACTACAAGATCCACAATGTAAAGTCATGGGCATTAGATTAGCCAACCCCACTAACTGCATGCTACCATCTAACATTTAAGAAGAGAGAATACTTACGGTACTTAATACTTATAAGTAAATTTTCGCTCAAATAGTTAATCTTTGTTTGATGCTGGCACCTACATTCACTGCAAGATTTTACAAACAAAATAAGTTTAATACATATATTCCTACCTTTGGTAAATTTTAAAAAGCACATGGTTGTATTCAACTTTCATTATCTGTTGTGCCACCATGCATACCTTCTGTCTTTTGGAATGTTAAATAAATTGATTTTTGTTGGTTCTTAGGTTGCTGATGTGAAGAAGAACATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCTCAGCAGATGCTTATCCATCAAGGGAAAGTCCTTAAAGACGGCACAACACTGGACGAAAATAAAGTTTCCGAAAATAGTTTTATTGTAATAATGTTAACAAAGGTAATGATTTTTTTTTTTTTTTTTTTTTTGATCGGAAGGATTGTGTAAATAATATATTCTTGGGATATGAGAGATTAATATTCTTACAAAGAAAAAAGCTTGATTCATTATTTTAACAAAAAGAGATATTTAATGAATTCAATGGTTAGATTACCTCATGCCATCATCAAAAGCCATCGTGAAAGCCAATACCCTCCAGGCTTCATATTAGTGAAGGTTATTTGCTAAAATGACACATCTATAGTTCAGTCAATCATGTTGGAGACTGTGGAATAGCACCTGGATGTGTGTTGTGTTTTGGCTTTAACTAGAGCTTTTGATGGTCAAAGATGAACTATATGATGAAAGGGGTAATGTATTTATTTTTGTATTGATGATATTTTTCTTTAATTTAACACGGTTTCCACATGGTACTCCTTTTTAAGCTAGAAAGATGTGATAGTGAGGATGCAATTTTAGTTGGATGAAACAAGGAGGTGTTCTTCCACCCTCTGTTTCGAGATAAGGGGTTGTATATTTTTGTGGTCTTCTTTTTTACTACTTTATGAGGGATGTGGATGGAGAGAAATAGGTGACGTTTTAATGGAATGTTGAGGCCTTGTGAAGAAGTTAGTGTGTTTCCCTTTGAGTGTCTATGCCCAACTATTTTTGTCATTATTAGAGAAATTTTGTCAGGAAACGTGTAGTATTCATTCCTTGACTGTACTTGCTCTCTTAGTTTGATGAAGAGGGAAGATGGTTTACCACTATTGATTGGGAGAGTTGTCTTGATAACGCTGTATACTACCTTGCCTTGAGATGGAGGCTTACAAATTGGTAGTGTAGTGCTGGGAAGTGTCAGCACTACAGAAGAGAGTGTTTCTGCCTTCTTTTGTATTGTTTGTTACTAAGTTGCACAGCACTGTTCCTGTTGTCTGCACTTGAATTTGAAGTGACGACAAAAATCTTGATGTGTTTAGTTGTACAAGATCATATTGCAACTTTTATTGATGGGCTAAAGTGTGAAACCTTTTGTTTATTTCTCTTCATGACCGTTTTTTTTTTCTCTGTTTTGTTTTGCTCAAATGATTGTTTTGTTTTTTTTATTTACTTTTTGTTTGTAGAATAAAAGTTCATCGGGTGCGACATCTTCTACCACACAAGCTGCGCCAGTATCGAAGGTAAGCATAATTATAAGCTTTACTGGCAAGTGGTAATGGTGGTGACAGTTTCAATGTGTCTTTGAATGTTTTAAATGTTGTAATTCACTTTTTTCCATCTTTTCCCCTTCTGTTTTTTCCACCGAGTTTATTGGATGCTAATATCAATTCTTGTGTAAGCTTTTTAGTACTTAATTTTGGTGGTTTGTATTCTTTTGTGAGCCAATAGTTGTACCTGTCCCTCGAAGTGGTTGGTCATTTTCACACTATTGAATGAATTTATCAGTTACTCTAATTCTCTGTAGTTAACAAAAAACTAATATATATTGCTTAAAGTAGTGGATGCATAAATTTGTCTTCAAGTATTTATATAATTGACAAAATGGTTTTTCATTTCTTCATAATTCTCTGAAGTCAATGTTTTTTTTTTTAAAAAAAAAAAAAAGATATTGATGGTACAAAAATAGTTGTACATGTTATCTCAAAATAATCAATATACAAACCATTCATGATGTTTGATTTCTGTTGCCAATCCTTTGGAGTTAAAGCAGTGTTCTTCAATTGTGTTATTTATTCGCATAAAATATTATTTTTTCGACTAATTTTCTTGTGAAAAAGGAAATAAAGAGAAATTGGATTTATAGTATGATATGACTAACTTGCAGGCACCACAGAACACTGCCCCTGCACCTGCTGCCACTCCAGTGTCAACGTCGGAAGTTCCTCTACCAACGTCAGCACCGTGAGTTTAAATTCACTTCTATGTCTTCCACTTCATTTTCCAGAATAATTGTTCTGGGAGCATTTACGATTATGTCAATAATCTTTATTTCAGGCCTGCTACTGTTACCGACTCTACTCCTCCCGCTCCTCCGGCTCTGGCTCCAGCTCCAGCTCCGTCTCCAGCTGCAGTTCCTGCAACCACTGTTTTGTGAGGAATTTTCTGCCCTTTCCTTGATGGTTTTTCGTATTCTTTGCAAGGGCTCCTTTCTCTCTATTTCAAGTTTTCTAAATTTCCTGTATTACACATTATGAAACACAGGGCAGAATCCGATGTCTACAGCCAAGCAGCTTCTAACCTGGTTGCTGGTAGTAACTTGGAGGACACTATCCAACAAATTCTTCTCATGGGCGGAGGGATTTGGGACAGAGACACTGTTGTTCGAGCTCTTCGTGCTGCTTACAATAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGTAAGTCCAGATTTTAATTCTTTTTCGGTTCTACTGTTATTCTCGTCTCAACATATTTTAGCAAGTTCTCTTTTGAGGCTTTCTTTCAGTTGAGGAGTGGACCTTGAACTTGTAATTGTACTTGGAACCTGGAATTACTATTGGTTGATGTTCCTTATTAGTGAATGAATTATGAATGGTCATACTTTTATCTCTGCTAGCTTAATTGATTTAGAATGTATTGTATGAACAAAATTATCTTATTATATGTAGGGAATACCTGAACAACTTGAAACCCCACCTGCTGCTGGAGTTCCGTCTACTGTGCAAGCGACCAACCCTTCAGCCCAACCTGCACAGCCAGCCCAGCCTGCATCTGTGACGTCAACTGGCCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGTAGGAAAAGAAAAATTAAGCAACTTGACAGGTTCGTTTTAATATTACAAGTTTGCTAGGAAAAAATGATCGAGAAATTTTATAGGTTATTTTCAAAACTTGAAAGTTTATGAACCTTTTTTTTTTTTTTTTTTTTCTTTTACTTCAGGGTTTGAACCTCTTTTTTTTTTTTTTTACTTCAGGGTTTGCCTAATATATCTTCCGGAGCTGTTGGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGGTCTCTCTCTCCTCCTCCTCCCAAACCGACAGATTCACTTCATATTATGCCCGCCTCTGAAAATGTGTTCTTTCCTGTCTCAGTTCCAAGCTTTGCGAGCAATGGTGCGAGCTAATCCTCAGATACTCCAGGTTCTTCATCTACTGCAATTGACACTTTTTTCTAAACGTGAGGTTCATTACTTCATTTTATAAAGGCCCCATTTCTTTGATTTTGTTTTAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGTTGATTAGGCTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCCCTTGAAGGAGAAGGGTAAATCTTTTTTCCCCACTTCTGACTTTGAACCAATGGTGGAAGTTGATGGATTATAATAATATCCAAAAACTTGTTCAGGAATATACTTGGGCAGCTTGCTGAGGCTATGCCGCAGGCTATAACTGTAACCCCGGAGGAGCGTGAAGCCATTCAACGGGTTAGTTTACCTTATACATTATCATATGACTTCTTGATTTAGCAACTTTTAATTGATTCTTGAATGGTCAATTTTTAGGTTTAGTAGTTCCTTGAAATATTCAAAAATTTAAAAGTTAATCGATATATTAAAATAAAAATTTGAATTTTATGTTTGAAGTGACTCTAAACTTCCAGTTTTATATCTAGTAGGTCTAGAAATTTTAAAAACATCAATCAATTTGGACACAATTGAAAGTTAATTTAACATAAAAAATAAAGGCAATGGGATTCACTAGATCTTTTATGATTAACTATATTGTGGTCATCTGTCTTCCTTCCAAACAGCTTGAGGATTTGGGCTTCGACAGAGCTCTAGTAGTGGAGGTTTTCTTCGCCTGCAACAAGAACGAGGAAATGGCTGCCAACTATCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAG

mRNA sequence

ATGAAGATTTTTGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCGAAGTTAAGCCTGAAGATATGGTTGCTGATGTGAAGAAGAACATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCTCAGCAGATGCTTATCCATCAAGGGAAAGTCCTTAAAGACGGCACAACACTGGACGAAAATAAAGTTTCCGAAAATAGTTTTATTGTAATAATGTTAACAAAGAATAAAAGTTCATCGGGTGCGACATCTTCTACCACACAAGCTGCGCCAGTATCGAAGGCACCACAGAACACTGCCCCTGCACCTGCTGCCACTCCAGTGTCAACGTCGGAAGTTCCTCTACCAACGTCAGCACCGCCTGCTACTGTTACCGACTCTACTCCTCCCGCTCCTCCGGCTCTGGCTCCAGCTCCAGCTCCGTCTCCAGCTGCAGTTCCTGCAACCACTGTTTTGGCAGAATCCGATGTCTACAGCCAAGCAGCTTCTAACCTGGTTGCTGGTAGTAACTTGGAGGACACTATCCAACAAATTCTTCTCATGGGCGGAGGGATTTGGGACAGAGACACTGTTGTTCGAGCTCTTCGTGCTGCTTACAATAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGGAATACCTGAACAACTTGAAACCCCACCTGCTGCTGGAGTTCCGTCTACTGTGCAAGCGACCAACCCTTCAGCCCAACCTGCACAGCCAGCCCAGCCTGCATCTGTGACGTCAACTGGCCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGGTTTGCCTAATATATCTTCCGGAGCTGTTGGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGTTCCAAGCTTTGCGAGCAATGGTGCGAGCTAATCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGTTGATTAGGCTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCCCTTGAAGGAGAAGGGAATATACTTGGGCAGCTTGCTGAGGCTATGCCGCAGGCTATAACTGTAACCCCGGAGGAGCGTGAAGCCATTCAACGGCTTGAGGATTTGGGCTTCGACAGAGCTCTAGTAGTGGAGGTTTTCTTCGCCTGCAACAAGAACGAGGAAATGGCTGCCAACTATCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAG

Coding sequence (CDS)

ATGAAGATTTTTGTCAAGACTCTCAAGGGCTCGCACTTCGAAATCGAAGTTAAGCCTGAAGATATGGTTGCTGATGTGAAGAAGAACATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCTCAGCAGATGCTTATCCATCAAGGGAAAGTCCTTAAAGACGGCACAACACTGGACGAAAATAAAGTTTCCGAAAATAGTTTTATTGTAATAATGTTAACAAAGAATAAAAGTTCATCGGGTGCGACATCTTCTACCACACAAGCTGCGCCAGTATCGAAGGCACCACAGAACACTGCCCCTGCACCTGCTGCCACTCCAGTGTCAACGTCGGAAGTTCCTCTACCAACGTCAGCACCGCCTGCTACTGTTACCGACTCTACTCCTCCCGCTCCTCCGGCTCTGGCTCCAGCTCCAGCTCCGTCTCCAGCTGCAGTTCCTGCAACCACTGTTTTGGCAGAATCCGATGTCTACAGCCAAGCAGCTTCTAACCTGGTTGCTGGTAGTAACTTGGAGGACACTATCCAACAAATTCTTCTCATGGGCGGAGGGATTTGGGACAGAGACACTGTTGTTCGAGCTCTTCGTGCTGCTTACAATAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGGAATACCTGAACAACTTGAAACCCCACCTGCTGCTGGAGTTCCGTCTACTGTGCAAGCGACCAACCCTTCAGCCCAACCTGCACAGCCAGCCCAGCCTGCATCTGTGACGTCAACTGGCCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGGTTTGCCTAATATATCTTCCGGAGCTGTTGGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGTTCCAAGCTTTGCGAGCAATGGTGCGAGCTAATCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGTTGATTAGGCTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCCCTTGAAGGAGAAGGGAATATACTTGGGCAGCTTGCTGAGGCTATGCCGCAGGCTATAACTGTAACCCCGGAGGAGCGTGAAGCCATTCAACGGCTTGAGGATTTGGGCTTCGACAGAGCTCTAGTAGTGGAGGTTTTCTTCGCCTGCAACAAGAACGAGGAAATGGCTGCCAACTATCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAG

Protein sequence

MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLDENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSAPPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN

Homology

[Close]

BLAST of Csor.00g164790 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-134
Identity = 270/402 (67.16%), Postives = 311/402 (77.36%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEIEVKP D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S    S+ +  AP +  PQ  A    + P  T+ VP+PTS 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAP--TASVPVPTS- 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
                                 + AA PAT    ++DVY QAASNLVAG+ LE T+QQIL
Sbjct: 121 --------------------GTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPST-VQATNPSAQP 240
            MGGG WDRDTVVRALRAA+NNPERAV+YLYSGIP Q E PP A  P+T  QA NP AQP
Sbjct: 181 DMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQP 240

Query: 241 AQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQ 300
            Q A PA+ T  GPNANPL+LFPQG+P   +GA G+G+LDFLRNS QFQALRAMV+ANPQ
Sbjct: 241 QQAAAPAAATG-GPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQ 300

Query: 301 ILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEER 360
           ILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE N++ QL  AMPQA+TVTPEER
Sbjct: 301 ILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEER 360

Query: 361 EAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 402
           EAI+RLE +GFDRA+V+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 EAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFE 376

[Close]

BLAST of Csor.00g164790 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 479.9 bits (1234), Expect = 2.7e-134
Identity = 278/423 (65.72%), Postives = 324/423 (76.60%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEIEVKPED V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATP-----VSTSEVP 120
           ENKV+ENSFIVIM+ K+K +S A SS +     +K+   +   P+ +P     VS    P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 LPTSAPPATVTDSTPPAPPA-----LAPAPAPSPAAVPATT-------VLAESDVYSQAA 180
            PT  PP   T +  PAP A       P P P PA + ++T       V ++ DVY QAA
Sbjct: 121 APTRPPPPAPTPT--PAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAA 180

Query: 181 SNLVAGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPA 240
           SNL AGSNLE TIQQIL MGGG WDR+TVV ALRAA+NNPERAV+YLY+GIPEQ E PP 
Sbjct: 181 SNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPV 240

Query: 241 AGVPSTVQATNPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRN 300
           A  P++  A  P+  PAQ  QPA+  ++GPNANPLDLFPQGLPN+  G  G+G+LDFLRN
Sbjct: 241 ARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLRN 300

Query: 301 SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGNI 360
           S QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN+
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360

Query: 361 LGQLAEAM--PQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIH 402
           LGQ+A  M  PQAI VT EEREAI+RLE +GF+RALV+EVFFACNKNEE+AANYLLDH+H
Sbjct: 361 LGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMH 418

[Close]

BLAST of Csor.00g164790 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 421.4 bits (1082), Expect = 1.2e-116
Identity = 245/407 (60.20%), Postives = 298/407 (73.22%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKI VKTLKGS F+IEV     VADVK+ IET QG  +YPA QQMLIHQGKVLKD TTLD
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVS-TSEVPL-PT 120
           ENKV ENSF+VIML + K SS +  +T      SKAP N AP     P +  S+ P+ P 
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPAT------SKAPSNQAPPTQTVPAAPASQAPVAPA 120

Query: 121 SAPPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQ 180
           +  P TV+          AP P  + +  PA  V +E+D Y QA SNLVAGSNLE TIQ 
Sbjct: 121 TTVPVTVS----------APTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQS 180

Query: 181 ILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNP--S 240
           IL MGGGIWDRD V+ AL AA+NNPERAV+YLYSG+PEQ++ P     P ++Q  NP  +
Sbjct: 181 ILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVP---PPSIQPANPTQA 240

Query: 241 AQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRA 300
           +Q  QPA P S+ S+GPNA+PLDLFPQ LPN S+ A G G+LD LRN+ QF+ L ++V+A
Sbjct: 241 SQATQPAAP-SILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLSLVQA 300

Query: 301 NPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG--EGNILGQLAEAMPQAITV 360
           NPQILQP+LQELGKQNPQ+++LIQ++Q +FL LINEP EG  E N+L Q  EAMPQ I V
Sbjct: 301 NPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 402
           TPEE EAI RLE +GFDRALV++VFFACNK+E++AANYLLDH++EF+
Sbjct: 361 TPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFD 387

[Close]

BLAST of Csor.00g164790 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 366.7 bits (940), Expect = 3.4e-100
Identity = 218/404 (53.96%), Postives = 271/404 (67.08%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P D +  VKKNIE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+E  F+V+ML+K+KS   A  ++ Q + VS+            PVS          
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQ------------PVS---------- 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
             AT + + P AP     +P P+          A++D Y QAAS LV+GS+LE  +QQI+
Sbjct: 121 --ATTSSTKPAAPSTTQSSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIM 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
            MGGG WD++TV RALRAAYNNPERAVDYLYSGIP+  E   A  VP   Q     A P 
Sbjct: 181 EMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEV--AVPVPE-AQIAGSGAAPV 240

Query: 241 QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI 300
            PA      S GPN++PLDLFPQ     ++G+   G+L+FLRN+ QFQ LR MV +NPQI
Sbjct: 241 APA------SGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQI 300

Query: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNILGQLAEAMPQAITVTPE 360
           LQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  Q  + MP AI VTP 
Sbjct: 301 LQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPA 360

Query: 361 EREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 402
           E+EAIQRLE +GFDRALV+E F AC++NEE+AANYLL++  +FE
Sbjct: 361 EQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 370

[Close]

BLAST of Csor.00g164790 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 3.0e-96
Identity = 209/405 (51.60%), Postives = 270/405 (66.67%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P D +  VKKNIE  Q  D YP  QQ+LIH GKVLKD TTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+E  F+V+ML+K+K++S A  S+TQ                           PTS 
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQ---------------------------PTST 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPA-TTVLAESDVYSQAASNLVAGSNLEDTIQQI 180
             +T++ +T  AP        P+  + P      A+SD Y QAAS LV+GS++E  +QQI
Sbjct: 121 TTSTISSTTLAAPSTTQSIAVPASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQI 180

Query: 181 LLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQP 240
           + MGGG WD++TV RALRAAYNNPERAVDYLYSGIPE +          T+ ATN S   
Sbjct: 181 MEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETV----------TIPATNLSGVG 240

Query: 241 AQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQ 300
           +     A   S GPN++PLDLFPQ   + ++G    G+L+FLR + QFQ LR+MV +NPQ
Sbjct: 241 SGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGG-DLGTLEFLRGNDQFQQLRSMVNSNPQ 300

Query: 301 ILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNILGQLAEAMPQAITVTP 360
           ILQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   G+ +I  Q  + MP ++ VTP
Sbjct: 301 ILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTP 360

Query: 361 EEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 402
           EE+E+I+RLE +GFDRA+V+E F +C++NEE+AANYLL+H  +FE
Sbjct: 361 EEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFE 367

[Close]

BLAST of Csor.00g164790 vs. NCBI nr
Match: KAG6601319.1 (Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 757 bits (1955), Expect = 4.97e-275
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL
Sbjct: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240

Query: 241 QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI 300
           QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI
Sbjct: 241 QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI 300

Query: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE 360
           LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE
Sbjct: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE 360

Query: 361 AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405

[Close]

BLAST of Csor.00g164790 vs. NCBI nr
Match: XP_022956931.1 (ubiquitin receptor RAD23d-like [Cucurbita moschata])

HSP 1 Score: 751 bits (1938), Expect = 2.43e-272
Identity = 405/411 (98.54%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL
Sbjct: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240

Query: 241 QPAQPA------SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300
           QPAQPA      SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
Sbjct: 241 QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300

Query: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360
           RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
Sbjct: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 411

[Close]

BLAST of Csor.00g164790 vs. NCBI nr
Match: XP_023539321.1 (ubiquitin receptor RAD23d-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 748 bits (1930), Expect = 4.02e-271
Identity = 403/411 (98.05%), Postives = 404/411 (98.30%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAP+NTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPENTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL
Sbjct: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLE PPAAGVPSTVQATNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLEAPPAAGVPSTVQATNPSAQPA 240

Query: 241 QPAQPA------SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300
           QPAQPA      SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
Sbjct: 241 QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300

Query: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360
           RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
Sbjct: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 411

[Close]

BLAST of Csor.00g164790 vs. NCBI nr
Match: KAG7032103.1 (Ubiquitin receptor RAD23c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 744 bits (1920), Expect = 1.75e-269
Identity = 405/418 (96.89%), Postives = 405/418 (96.89%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSK-------APQNTAPAPAATPVSTSE 120
           ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSK       APQNTAPAPAATPVSTSE
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKYDMTNLQAPQNTAPAPAATPVSTSE 120

Query: 121 VPLPTSAPPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLE 180
           VPLPTSAPPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLE
Sbjct: 121 VPLPTSAPPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLE 180

Query: 181 DTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQAT 240
           DTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQAT
Sbjct: 181 DTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQAT 240

Query: 241 NPSAQPAQPAQPA------SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQF 300
           NPSAQPAQPAQPA      SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQF
Sbjct: 241 NPSAQPAQPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQF 300

Query: 301 QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEA 360
           QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEA
Sbjct: 301 QALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEA 360

Query: 361 MPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           MPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 MPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 418

[Close]

BLAST of Csor.00g164790 vs. NCBI nr
Match: XP_022980399.1 (ubiquitin receptor RAD23d-like [Cucurbita maxima])

HSP 1 Score: 734 bits (1894), Expect = 1.14e-265
Identity = 398/411 (96.84%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV+PEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVSENSFIVIMLTKNKSSSG TSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPATVTDS+PPAPPALAPAPAP  A VPAT VLAESDVYSQAASNLVAGSNLEDTIQQIL
Sbjct: 121 PPATVTDSSPPAPPALAPAPAP--ATVPATPVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240

Query: 241 QPAQPA------SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300
           QPAQPA      SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
Sbjct: 241 QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300

Query: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360
           RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
Sbjct: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 409

[Close]

BLAST of Csor.00g164790 vs. ExPASy TrEMBL
Match: A0A6J1GXU6 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111458469 PE=3 SV=1)

HSP 1 Score: 751 bits (1938), Expect = 1.18e-272
Identity = 405/411 (98.54%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL
Sbjct: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240

Query: 241 QPAQPA------SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300
           QPAQPA      SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
Sbjct: 241 QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300

Query: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360
           RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
Sbjct: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 411

[Close]

BLAST of Csor.00g164790 vs. ExPASy TrEMBL
Match: A0A6J1IZ65 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111479749 PE=3 SV=1)

HSP 1 Score: 734 bits (1894), Expect = 5.52e-266
Identity = 398/411 (96.84%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV+PEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVSENSFIVIMLTKNKSSSG TSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPATVTDS+PPAPPALAPAPAP  A VPAT VLAESDVYSQAASNLVAGSNLEDTIQQIL
Sbjct: 121 PPATVTDSSPPAPPALAPAPAP--ATVPATPVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240

Query: 241 QPAQPA------SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300
           QPAQPA      SVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV
Sbjct: 241 QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300

Query: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360
           RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV
Sbjct: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 409

[Close]

BLAST of Csor.00g164790 vs. ExPASy TrEMBL
Match: A0A6J1G0H9 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 701 bits (1810), Expect = 3.87e-253
Identity = 376/412 (91.26%), Postives = 391/412 (94.90%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV+P+DMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+ENSFIVIMLTKNKSSSG TSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAP-------PALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLE 180
           PPAT+T S+ PAP       PA A APAP+PA  PATTVL ESDVYSQAASNLVAGSNLE
Sbjct: 121 PPATITTSSLPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE 180

Query: 181 DTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQAT 240
           +TIQQILLMGGGIWDRDTVV+ALRAAYNNPERAVDYLYSGIPEQ+E PPAA VPSTV  T
Sbjct: 181 ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT 240

Query: 241 NPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAM 300
           NPSAQPAQPAQPAS T+TGPNANPLDLFPQG+PN++SGAV SGSLDFLRNSPQFQALRAM
Sbjct: 241 NPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM 300

Query: 301 VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAIT 360
           VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQLA+AMPQAIT
Sbjct: 301 VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT 360

Query: 361 VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 412

[Close]

BLAST of Csor.00g164790 vs. ExPASy TrEMBL
Match: A0A6J1G0K5 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 699 bits (1804), Expect = 1.88e-252
Identity = 371/405 (91.60%), Postives = 386/405 (95.31%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV+P+DMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+ENSFIVIMLTKNKSSSG TSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPAT+T S+        PAPAP+PA  PATTVL ESDVYSQAASNLVAGSNLE+TIQQIL
Sbjct: 121 PPATITTSS-------LPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVV+ALRAAYNNPERAVDYLYSGIPEQ+E PPAA VPSTV  TNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPA 240

Query: 241 QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI 300
           QPAQPAS T+TGPNANPLDLFPQG+PN++SGAV SGSLDFLRNSPQFQALRAMVRANPQI
Sbjct: 241 QPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQI 300

Query: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE 360
           LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQLA+AMPQAITVTPEERE
Sbjct: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEERE 360

Query: 361 AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 398

[Close]

BLAST of Csor.00g164790 vs. ExPASy TrEMBL
Match: A0A6J1HT74 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111467562 PE=3 SV=1)

HSP 1 Score: 697 bits (1798), Expect = 1.54e-251
Identity = 370/405 (91.36%), Postives = 385/405 (95.06%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV+P+DMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+ENSFIVIMLTKNKSSSG TSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
           PPAT+T S+        PAPAP+PA  PATTVL ESDVYSQAASNLVAGSNLE+TIQQIL
Sbjct: 121 PPATITTSS-------LPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
           LMGGGIWDRDTVV+ALRAAYNNPERAVDYLYSGIPEQ+E PPAA VPSTV  TNPSAQPA
Sbjct: 181 LMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPA 240

Query: 241 QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI 300
           QPAQPAS T+TGPNANPLDLFPQG+PN++SGAV SGSLDFLRNSPQFQALRAMVRANPQI
Sbjct: 241 QPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQI 300

Query: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEERE 360
           LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQLA+AMPQAITVTPEERE
Sbjct: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEERE 360

Query: 361 AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 405
           AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 AIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 398

[Close]

BLAST of Csor.00g164790 vs. TAIR 10
Match: AT5G38470.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 481.1 bits (1237), Expect = 8.8e-136
Identity = 270/402 (67.16%), Postives = 311/402 (77.36%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEIEVKP D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S    S+ +  AP +  PQ  A    + P  T+ VP+PTS 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAP--TASVPVPTS- 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
                                 + AA PAT    ++DVY QAASNLVAG+ LE T+QQIL
Sbjct: 121 --------------------GTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPST-VQATNPSAQP 240
            MGGG WDRDTVVRALRAA+NNPERAV+YLYSGIP Q E PP A  P+T  QA NP AQP
Sbjct: 181 DMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQP 240

Query: 241 AQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQ 300
            Q A PA+ T  GPNANPL+LFPQG+P   +GA G+G+LDFLRNS QFQALRAMV+ANPQ
Sbjct: 241 QQAAAPAAATG-GPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQ 300

Query: 301 ILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTPEER 360
           ILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE N++ QL  AMPQA+TVTPEER
Sbjct: 301 ILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEER 360

Query: 361 EAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 402
           EAI+RLE +GFDRA+V+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 EAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFE 376

[Close]

BLAST of Csor.00g164790 vs. TAIR 10
Match: AT3G02540.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 479.9 bits (1234), Expect = 2.0e-135
Identity = 278/423 (65.72%), Postives = 324/423 (76.60%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEIEVKPED V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATP-----VSTSEVP 120
           ENKV+ENSFIVIM+ K+K +S A SS +     +K+   +   P+ +P     VS    P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 LPTSAPPATVTDSTPPAPPA-----LAPAPAPSPAAVPATT-------VLAESDVYSQAA 180
            PT  PP   T +  PAP A       P P P PA + ++T       V ++ DVY QAA
Sbjct: 121 APTRPPPPAPTPT--PAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAA 180

Query: 181 SNLVAGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPA 240
           SNL AGSNLE TIQQIL MGGG WDR+TVV ALRAA+NNPERAV+YLY+GIPEQ E PP 
Sbjct: 181 SNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPV 240

Query: 241 AGVPSTVQATNPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRN 300
           A  P++  A  P+  PAQ  QPA+  ++GPNANPLDLFPQGLPN+  G  G+G+LDFLRN
Sbjct: 241 ARPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLRN 300

Query: 301 SPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGNI 360
           S QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN+
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360

Query: 361 LGQLAEAM--PQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIH 402
           LGQ+A  M  PQAI VT EEREAI+RLE +GF+RALV+EVFFACNKNEE+AANYLLDH+H
Sbjct: 361 LGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMH 418

[Close]

BLAST of Csor.00g164790 vs. TAIR 10
Match: AT3G02540.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 479.9 bits (1234), Expect = 2.0e-135
Identity = 278/422 (65.88%), Postives = 323/422 (76.54%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEIEVKPED V DVKKNIE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATP-----VSTSEVP 120
           ENKV+ENSFIVIM+ K+K +S A SS +     +K+   +   P+ +P     VS    P
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 LPTSAPPATVTDSTPPAPPA-----LAPAPAPSPAAVPATTVLAES------DVYSQAAS 180
            PT  PP   T +  PAP A       P P P PA + ++T   +S      DVY QAAS
Sbjct: 121 APTRPPPPAPTPT--PAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGQGDVYGQAAS 180

Query: 181 NLVAGSNLEDTIQQILLMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAA 240
           NL AGSNLE TIQQIL MGGG WDR+TVV ALRAA+NNPERAV+YLY+GIPEQ E PP A
Sbjct: 181 NLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVA 240

Query: 241 GVPSTVQATNPSAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNS 300
             P++  A  P+  PAQ  QPA+  ++GPNANPLDLFPQGLPN+  G  G+G+LDFLRNS
Sbjct: 241 RPPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLRNS 300

Query: 301 PQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGNIL 360
            QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN+L
Sbjct: 301 QQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLL 360

Query: 361 GQLAEAM--PQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHE 402
           GQ+A  M  PQAI VT EEREAI+RLE +GF+RALV+EVFFACNKNEE+AANYLLDH+HE
Sbjct: 361 GQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHE 417

[Close]

BLAST of Csor.00g164790 vs. TAIR 10
Match: AT5G38470.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 375.6 bits (963), Expect = 5.2e-104
Identity = 220/338 (65.09%), Postives = 252/338 (74.56%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEIEVKP D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S    S+ +  AP +  PQ  A    + P  T+ VP+PTS 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAP--TASVPVPTS- 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
                                 + AA PAT    ++DVY QAASNLVAG+ LE T+QQIL
Sbjct: 121 --------------------GTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQIL 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPST-VQATNPSAQP 240
            MGGG WDRDTVVRALRAA+NNPERAV+YLYSGIP Q E PP A  P+T  QA NP AQP
Sbjct: 181 DMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQP 240

Query: 241 AQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQ 300
            Q A PA+ T  GPNANPL+LFPQG+P   +GA G+G+LDFLRNS QFQALRAMV+ANPQ
Sbjct: 241 QQAAAPAAATG-GPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQ 300

Query: 301 ILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGE 338
           ILQPMLQELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE
Sbjct: 301 ILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEGE 312

[Close]

BLAST of Csor.00g164790 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-101
Identity = 221/404 (54.70%), Postives = 271/404 (67.08%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P D +  VKKNIE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+E  F+V+ML+K+KS   A  ++ Q  PVS    +T P   A P +T   P+P S 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQ--PVSATTSSTKP---AAPSTTQSSPVPAS- 120

Query: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180
                            P PA    A       A++D Y QAAS LV+GS+LE  +QQI+
Sbjct: 121 -----------------PIPAQEQPA-------AQTDTYGQAASTLVSGSSLEQMVQQIM 180

Query: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240
            MGGG WD++TV RALRAAYNNPERAVDYLYSGIP+  E   A  VP   Q     A P 
Sbjct: 181 EMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEV--AVPVPE-AQIAGSGAAPV 240

Query: 241 QPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRANPQI 300
            PA      S GPN++PLDLFPQ     ++G+   G+L+FLRN+ QFQ LR MV +NPQI
Sbjct: 241 APA------SGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQI 300

Query: 301 LQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNILGQLAEAMPQAITVTPE 360
           LQPMLQELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  Q  + MP AI VTP 
Sbjct: 301 LQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPA 360

Query: 361 EREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 402
           E+EAIQRLE +GFDRALV+E F AC++NEE+AANYLL++  +FE
Sbjct: 361 EQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 364

The following BLAST results are available for this feature:

BLAST of Csor.00g164790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L30	1.2e-134	67.16	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	2.7e-134	65.72	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	1.2e-116	60.20	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]
Q84L33	3.4e-100	53.96	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	3.0e-96	51.60	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]

BLAST of Csor.00g164790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601319.1	4.97e-275	100.00	Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022956931.1	2.43e-272	98.54	ubiquitin receptor RAD23d-like [Cucurbita moschata]	[more]
XP_023539321.1	4.02e-271	98.05	ubiquitin receptor RAD23d-like [Cucurbita pepo subsp. pepo]	[more]
KAG7032103.1	1.75e-269	96.89	Ubiquitin receptor RAD23c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022980399.1	1.14e-265	96.84	ubiquitin receptor RAD23d-like [Cucurbita maxima]	[more]

BLAST of Csor.00g164790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXU6	1.18e-272	98.54	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111458469 PE=3 SV=1	[more]
A0A6J1IZ65	5.52e-266	96.84	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111479749 PE=3 SV=1	[more]
A0A6J1G0H9	3.87e-253	91.26	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1G0K5	1.88e-252	91.60	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1HT74	1.54e-251	91.36	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111467562 PE=3 SV=1	[more]

BLAST of Csor.00g164790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38470.1	8.8e-136	67.16	Rad23 UV excision repair protein family	[more]
AT3G02540.1	2.0e-135	65.72	Rad23 UV excision repair protein family	[more]
AT3G02540.3	2.0e-135	65.88	Rad23 UV excision repair protein family	[more]
AT5G38470.2	5.2e-104	65.09	Rad23 UV excision repair protein family	[more]
AT1G79650.2	1.4e-101	54.70	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 304..326 score: 58.89 coord: 352..368 score: 61.76 coord: 369..383 score: 62.42 coord: 384..399 score: 61.36
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..401 e-value: 6.6E-118 score: 392.2
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 1.1E-21 score: 88.0
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 9.8E-18 score: 63.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 19.411978
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 358..395 e-value: 1.7E-8 score: 44.3 coord: 172..212 e-value: 9.1E-6 score: 35.2
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 358..393 e-value: 2.5E-11 score: 43.2 coord: 172..210 e-value: 1.7E-13 score: 50.1
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 355..396 score: 14.474662
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 170..213 score: 12.378214
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 276..319 e-value: 6.6E-6 score: 35.6
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 278..333 e-value: 3.7E-22 score: 77.8
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 4.6E-29 score: 102.0
None	No IPR available	GENE3D	1.10.8.10		coord: 165..215 e-value: 6.6E-21 score: 75.9
None	No IPR available	GENE3D	1.10.8.10		coord: 350..397 e-value: 3.8E-23 score: 83.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..143
None	No IPR available	PANTHER	PTHR10621:SF46	EXCISION REPAIR PROTEIN RAD23, PUTATIVE-RELATED	coord: 1..401
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..401
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 1.28909E-29 score: 107.643
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 269..333 e-value: 5.8E-27 score: 95.1
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 274..339
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 338..400
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 169..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g164790.m01	Csor.00g164790.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding