Csor.00g164410 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g164410
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Tetratricopeptide-like helical domain containing protein
Location	Csor_Chr04: 8078268 .. 8079860 (-)
RNA-Seq Expression	Csor.00g164410
Synteny	Csor.00g164410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAAACGGCAGCAACCCGAAACCAGCAGTGGCTGCCGCCCTTCAGAATTGCCGCGAAACCCATCGGTTCGCTAAAACCCTAACTCCCTTTCCTTACCACGTTTCATACTGCTTTCCGATCCCTCTAACTTATCCCTATCTTTGTTGCTTTTAATTTCACGTTGTCTTAGACGAGAAATCGGCAGGGTTTTCTTCCAATCCTGCTCCCATTTCCATGCTTAGCCGTATTCATCAATGGAAGCCATTACATTTTCTCTGAGGAAATGCGGGATACTCGCTTCTTTTAGTTCTGTGATCCTTGCTAGGCCTTCAGTTTCTGCCGCCCGCCTCGAAGCGGAATCCGTCACTCCCTCCTTCGTTCTGGGCCAGAACGACCCAGTTTGTGAGATTCTTACGGGTTTAAATTCCTTTGGGTTTAGAGCGTATGTTGGTGGATGTAACTTTCGAACTGTAGTTTCTACTTTGAGTGAAACTGTAGTGGACGGCGTTCTTGAGAGTTTGAATATTCAGAATCCTGATGTTGCTGTGGCATTTTTCTATTTGTTGAGAAATAAGTACGGATTTCGGCATTCCGGATTCTCCCAGCTTGCCGTTTCTCATATTCTAGCGGGTAAAGGAAGATTCAAGGAGTTGCATTGCGTTATAAAGCAATTGGTTGAGGAGCAAGGTATCAGTTCTTGGCATCTCTTTCTTCATGATTGATTGGCTGATATTAGAGAAAAGCAGAGAAGTCGGGCATTCTCCTTCTTAACGCCTAGTGTGTATATTGGCTGAACTAAGAGATTCATAGTTATCATGATAATGTGCATACTTAAGAGTATAAAAAAAAAAAAAAAATGGTAGACTAATTCCCCACATTTTCTGCAGTTGAAAAGCACCGTGCTTTCTTTCATGCCTTCCCTGTTTCTTTGATGTATATATAAACCTCGTCTTTTAACGTACTTCTTTTAGACCATCCTTATTTTTCAGTTCATCAACCCCCCCCCCCCCCTTTTTTTTGTTAACATTGGAATGTCTATTTTATGTTGTTTATGTCTCTCGATATTTACTCTCTGGTAGGGTCGGGTTCTGCATCTTCCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTGGTATGGGATATGCTGGCATTTGCGTATTCTAGACATGAAATGATCCATGATGCCCTCTTTGTCATCGCAAAAATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTAAGGCACACTGATGTCATGTGGGATATATGCAATGAGATCAAAGCTAGTGGAGCTCCTCAGAGTGAATATACTACCTCAATACTTATACACGGCCTATGTGCGCAGTCCAAGTTACAAGATGCGATTTCATTCCTACAGGACAGCAATGAAGTAGTTGGACCTTCTATTGTGTCTATCAATACCGTTATGTCAAAGTTTTGTAAAGTGGGGCTAGTAGATGTTGCAAGGTCATTTTTCTGTTTGATGGTCAAGAATGGACTTCTTCCTGATTCGTACAGTTATAATATTCTTATTCATGGGTTATGTGTAGCAGGTTCCATGGATGA

mRNA sequence

ATGGCCGAAAACGGCAGCAACCCGAAACCAGCAGTGGCTGCCGCCCTTCAGAATTGCCGCGAAACCCATCGGCCTTCAGTTTCTGCCGCCCGCCTCGAAGCGGAATCCGTCACTCCCTCCTTCGTTCTGGGCCAGAACGACCCAGTTTGTGAGATTCTTACGGGTTTAAATTCCTTTGGGTTTAGAGCGTATGTTGGTGGATGTAACTTTCGAACTGTAGTTTCTACTTTGAGTGAAACTGTAGTGGACGGCGTTCTTGAGAGTTTGAATATTCAGAATCCTGATGTTGCTGTGGCATTTTTCTATTTGTTGAGAAATAAGTACGGATTTCGGCATTCCGGATTCTCCCAGCTTGCCGTTTCTCATATTCTAGCGGGTAAAGGAAGATTCAAGGAGTTGCATTGCGTTATAAAGCAATTGGTTGAGGAGCAAGGGTCGGGTTCTGCATCTTCCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTGGTATGGGATATGCTGGCATTTGCGTATTCTAGACATGAAATGATCCATGATGCCCTCTTTGTCATCGCAAAAATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTAAGGCACACTGATGTCATGTGGGATATATGCAATGAGATCAAAGCTAGTGGAGCTCCTCAGAGTGAATATACTACCTCAATACTTATACACGGCCTATGTGCGCAGTCCAAGTTACAAGATGCGATTTCATTCCTACAGGACAGCAATGAAGTAGTTGGACCTTCTATTGTGTCTATCAATACCGTTATGTCAAAGTTTTGTAAAGTGGGGCTAGTAGATGTTGCAAGGTTCCATGGATGA

Coding sequence (CDS)

ATGGCCGAAAACGGCAGCAACCCGAAACCAGCAGTGGCTGCCGCCCTTCAGAATTGCCGCGAAACCCATCGGCCTTCAGTTTCTGCCGCCCGCCTCGAAGCGGAATCCGTCACTCCCTCCTTCGTTCTGGGCCAGAACGACCCAGTTTGTGAGATTCTTACGGGTTTAAATTCCTTTGGGTTTAGAGCGTATGTTGGTGGATGTAACTTTCGAACTGTAGTTTCTACTTTGAGTGAAACTGTAGTGGACGGCGTTCTTGAGAGTTTGAATATTCAGAATCCTGATGTTGCTGTGGCATTTTTCTATTTGTTGAGAAATAAGTACGGATTTCGGCATTCCGGATTCTCCCAGCTTGCCGTTTCTCATATTCTAGCGGGTAAAGGAAGATTCAAGGAGTTGCATTGCGTTATAAAGCAATTGGTTGAGGAGCAAGGGTCGGGTTCTGCATCTTCCTTTTGTGACCTGCTCTTGAACAAATTCAGGAATTGGGATTCAAATGGTGTGGTATGGGATATGCTGGCATTTGCGTATTCTAGACATGAAATGATCCATGATGCCCTCTTTGTCATCGCAAAAATGAAGGATCTAAATTTACAAGCTTCAGTTCCAACTTATAACTCTCTATTGCATAACTTAAGGCACACTGATGTCATGTGGGATATATGCAATGAGATCAAAGCTAGTGGAGCTCCTCAGAGTGAATATACTACCTCAATACTTATACACGGCCTATGTGCGCAGTCCAAGTTACAAGATGCGATTTCATTCCTACAGGACAGCAATGAAGTAGTTGGACCTTCTATTGTGTCTATCAATACCGTTATGTCAAAGTTTTGTAAAGTGGGGCTAGTAGATGTTGCAAGGTTCCATGGATGA

Protein sequence

MAENGSNPKPAVAAALQNCRETHRPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARFHG

Homology

[Close]

BLAST of Csor.00g164410 vs. ExPASy Swiss-Prot
Match: Q9LMY5 (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana OX=3702 GN=At1g13630 PE=3 SV=3)

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-59
Identity = 118/267 (44.19%), Postives = 177/267 (66.29%), Query Frame = 0


Query: 24  RPSVSAARLEAESV-TPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVV 83
           + S S A+++ ES+ T +          EIL G+   GFR ++ G +FR +VS L    V
Sbjct: 27  KSSFSVAKMDDESLPTTNSTSDHRGFYKEILFGMKKIGFREFLHGYHFRGLVSELRHVHV 86

Query: 84  DGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVE 143
           + +++ L  ++ D++V FF  LR+ Y FRHS FS L VSH+LAG+ RFKEL  +++QL++
Sbjct: 87  EEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQ 146

Query: 144 EQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASV 203
           E+G     + C+LL N FR W+S G+VWDML F  SR  M+ D+L+++ KMKD NL  S 
Sbjct: 147 EEG-----TLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVST 206

Query: 204 PTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSN- 263
            +YNS+L++ R TD MWD+  EIK     ++E+T S ++ GLC Q KL+DA+ FL+ S  
Sbjct: 207 QSYNSVLYHFRETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 266

Query: 264 EVVGPSIVSINTVMSKFCKVGLVDVAR 289
           + +GPS+VS N++MS +CK+G VD+A+
Sbjct: 267 KDIGPSVVSFNSIMSGYCKLGFVDMAK 284

[Close]

BLAST of Csor.00g164410 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-12
Identity = 59/230 (25.65%), Postives = 106/230 (46.09%), Query Frame = 0


Query: 61  FRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAV-AFFYLLRNKYGFRHSGFSQLA 120
           F ++    + R V+ +LS   V  ++    +  P  ++ AFF  + ++ GFR +  +   
Sbjct: 64  FSSFTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFV 123

Query: 121 VSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSR 180
           ++  LA    F E   +I+ +V  +G  SASS   + L + R     G + D L   Y+ 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVF-ISLVEMRVTPMCGFLVDALMITYTD 183

Query: 181 HEMIHDALFVIAKMKDLNLQASVPTYNSLLH---NLRHTDVMWDICNEIKASGAPQSEYT 240
              I DA+      +       +    +LL     L  T  +W    EI  +G P + Y 
Sbjct: 184 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYV 243

Query: 241 TSILIHGLCAQSKLQDAIS-FLQDSNEVVGPSIVSINTVMSKFCKVGLVD 286
            +IL++  C +  + DA   F + +   + P++VS NT+++ +CKVG +D
Sbjct: 244 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292

[Close]

BLAST of Csor.00g164410 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09
Identity = 57/201 (28.36%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 89  LNIQNPDVAVAFFYLLRNKYGFRHSGFSQLA--VSHILAGKGRFKELHCVIKQLVEEQGS 148
           L + +  +A+ F   +  + G       QL    +HIL     +     ++K+L     S
Sbjct: 45  LRLVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKEL--SLMS 104

Query: 149 GSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYN 208
           G +S     L+  +R  +SN  V+D+L   Y R  MI D+L +   M       SV T N
Sbjct: 105 GKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 164

Query: 209 SLLHNLRHT--DV-MWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 268
           ++L ++  +  DV +W    E+          T +ILI+ LCA+   + + S+L    E 
Sbjct: 165 AILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS-SYLMQKMEK 224

Query: 269 VG--PSIVSINTVMSKFCKVG 283
            G  P+IV+ NTV+  +CK G
Sbjct: 225 SGYAPTIVTYNTVLHWYCKKG 242

[Close]

BLAST of Csor.00g164410 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.5e-09
Identity = 39/122 (31.97%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 170 WDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKA-- 229
           +++L   YS    + +AL ++  M D  +   V TYNSLL+ L  T    D+    K   
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523

Query: 230 -SGAPQSEYTTSILIHGLCAQSKLQDAISFLQD-SNEVVGPSIVSINTVMSKFCKVGLVD 288
             G   + +T +IL+  LC   KL +A+  L++  N+ V P  V+  T++  FCK G +D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

[Close]

BLAST of Csor.00g164410 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08
Identity = 58/217 (26.73%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 76  TLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHC 135
           TL+   V  VL  L  ++P +A  FF     + GF+HS  S   V+HIL     + + + 
Sbjct: 105 TLAPIWVPRVLVELK-EDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS 164

Query: 136 VIKQLVEEQGSGSASSFCDL--LLNKFRNWDSNGV-VWDMLAFAYSRHEMIHDALFVIAK 195
           V+K++V  +        CD+  +L   RN    G  V+D L        M+ +A+   +K
Sbjct: 165 VLKEMVLSKAD------CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSK 224

Query: 196 MKDLNLQASVPTYNSLLH---NLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSK 255
           MK   +     + N LLH    L  TD +     ++  +GA  + +T +I+I  +C +  
Sbjct: 225 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 284

Query: 256 LQDAISFLQDSN-EVVGPSIVSINTVMSKFCKVGLVD 286
           ++ A    ++     + P  V+ N+++  F KVG +D
Sbjct: 285 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314

[Close]

BLAST of Csor.00g164410 vs. NCBI nr
Match: KAG6601357.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 584 bits (1506), Expect = 1.92e-210
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MAENGSNPKPAVAAALQNCRETHRPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFG 60
           MAENGSNPKPAVAAALQNCRETHRPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFG
Sbjct: 1   MAENGSNPKPAVAAALQNCRETHRPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFG 60

Query: 61  FRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAV 120
           FRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAV
Sbjct: 61  FRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAV 120

Query: 121 SHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRH 180
           SHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRH
Sbjct: 121 SHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRH 180

Query: 181 EMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSIL 240
           EMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSIL
Sbjct: 181 EMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSIL 240

Query: 241 IHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARFHG 291
           IHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARFHG
Sbjct: 241 IHGLCAQSKLQDAISFLQDSNEVVGPSIVSINTVMSKFCKVGLVDVARFHG 291

[Close]

BLAST of Csor.00g164410 vs. NCBI nr
Match: XP_022956868.1 (putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata] >XP_022956869.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata] >XP_022956870.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata] >XP_022956871.1 putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucurbita moschata])

HSP 1 Score: 530 bits (1366), Expect = 3.37e-181
Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD
Sbjct: 30  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
           GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE
Sbjct: 90  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFV+AKMKDLNLQASVP
Sbjct: 150 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVVAKMKDLNLQASVP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV
Sbjct: 210 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVSINTVMSKFCKVGLVDVAR
Sbjct: 270 VGPSIVSINTVMSKFCKVGLVDVAR 294

[Close]

BLAST of Csor.00g164410 vs. NCBI nr
Match: KAG7032140.1 (putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 530 bits (1366), Expect = 1.03e-180
Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD
Sbjct: 30  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
           GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE
Sbjct: 90  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFV+AKMKDLNLQASVP
Sbjct: 150 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVVAKMKDLNLQASVP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV
Sbjct: 210 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVSINTVMSKFCKVGLVDVAR
Sbjct: 270 VGPSIVSINTVMSKFCKVGLVDVAR 294

[Close]

BLAST of Csor.00g164410 vs. NCBI nr
Match: XP_023536817.1 (putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536825.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536834.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536842.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo] >XP_023536850.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524 bits (1349), Expect = 1.23e-178
Identity = 262/265 (98.87%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPSVSAARLEAESVTPSFVLGQNDPV EILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD
Sbjct: 30  RPSVSAARLEAESVTPSFVLGQNDPVREILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
           GVLESL+IQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE
Sbjct: 90  GVLESLSIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP
Sbjct: 150 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTDVMWDICNE+KASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV
Sbjct: 210 TYNSLLHNLRHTDVMWDICNEVKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVSINTVMSKFCKVGLVDVAR
Sbjct: 270 VGPSIVSINTVMSKFCKVGLVDVAR 294

[Close]

BLAST of Csor.00g164410 vs. NCBI nr
Match: XP_022977564.1 (putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima] >XP_022977572.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima] >XP_022977580.1 putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima])

HSP 1 Score: 511 bits (1317), Expect = 8.21e-174
Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPSVS+ARLEAESVTPSFVLGQNDPV EILTGLNSFGFRAYVGG NF+TVVSTLSETVVD
Sbjct: 30  RPSVSSARLEAESVTPSFVLGQNDPVREILTGLNSFGFRAYVGGRNFQTVVSTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
           GVLESL IQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKEL CVIKQLVEE
Sbjct: 90  GVLESLTIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELRCVIKQLVEE 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP
Sbjct: 150 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQ+AISFLQDSNEV
Sbjct: 210 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQNAISFLQDSNEV 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVSINTVMSKFCKVGLVDVAR
Sbjct: 270 VGPSIVSINTVMSKFCKVGLVDVAR 294

[Close]

BLAST of Csor.00g164410 vs. ExPASy TrEMBL
Match: A0A6J1H0A7 (putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458429 PE=4 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 1.63e-181
Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD
Sbjct: 30  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
           GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE
Sbjct: 90  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFV+AKMKDLNLQASVP
Sbjct: 150 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVVAKMKDLNLQASVP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV
Sbjct: 210 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVSINTVMSKFCKVGLVDVAR
Sbjct: 270 VGPSIVSINTVMSKFCKVGLVDVAR 294

[Close]

BLAST of Csor.00g164410 vs. ExPASy TrEMBL
Match: A0A6J1IIW4 (putative pentatricopeptide repeat-containing protein At1g13630 OS=Cucurbita maxima OX=3661 GN=LOC111477855 PE=4 SV=1)

HSP 1 Score: 511 bits (1317), Expect = 3.97e-174
Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPSVS+ARLEAESVTPSFVLGQNDPV EILTGLNSFGFRAYVGG NF+TVVSTLSETVVD
Sbjct: 30  RPSVSSARLEAESVTPSFVLGQNDPVREILTGLNSFGFRAYVGGRNFQTVVSTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
           GVLESL IQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKEL CVIKQLVEE
Sbjct: 90  GVLESLTIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELRCVIKQLVEE 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP
Sbjct: 150 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQ+AISFLQDSNEV
Sbjct: 210 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQNAISFLQDSNEV 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVSINTVMSKFCKVGLVDVAR
Sbjct: 270 VGPSIVSINTVMSKFCKVGLVDVAR 294

[Close]

BLAST of Csor.00g164410 vs. ExPASy TrEMBL
Match: A0A1S3CNC6 (putative pentatricopeptide repeat-containing protein At1g13630 OS=Cucumis melo OX=3656 GN=LOC103502754 PE=4 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 7.14e-151
Identity = 225/263 (85.55%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 26  SVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGV 85
           SVSAARLE  +VT SF   QND V EILTGLNS GFRAYVGGCNFRTVVSTLSETVVDGV
Sbjct: 27  SVSAARLEPATVTTSFFPDQNDSVREILTGLNSLGFRAYVGGCNFRTVVSTLSETVVDGV 86

Query: 86  LESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQG 145
           L+SL    PDVAVAFFYLL N+YGFRHS FSQ  VSHILAG+GRFKELH VIK L+EEQG
Sbjct: 87  LDSLRTLKPDVAVAFFYLLINEYGFRHSRFSQFVVSHILAGEGRFKELHSVIKHLIEEQG 146

Query: 146 SGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTY 205
            GSAS+FCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFV AKMKDLNLQASVPTY
Sbjct: 147 LGSASTFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVFAKMKDLNLQASVPTY 206

Query: 206 NSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEVVG 265
           NSLLHNLRHTD++WD+ NEIK SGAPQSEYTTSILIHGLC QSK++DAISFLQDSNEVVG
Sbjct: 207 NSLLHNLRHTDIIWDVYNEIKVSGAPQSEYTTSILIHGLCEQSKIEDAISFLQDSNEVVG 266

Query: 266 PSIVSINTVMSKFCKVGLVDVAR 288
           PS VSINT+MSKFCKVGL+DVAR
Sbjct: 267 PSTVSINTIMSKFCKVGLIDVAR 289

[Close]

BLAST of Csor.00g164410 vs. ExPASy TrEMBL
Match: A0A5D3DRM7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2256G00140 PE=4 SV=1)

HSP 1 Score: 452 bits (1162), Expect = 7.14e-151
Identity = 225/263 (85.55%), Postives = 238/263 (90.49%), Query Frame = 0


Query: 26  SVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGV 85
           SVSAARLE  +VT SF   QND V EILTGLNS GFRAYVGGCNFRTVVSTLSETVVDGV
Sbjct: 27  SVSAARLEPATVTTSFFPDQNDSVREILTGLNSLGFRAYVGGCNFRTVVSTLSETVVDGV 86

Query: 86  LESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQG 145
           L+SL    PDVAVAFFYLL N+YGFRHS FSQ  VSHILAG+GRFKELH VIK L+EEQG
Sbjct: 87  LDSLRTLKPDVAVAFFYLLINEYGFRHSRFSQFVVSHILAGEGRFKELHSVIKHLIEEQG 146

Query: 146 SGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTY 205
            GSAS+FCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFV AKMKDLNLQASVPTY
Sbjct: 147 LGSASTFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVFAKMKDLNLQASVPTY 206

Query: 206 NSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEVVG 265
           NSLLHNLRHTD++WD+ NEIK SGAPQSEYTTSILIHGLC QSK++DAISFLQDSNEVVG
Sbjct: 207 NSLLHNLRHTDIIWDVYNEIKVSGAPQSEYTTSILIHGLCEQSKIEDAISFLQDSNEVVG 266

Query: 266 PSIVSINTVMSKFCKVGLVDVAR 288
           PS VSINT+MSKFCKVGL+DVAR
Sbjct: 267 PSTVSINTIMSKFCKVGLIDVAR 289

[Close]

BLAST of Csor.00g164410 vs. ExPASy TrEMBL
Match: A0A6J1D5Y2 (putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017579 PE=4 SV=1)

HSP 1 Score: 432 bits (1110), Expect = 4.88e-143
Identity = 214/265 (80.75%), Postives = 234/265 (88.30%), Query Frame = 0


Query: 24  RPSVSAARLEAESVTPSFVLGQNDPVCEILTGLNSFGFRAYVGGCNFRTVVSTLSETVVD 83
           RPS SAA LE ES+  S VL QNDPV EILTGLN FGF AY GGCNFRT+V TLSETVVD
Sbjct: 30  RPSASAAHLEEESI--SIVLSQNDPVREILTGLNFFGFGAYTGGCNFRTIVPTLSETVVD 89

Query: 84  GVLESLNIQNPDVAVAFFYLLRNKYGFRHSGFSQLAVSHILAGKGRFKELHCVIKQLVEE 143
            V+ SL  +N D AVAFFYLLRN+Y FRHS FSQ AVSHILAGK RFKELH V+KQL+E+
Sbjct: 90  DVIGSLKTRNTDFAVAFFYLLRNEYMFRHSEFSQFAVSHILAGKRRFKELHSVMKQLLED 149

Query: 144 QGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVP 203
           QGSGSA SFCDLLLNKFRNWDSNGVVWDMLAFAYSRH+MIHDALFVIAKMK LNLQAS+P
Sbjct: 150 QGSGSAPSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHQMIHDALFVIAKMKGLNLQASIP 209

Query: 204 TYNSLLHNLRHTDVMWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 263
           TYNSLLHNLRHTD+MWDI NEIK SG PQSEYT+SIL+HGLC QSKL+DAISFL+DS+E 
Sbjct: 210 TYNSLLHNLRHTDIMWDIYNEIKVSGTPQSEYTSSILVHGLCEQSKLRDAISFLEDSDEA 269

Query: 264 VGPSIVSINTVMSKFCKVGLVDVAR 288
           VGPSIVS NT+MSKFCK+GL+DVA+
Sbjct: 270 VGPSIVSFNTIMSKFCKMGLIDVAK 292

[Close]

BLAST of Csor.00g164410 vs. TAIR 10
Match: AT1G13630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-56
Identity = 108/239 (45.19%), Postives = 160/239 (66.95%), Query Frame = 0


Query: 51  EILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGF 110
           EIL G+   GFR ++ G +FR +VS L    V+ +++ L  ++ D++V FF  LR+ Y F
Sbjct: 21  EILFGMKKIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAF 80

Query: 111 RHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVW 170
           RHS FS L VSH+LAG+ RFKEL  +++QL++E+G+             FR W+S G+VW
Sbjct: 81  RHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT-------------FRKWESTGLVW 140

Query: 171 DMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGA 230
           DML F  SR  M+ D+L+++ KMKD NL  S  +YNS+L++ R TD MWD+  EIK    
Sbjct: 141 DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK---- 200

Query: 231 PQSEYTTSILIHGLCAQSKLQDAISFLQDSN-EVVGPSIVSINTVMSKFCKVGLVDVAR 289
            ++E+T S ++ GLC Q KL+DA+ FL+ S  + +GPS+VS N++MS +CK+G VD+A+
Sbjct: 201 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAK 242

[Close]

BLAST of Csor.00g164410 vs. TAIR 10
Match: AT1G13630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-56
Identity = 108/239 (45.19%), Postives = 160/239 (66.95%), Query Frame = 0


Query: 51  EILTGLNSFGFRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAVAFFYLLRNKYGF 110
           EIL G+   GFR ++ G +FR +VS L    V+ +++ L  ++ D++V FF  LR+ Y F
Sbjct: 21  EILFGMKKIGFREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAF 80

Query: 111 RHSGFSQLAVSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVW 170
           RHS FS L VSH+LAG+ RFKEL  +++QL++E+G+             FR W+S G+VW
Sbjct: 81  RHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT-------------FRKWESTGLVW 140

Query: 171 DMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKASGA 230
           DML F  SR  M+ D+L+++ KMKD NL  S  +YNS+L++ R TD MWD+  EIK    
Sbjct: 141 DMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIK---- 200

Query: 231 PQSEYTTSILIHGLCAQSKLQDAISFLQDSN-EVVGPSIVSINTVMSKFCKVGLVDVAR 289
            ++E+T S ++ GLC Q KL+DA+ FL+ S  + +GPS+VS N++MS +CK+G VD+A+
Sbjct: 201 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAK 242

[Close]

BLAST of Csor.00g164410 vs. TAIR 10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-13
Identity = 59/230 (25.65%), Postives = 106/230 (46.09%), Query Frame = 0


Query: 61  FRAYVGGCNFRTVVSTLSETVVDGVLESLNIQNPDVAV-AFFYLLRNKYGFRHSGFSQLA 120
           F ++    + R V+ +LS   V  ++    +  P  ++ AFF  + ++ GFR +  +   
Sbjct: 64  FSSFTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFV 123

Query: 121 VSHILAGKGRFKELHCVIKQLVEEQGSGSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSR 180
           ++  LA    F E   +I+ +V  +G  SASS   + L + R     G + D L   Y+ 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVF-ISLVEMRVTPMCGFLVDALMITYTD 183

Query: 181 HEMIHDALFVIAKMKDLNLQASVPTYNSLLH---NLRHTDVMWDICNEIKASGAPQSEYT 240
              I DA+      +       +    +LL     L  T  +W    EI  +G P + Y 
Sbjct: 184 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYV 243

Query: 241 TSILIHGLCAQSKLQDAIS-FLQDSNEVVGPSIVSINTVMSKFCKVGLVD 286
            +IL++  C +  + DA   F + +   + P++VS NT+++ +CKVG +D
Sbjct: 244 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292

[Close]

BLAST of Csor.00g164410 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10
Identity = 57/201 (28.36%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 89  LNIQNPDVAVAFFYLLRNKYGFRHSGFSQLA--VSHILAGKGRFKELHCVIKQLVEEQGS 148
           L + +  +A+ F   +  + G       QL    +HIL     +     ++K+L     S
Sbjct: 85  LRLVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKEL--SLMS 144

Query: 149 GSASSFCDLLLNKFRNWDSNGVVWDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYN 208
           G +S     L+  +R  +SN  V+D+L   Y R  MI D+L +   M       SV T N
Sbjct: 145 GKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCN 204

Query: 209 SLLHNLRHT--DV-MWDICNEIKASGAPQSEYTTSILIHGLCAQSKLQDAISFLQDSNEV 268
           ++L ++  +  DV +W    E+          T +ILI+ LCA+   + + S+L    E 
Sbjct: 205 AILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS-SYLMQKMEK 264

Query: 269 VG--PSIVSINTVMSKFCKVG 283
            G  P+IV+ NTV+  +CK G
Sbjct: 265 SGYAPTIVTYNTVLHWYCKKG 282

[Close]

BLAST of Csor.00g164410 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 5.3e-10
Identity = 39/122 (31.97%), Postives = 62/122 (50.82%), Query Frame = 0


Query: 170 WDMLAFAYSRHEMIHDALFVIAKMKDLNLQASVPTYNSLLHNLRHTDVMWDICNEIKA-- 229
           +++L   YS    + +AL ++  M D  +   V TYNSLL+ L  T    D+    K   
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523

Query: 230 -SGAPQSEYTTSILIHGLCAQSKLQDAISFLQD-SNEVVGPSIVSINTVMSKFCKVGLVD 288
             G   + +T +IL+  LC   KL +A+  L++  N+ V P  V+  T++  FCK G +D
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

The following BLAST results are available for this feature:

BLAST of Csor.00g164410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMY5	1.6e-59	44.19	Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis th...	[more]
O04491	5.6e-12	25.65	Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th...	[more]
Q9LVQ5	4.4e-09	28.36	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
Q9CA58	7.5e-09	31.97	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
P0C894	1.7e-08	26.73	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]

BLAST of Csor.00g164410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601357.1	1.92e-210	100.00	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022956868.1	3.37e-181	99.62	putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 [Cucur...	[more]
KAG7032140.1	1.03e-180	99.62	putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma sub...	[more]
XP_023536817.1	1.23e-178	98.87	putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita pepo s...	[more]
XP_022977564.1	8.21e-174	97.36	putative pentatricopeptide repeat-containing protein At1g13630 [Cucurbita maxima...	[more]

BLAST of Csor.00g164410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0A7	1.63e-181	99.62	putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 OS=Cuc...	[more]
A0A6J1IIW4	3.97e-174	97.36	putative pentatricopeptide repeat-containing protein At1g13630 OS=Cucurbita maxi...	[more]
A0A1S3CNC6	7.14e-151	85.55	putative pentatricopeptide repeat-containing protein At1g13630 OS=Cucumis melo O...	[more]
A0A5D3DRM7	7.14e-151	85.55	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1D5Y2	4.88e-143	80.75	putative pentatricopeptide repeat-containing protein At1g13630 isoform X1 OS=Mom...	[more]

BLAST of Csor.00g164410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13630.1	1.7e-56	45.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G13630.2	1.7e-56	45.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G09680.1	4.0e-13	25.65	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G55840.1	3.1e-10	28.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74580.1	5.3e-10	31.97	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 71..213 e-value: 4.9E-10 score: 41.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 214..289 e-value: 3.6E-8 score: 35.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 168..197 e-value: 0.57 score: 10.6
None	No IPR available	PANTHER	PTHR47934:SF9	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 21..288
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 21..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g164410.m01	Csor.00g164410.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding