Csor.00g164610 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g164610
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Calmodulin, putative
Location	Csor_Chr04: 7977924 .. 7978406 (-)
RNA-Seq Expression	Csor.00g164610
Synteny	Csor.00g164610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTGCAATCCGATCAGCTCAAGCAGCTGCACGACATTTTCAGGCGCTTCGACATGAACTCCGATGGTAGCCTCACCCAGCTCGAGCTTGGCGCCCTCCTCCGCTCCCTCGGCATCAAGCCCTCTGGCGATCAACTCCATTCTCTCCTCTCCAATATGGATTCCAACGGCAACGGCTCTATCGAATTCGATGAATTGGTCAATGCGATTCTCCCCGATTTAAACGACAATATTCTCGTCAATCAAGAGCAGTTGATGGAGGTTTTCAAATCCTTTGATCGTGACGGCAATGGCTTCATCACTGCCTCCGAGCTCGCCGGTTCCATGGCTAAGATGGGTCATCCTCTGTCCTACCGCGAACTTTCCGAGATGATGCGGCAAGCCGACACCGACGGCGATGGCGTAATTAGCTTCAACGAATTCACCACCGTCATGGCCAGGTCCGCCGCAGATTTTCTCGGCCTTACATTTGCGTAG

mRNA sequence

ATGGCTTCTTTGCAATCCGATCAGCTCAAGCAGCTGCACGACATTTTCAGGCGCTTCGACATGAACTCCGATGGTAGCCTCACCCAGCTCGAGCTTGGCGCCCTCCTCCGCTCCCTCGGCATCAAGCCCTCTGGCGATCAACTCCATTCTCTCCTCTCCAATATGGATTCCAACGGCAACGGCTCTATCGAATTCGATGAATTGGTCAATGCGATTCTCCCCGATTTAAACGACAATATTCTCGTCAATCAAGAGCAGTTGATGGAGGTTTTCAAATCCTTTGATCGTGACGGCAATGGCTTCATCACTGCCTCCGAGCTCGCCGGTTCCATGGCTAAGATGGGTCATCCTCTGTCCTACCGCGAACTTTCCGAGATGATGCGGCAAGCCGACACCGACGGCGATGGCGTAATTAGCTTCAACGAATTCACCACCGTCATGGCCAGGTCCGCCGCAGATTTTCTCGGCCTTACATTTGCGTAG

Coding sequence (CDS)

ATGGCTTCTTTGCAATCCGATCAGCTCAAGCAGCTGCACGACATTTTCAGGCGCTTCGACATGAACTCCGATGGTAGCCTCACCCAGCTCGAGCTTGGCGCCCTCCTCCGCTCCCTCGGCATCAAGCCCTCTGGCGATCAACTCCATTCTCTCCTCTCCAATATGGATTCCAACGGCAACGGCTCTATCGAATTCGATGAATTGGTCAATGCGATTCTCCCCGATTTAAACGACAATATTCTCGTCAATCAAGAGCAGTTGATGGAGGTTTTCAAATCCTTTGATCGTGACGGCAATGGCTTCATCACTGCCTCCGAGCTCGCCGGTTCCATGGCTAAGATGGGTCATCCTCTGTCCTACCGCGAACTTTCCGAGATGATGCGGCAAGCCGACACCGACGGCGATGGCGTAATTAGCTTCAACGAATTCACCACCGTCATGGCCAGGTCCGCCGCAGATTTTCTCGGCCTTACATTTGCGTAG

Protein sequence

MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA

Homology

[Close]

BLAST of Csor.00g164610 vs. ExPASy Swiss-Prot
Match: Q9LI84 (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62
Identity = 121/159 (76.10%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MASLQ-SDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60
           MAS + +DQ+KQL DIF RFDM+ DGSLTQLEL ALLRSLGIKP GDQ+  LL+ +D NG
Sbjct: 1   MASTKPTDQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNG 60

Query: 61  NGSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLS 120
           NGS+EFDELV AILPD+N+ +L+NQEQLMEVF+SFDRDGNG ITA+ELAGSMAKMGHPL+
Sbjct: 61  NGSVEFDELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLT 120

Query: 121 YRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLT 159
           YREL+EMM +AD++GDGVISFNEF+ +MA+SAADFLGLT
Sbjct: 121 YRELTEMMTEADSNGDGVISFNEFSHIMAKSAADFLGLT 159

[Close]

BLAST of Csor.00g164610 vs. ExPASy Swiss-Prot
Match: Q9FZ75 (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.6e-59
Identity = 108/151 (71.52%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 7   DQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSIEFD 66
           DQ++QL DIF RFDM++DGSLT LEL ALLRSLG+KPSGDQ+H LL++MDSNGNG +EFD
Sbjct: 3   DQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD 62

Query: 67  ELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYRELSEM 126
           ELV  ILPDLN+ +L+N EQL+E+FKSFDRDGNGFI+A+ELAG+MAKMG PL+Y+EL+EM
Sbjct: 63  ELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEM 122

Query: 127 MRQADTDGDGVISFNEFTTVMARSAADFLGL 158
           +++ADT+GDGVISF EF ++MA+SA D+ GL
Sbjct: 123 IKEADTNGDGVISFGEFASIMAKSAVDYFGL 153

[Close]

BLAST of Csor.00g164610 vs. ExPASy Swiss-Prot
Match: Q6L5F4 (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.2e-54
Identity = 105/155 (67.74%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 4   LQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSI 63
           L+  QLKQL ++FRRFDMN DGSLTQLEL ALLRSLG++P+GD++H+LL+ MD+NGNGS+
Sbjct: 18  LRGSQLKQLRELFRRFDMNGDGSLTQLELAALLRSLGLRPTGDEVHALLAGMDANGNGSV 77

Query: 64  EFDELVNAILPDLNDNI-LVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYRE 123
           EFDEL  AI P L     LV+Q QL+EVF++FDRDGNGFI+A+ELA SMA++G PL++ E
Sbjct: 78  EFDELAAAIAPVLTTQTHLVDQAQLLEVFRAFDRDGNGFISAAELARSMARLGQPLTFEE 137

Query: 124 LSEMMRQADTDGDGVISFNEFTTVMARSAADFLGL 158
           L+ MMR ADTDGDGVISF EF  VMA+SA DFLG+
Sbjct: 138 LTRMMRDADTDGDGVISFKEFAAVMAKSALDFLGV 172

[Close]

BLAST of Csor.00g164610 vs. ExPASy Swiss-Prot
Match: Q5ZD81 (Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 GN=CML12 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-49
Identity = 96/161 (59.63%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 2   ASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKP-SGDQLHSLLSNMDSNGN 61
           A L+ +QL+QLH+IF RFD++ DGSLT+LEL ALLRSLG++P +GD++H+L++ +D++GN
Sbjct: 86  ARLRGEQLRQLHEIFLRFDLDGDGSLTKLELAALLRSLGLRPAAGDEIHALIAAIDADGN 145

Query: 62  GSIEFDELVNA----ILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGH 121
           G++EFDEL ++    IL     ++ V+Q +L E F++FDRDGNGFI+A+ELA SMA+MGH
Sbjct: 146 GTVEFDELASSLADLILGPCRPSVAVDQAELAEAFRAFDRDGNGFISAAELARSMARMGH 205

Query: 122 PLSYRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGL 158
           P+ Y EL++MMR+ADTDGDG+ISF EFT +MA+SA DFLGL
Sbjct: 206 PICYAELTDMMREADTDGDGLISFEEFTAIMAKSALDFLGL 246

[Close]

BLAST of Csor.00g164610 vs. ExPASy Swiss-Prot
Match: Q9AWK2 (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-40
Identity = 86/151 (56.95%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 4   LQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSI 63
           L  DQL +L +IFR FD N DGSLTQLELG+LLRSLG+KPS D+L SL+   D+N NG I
Sbjct: 57  LGDDQLGELREIFRSFDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLI 116

Query: 64  EFDELVNAILPD-LNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYRE 123
           EF E V  + P+ L D    +++Q+  +F  FDRDGNGFITA+ELA SMAK+GH L+ +E
Sbjct: 117 EFSEFVALVAPELLYDRAPYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKLGHALTVKE 176

Query: 124 LSEMMRQADTDGDGVISFNEFTTVMARSAAD 154
           L+ M+++ADTDGDG ISF EF+  +  +A D
Sbjct: 177 LTGMIKEADTDGDGRISFQEFSRAITAAAFD 207

[Close]

BLAST of Csor.00g164610 vs. NCBI nr
Match: KAG6601337.1 (putative calcium-binding protein CML16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311 bits (797), Expect = 1.04e-106
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN
Sbjct: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY
Sbjct: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA
Sbjct: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. NCBI nr
Match: XP_022987337.1 (probable calcium-binding protein CML16 [Cucurbita maxima])

HSP 1 Score: 310 bits (795), Expect = 2.09e-106
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MAS+QSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN
Sbjct: 1   MASMQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY
Sbjct: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA
Sbjct: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. NCBI nr
Match: XP_022956672.1 (probable calcium-binding protein CML16 [Cucurbita moschata])

HSP 1 Score: 310 bits (793), Expect = 4.23e-106
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN
Sbjct: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEF+ELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY
Sbjct: 61  GSIEFEELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA
Sbjct: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. NCBI nr
Match: XP_023511611.1 (probable calcium-binding protein CML16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307 bits (786), Expect = 4.94e-105
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MASLQSDQLKQLHDIF RFDMNSDGSLTQLELGALLRSLGIKPSGDQLH LLSNMDSNGN
Sbjct: 1   MASLQSDQLKQLHDIFMRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHCLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY
Sbjct: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA
Sbjct: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. NCBI nr
Match: XP_008446524.1 (PREDICTED: probable calcium-binding protein CML16 [Cucumis melo])

HSP 1 Score: 297 bits (761), Expect = 3.32e-101
Identity = 152/161 (94.41%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MASLQSD-QLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60
           MAS+QSD QLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG
Sbjct: 1   MASIQSDHQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60

Query: 61  NGSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLS 120
           NGSIEFDELVNAILPD+ND+ILVNQEQLMEVF+SFDRDGNG+ITA+ELAGSMAKMGHPL+
Sbjct: 61  NGSIEFDELVNAILPDMNDDILVNQEQLMEVFRSFDRDGNGYITAAELAGSMAKMGHPLT 120

Query: 121 YRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           YRELSEMMRQADTDGDGVISFNEFTTVMA+SAADFLGLTFA
Sbjct: 121 YRELSEMMRQADTDGDGVISFNEFTTVMAKSAADFLGLTFA 161

[Close]

BLAST of Csor.00g164610 vs. ExPASy TrEMBL
Match: A0A6J1JA36 (probable calcium-binding protein CML16 OS=Cucurbita maxima OX=3661 GN=LOC111484890 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 1.01e-106
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MAS+QSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN
Sbjct: 1   MASMQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY
Sbjct: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA
Sbjct: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. ExPASy TrEMBL
Match: A0A6J1GX12 (probable calcium-binding protein CML16 OS=Cucurbita moschata OX=3662 GN=LOC111458327 PE=4 SV=1)

HSP 1 Score: 310 bits (793), Expect = 2.05e-106
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN
Sbjct: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEF+ELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY
Sbjct: 61  GSIEFEELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA
Sbjct: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. ExPASy TrEMBL
Match: A0A1S3BF88 (probable calcium-binding protein CML16 OS=Cucumis melo OX=3656 GN=LOC103489229 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 1.61e-101
Identity = 152/161 (94.41%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MASLQSD-QLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60
           MAS+QSD QLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG
Sbjct: 1   MASIQSDHQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60

Query: 61  NGSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLS 120
           NGSIEFDELVNAILPD+ND+ILVNQEQLMEVF+SFDRDGNG+ITA+ELAGSMAKMGHPL+
Sbjct: 61  NGSIEFDELVNAILPDMNDDILVNQEQLMEVFRSFDRDGNGYITAAELAGSMAKMGHPLT 120

Query: 121 YRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           YRELSEMMRQADTDGDGVISFNEFTTVMA+SAADFLGLTFA
Sbjct: 121 YRELSEMMRQADTDGDGVISFNEFTTVMAKSAADFLGLTFA 161

[Close]

BLAST of Csor.00g164610 vs. ExPASy TrEMBL
Match: A0A0A0KUE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608150 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 4.60e-101
Identity = 151/161 (93.79%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MASLQSD-QLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60
           MAS+QSD QLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG
Sbjct: 1   MASIQSDHQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60

Query: 61  NGSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLS 120
           NGSIEFDELVNAILPD+ND+ILVNQEQLMEVF+SFDRDGNG+ITA+ELAGSMAKMGHPL+
Sbjct: 61  NGSIEFDELVNAILPDMNDDILVNQEQLMEVFRSFDRDGNGYITAAELAGSMAKMGHPLT 120

Query: 121 YRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           YRELS+MMRQADTDGDGVISFNEFTTVMA+SAADFLGLTFA
Sbjct: 121 YRELSDMMRQADTDGDGVISFNEFTTVMAKSAADFLGLTFA 161

[Close]

BLAST of Csor.00g164610 vs. ExPASy TrEMBL
Match: A0A6J1D725 (probable calcium-binding protein CML16 OS=Momordica charantia OX=3673 GN=LOC111017528 PE=4 SV=1)

HSP 1 Score: 290 bits (743), Expect = 8.61e-99
Identity = 148/160 (92.50%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60
           MAS+QSDQLKQL DIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN
Sbjct: 1   MASIQSDQLKQLQDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGN 60

Query: 61  GSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSY 120
           GSIEF+ELVNAILPD+ND+ILVNQEQL+EVF+SFDRDGNG+ITASELAGSMAKMG PLSY
Sbjct: 61  GSIEFEELVNAILPDMNDDILVNQEQLLEVFRSFDRDGNGYITASELAGSMAKMGQPLSY 120

Query: 121 RELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLTFA 160
           RELSEMMR AD DGDGVISFNEFTTVMA+SAADFLGLTFA
Sbjct: 121 RELSEMMRLADIDGDGVISFNEFTTVMAKSAADFLGLTFA 160

[Close]

BLAST of Csor.00g164610 vs. TAIR 10
Match: AT3G25600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 240.7 bits (613), Expect = 7.9e-64
Identity = 121/159 (76.10%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MASLQ-SDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNG 60
           MAS + +DQ+KQL DIF RFDM+ DGSLTQLEL ALLRSLGIKP GDQ+  LL+ +D NG
Sbjct: 1   MASTKPTDQIKQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRGDQISLLLNQIDRNG 60

Query: 61  NGSIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLS 120
           NGS+EFDELV AILPD+N+ +L+NQEQLMEVF+SFDRDGNG ITA+ELAGSMAKMGHPL+
Sbjct: 61  NGSVEFDELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLT 120

Query: 121 YRELSEMMRQADTDGDGVISFNEFTTVMARSAADFLGLT 159
           YREL+EMM +AD++GDGVISFNEF+ +MA+SAADFLGLT
Sbjct: 121 YRELTEMMTEADSNGDGVISFNEFSHIMAKSAADFLGLT 159

[Close]

BLAST of Csor.00g164610 vs. TAIR 10
Match: AT1G18530.1 (EF hand calcium-binding protein family )

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-60
Identity = 108/151 (71.52%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 7   DQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSIEFD 66
           DQ++QL DIF RFDM++DGSLT LEL ALLRSLG+KPSGDQ+H LL++MDSNGNG +EFD
Sbjct: 3   DQIRQLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFVEFD 62

Query: 67  ELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYRELSEM 126
           ELV  ILPDLN+ +L+N EQL+E+FKSFDRDGNGFI+A+ELAG+MAKMG PL+Y+EL+EM
Sbjct: 63  ELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEM 122

Query: 127 MRQADTDGDGVISFNEFTTVMARSAADFLGL 158
           +++ADT+GDGVISF EF ++MA+SA D+ GL
Sbjct: 123 IKEADTNGDGVISFGEFASIMAKSAVDYFGL 153

[Close]

BLAST of Csor.00g164610 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-39
Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 2   ASLQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNG 61
           A L  +QL +L +IFR FD N DGSLT+LELG+LLRSLG+KPS DQL +L+   D N NG
Sbjct: 11  AKLGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNG 70

Query: 62  SIEFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYR 121
            +EF E V  + PDL        +QL  +F+ FDRDGNG+ITA+ELA SMAK+GH L+  
Sbjct: 71  LVEFSEFVALVEPDL-VKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAE 130

Query: 122 ELSEMMRQADTDGDGVISFNEFTTVMARSAAD 154
           EL+ M+++AD DGDG I F EF   +  +A D
Sbjct: 131 ELTGMIKEADRDGDGCIDFQEFVQAITSAAFD 161

[Close]

BLAST of Csor.00g164610 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 78/154 (50.65%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 4   LQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSI 63
           L  +Q+ +L +IFR FD N DGSLTQLELG+LLR+LG+KPS DQ  +L+   D+  NG +
Sbjct: 9   LDEEQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSNGLV 68

Query: 64  EFDELVNAILPDL----NDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLS 123
           EF E V  + P+L           +EQL+ +F+ FD DGNGFITA+ELA SMAK+GH L+
Sbjct: 69  EFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALT 128

Query: 124 YRELSEMMRQADTDGDGVISFNEFTTVMARSAAD 154
             EL+ M+++AD+DGDG I+F EF   +  +A D
Sbjct: 129 VAELTGMIKEADSDGDGRINFQEFAKAINSAAFD 162

[Close]

BLAST of Csor.00g164610 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 121.3 bits (303), Expect = 7.0e-28
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 4   LQSDQLKQLHDIFRRFDMNSDGSLTQLELGALLRSLGIKPSGDQLHSLLSNMDSNGNGSI 63
           L  DQ+ +  + F  FD + DG +T  ELG ++RSLG  P+  +L  +++ +D++GNG+I
Sbjct: 5   LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

Query: 64  EFDELVNAILPDLNDNILVNQEQLMEVFKSFDRDGNGFITASELAGSMAKMGHPLSYREL 123
           +F E +N +   + D    ++E+L E F+ FD+D NGFI+A+EL   M  +G  LS  E+
Sbjct: 65  DFPEFLNLMARKMKDT--DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEV 124

Query: 124 SEMMRQADTDGDGVISFNEFTTVM 148
            EM+R+AD DGDG I++ EF  VM
Sbjct: 125 DEMIREADVDGDGQINYEEFVKVM 146

The following BLAST results are available for this feature:

BLAST of Csor.00g164610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI84	1.1e-62	76.10	Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 ...	[more]
Q9FZ75	2.6e-59	71.52	Probable calcium-binding protein CML15 OS=Arabidopsis thaliana OX=3702 GN=CML15 ...	[more]
Q6L5F4	7.2e-54	67.74	Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5ZD81	1.1e-49	59.63	Probable calcium-binding protein CML12 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9AWK2	1.6e-40	56.95	Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Csor.00g164610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601337.1	1.04e-106	100.00	putative calcium-binding protein CML16, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022987337.1	2.09e-106	99.38	probable calcium-binding protein CML16 [Cucurbita maxima]	[more]
XP_022956672.1	4.23e-106	99.38	probable calcium-binding protein CML16 [Cucurbita moschata]	[more]
XP_023511611.1	4.94e-105	98.75	probable calcium-binding protein CML16 [Cucurbita pepo subsp. pepo]	[more]
XP_008446524.1	3.32e-101	94.41	PREDICTED: probable calcium-binding protein CML16 [Cucumis melo]	[more]

BLAST of Csor.00g164610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA36	1.01e-106	99.38	probable calcium-binding protein CML16 OS=Cucurbita maxima OX=3661 GN=LOC1114848...	[more]
A0A6J1GX12	2.05e-106	99.38	probable calcium-binding protein CML16 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A1S3BF88	1.61e-101	94.41	probable calcium-binding protein CML16 OS=Cucumis melo OX=3656 GN=LOC103489229 P...	[more]
A0A0A0KUE0	4.60e-101	93.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608150 PE=4 SV=1	[more]
A0A6J1D725	8.61e-99	92.50	probable calcium-binding protein CML16 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Csor.00g164610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25600.1	7.9e-64	76.10	Calcium-binding EF-hand family protein	[more]
AT1G18530.1	1.8e-60	71.52	EF hand calcium-binding protein family	[more]
AT3G03000.1	2.3e-39	53.95	EF hand calcium-binding protein family	[more]
AT1G32250.1	1.3e-37	50.65	Calcium-binding EF-hand family protein	[more]
AT5G21274.1	7.0e-28	41.67	calmodulin 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 86..114 e-value: 2.9E-4 score: 30.2 coord: 122..150 e-value: 1.5E-6 score: 37.8 coord: 11..39 e-value: 0.051 score: 22.7 coord: 47..75 e-value: 1.8 score: 15.8
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 85..147 e-value: 2.1E-14 score: 53.7 coord: 10..71 e-value: 2.8E-12 score: 46.9
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 7..42 score: 13.007053
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 118..153 score: 13.704439
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 82..117 score: 14.931837
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 43..78 score: 10.217514
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 86..148 e-value: 3.95601E-18 score: 71.8101
None	No IPR available	GENE3D	1.10.238.10		coord: 83..155 e-value: 4.1E-23 score: 83.5
None	No IPR available	GENE3D	1.10.238.10		coord: 1..82 e-value: 1.8E-18 score: 68.6
None	No IPR available	PANTHER	PTHR23050:SF351	CALCIUM-BINDING PROTEIN CML15-RELATED	coord: 3..158
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 3..158
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 20..32
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 56..68
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 131..143
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 95..107
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 3..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g164610.m01	Csor.00g164610.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030234	enzyme regulator activity