Csor.00g163500 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g163500
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr13: 6397886 .. 6398812 (+)
RNA-Seq Expression	Csor.00g163500
Synteny	Csor.00g163500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAACCACAAGACATAATCCCCTTCTACGCCGCTCTCCTCCAAGCATGCTCCTCCACCAAGAACCACCGCACCCTCAAGCAAATCCACGCTCTAACCATCCGACTCGGAATCTCTCACCATGATTTCATTCGAACCAAGCTTGCCTCCACCTACGCCGCCTGCCACCATCTCCCACAAGCCACTACCATCTTCTCCTTCGCCACTCGCCGCCCCACCTTCCTCTTTAATGCCCTCATCAGAGCCCACTCCTCTCTGCGTCTCTTCTCCCAATCACTCTCGATTTTCCGCCACATGCTTCTTTCTGGAAAGCCCATTGACCGTCATACTTTACCGCCGGTGATCAAGTCATGTACGGGGCTCTCGTCCTTGCGCCTTGGCCGGCAGGTTCATGGGGCTGTTGTGATTAATGGGTTCTCCACCGATTTGCCGAATTTGAATGCGTTGATTACGATGTATGGCAAGTGCGGGGACTTGGGTGTTGCACGGAAAGTGTTCGATGGAATGCCTGAGAGAAATGAGGTGTCGTGGTCTGCGTTGATGGCGGGTTATGGTGTTCATGGGATGTTTAGTGAGGTGTTTGGATTGTTTGAGAGGATGGTGGAAGAGGGACAAAAGCCGGATGAGCTCACTTTTACAGCTCTTCTCACGGCATGTAGCCATGGAGGGTTGATTGAGAGGGGGAAGGAGTATTTTGGTATGATGGAAATGGGGTTCGATTTGAGGCCTGGGTTGGAGCATTACACCTGCATGGTGGATTTGCTGGGAAGGGTGGGACAAGTGGAAGAAGCAGAGAAGTTGATCATGGAGATGGAGATTGAGCCTGATGAGGCATTGTGGGGCGCCCTGCTGAGTGCTTGTAGGATTCATGGGAAAGCCGAGGTGGCTGATAGGGTGCAAACACGGTTTATTAAGCAACACTGA

mRNA sequence

ATGCCCAAACCACAAGACATAATCCCCTTCTACGCCGCTCTCCTCCAAGCATGCTCCTCCACCAAGAACCACCGCACCCTCAAGCAAATCCACGCTCTAACCATCCGACTCGGAATCTCTCACCATGATTTCATTCGAACCAAGCTTGCCTCCACCTACGCCGCCTGCCACCATCTCCCACAAGCCACTACCATCTTCTCCTTCGCCACTCGCCGCCCCACCTTCCTCTTTAATGCCCTCATCAGAGCCCACTCCTCTCTGCGTCTCTTCTCCCAATCACTCTCGATTTTCCGCCACATGCTTCTTTCTGGAAAGCCCATTGACCGTCATACTTTACCGCCGGTGATCAAGTCATGTACGGGGCTCTCGTCCTTGCGCCTTGGCCGGCAGGTTCATGGGGCTGTTGTGATTAATGGGTTCTCCACCGATTTGCCGAATTTGAATGCGTTGATTACGATGTATGGCAAGTGCGGGGACTTGGGTGTTGCACGGAAAGTGTTCGATGGAATGCCTGAGAGAAATGAGGTGTCGTGGTCTGCGTTGATGGCGGGTTATGGTGTTCATGGGATGTTTAGTGAGGTGTTTGGATTGTTTGAGAGGATGGTGGAAGAGGGACAAAAGCCGGATGAGCTCACTTTTACAGCTCTTCTCACGGCATGTAGCCATGGAGGGTTGATTGAGAGGGGGAAGGAGTATTTTGGTATGATGGAAATGGGGTTCGATTTGAGGCCTGGGTTGGAGCATTACACCTGCATGGTGGATTTGCTGGGAAGGGTGGGACAAGTGGAAGAAGCAGAGAAGTTGATCATGGAGATGGAGATTGAGCCTGATGAGGCATTGTGGGGCGCCCTGCTGAGTGCTTGTAGGATTCATGGGAAAGCCGAGGTGGCTGATAGGGTGCAAACACGGTTTATTAAGCAACACTGA

Coding sequence (CDS)

ATGCCCAAACCACAAGACATAATCCCCTTCTACGCCGCTCTCCTCCAAGCATGCTCCTCCACCAAGAACCACCGCACCCTCAAGCAAATCCACGCTCTAACCATCCGACTCGGAATCTCTCACCATGATTTCATTCGAACCAAGCTTGCCTCCACCTACGCCGCCTGCCACCATCTCCCACAAGCCACTACCATCTTCTCCTTCGCCACTCGCCGCCCCACCTTCCTCTTTAATGCCCTCATCAGAGCCCACTCCTCTCTGCGTCTCTTCTCCCAATCACTCTCGATTTTCCGCCACATGCTTCTTTCTGGAAAGCCCATTGACCGTCATACTTTACCGCCGGTGATCAAGTCATGTACGGGGCTCTCGTCCTTGCGCCTTGGCCGGCAGGTTCATGGGGCTGTTGTGATTAATGGGTTCTCCACCGATTTGCCGAATTTGAATGCGTTGATTACGATGTATGGCAAGTGCGGGGACTTGGGTGTTGCACGGAAAGTGTTCGATGGAATGCCTGAGAGAAATGAGGTGTCGTGGTCTGCGTTGATGGCGGGTTATGGTGTTCATGGGATGTTTAGTGAGGTGTTTGGATTGTTTGAGAGGATGGTGGAAGAGGGACAAAAGCCGGATGAGCTCACTTTTACAGCTCTTCTCACGGCATGTAGCCATGGAGGGTTGATTGAGAGGGGGAAGGAGTATTTTGGTATGATGGAAATGGGGTTCGATTTGAGGCCTGGGTTGGAGCATTACACCTGCATGGTGGATTTGCTGGGAAGGGTGGGACAAGTGGAAGAAGCAGAGAAGTTGATCATGGAGATGGAGATTGAGCCTGATGAGGCATTGTGGGGCGCCCTGCTGAGTGCTTGTAGGATTCATGGGAAAGCCGAGGTGGCTGATAGGGTGCAAACACGGTTTATTAAGCAACACTGA

Protein sequence

MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRVQTRFIKQH

Homology

[Close]

BLAST of Csor.00g163500 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-57
Identity = 115/299 (38.46%), Postives = 175/299 (58.53%), Query Frame = 0


Query: 11  YAALLQAC---SSTKNHRTL-KQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIF 70
           Y  +L+AC     T NH    K+IHA   R G S H +I T L   YA    +  A+ +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 71  SFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRH--TLPPVIKSCTGLSS 130
                R    ++A+I  ++      ++L  FR M+   K    +  T+  V+++C  L++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 131 LRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 190
           L  G+ +HG ++  G  + LP ++AL+TMYG+CG L V ++VFD M +R+ VSW++L++ 
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 191 YGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRP 250
           YGVHG   +   +FE M+  G  P  +TF ++L ACSH GL+E GK  F  M     ++P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 251 GLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRVQTR 304
            +EHY CMVDLLGR  +++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R   R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479

[Close]

BLAST of Csor.00g163500 vs. ExPASy Swiss-Prot
Match: Q9LND4 (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.5e-55
Identity = 104/293 (35.49%), Postives = 167/293 (57.00%), Query Frame = 0


Query: 14  LLQACSSTKNHRTLKQIHALTIRLG-ISHHDFIRTKLASTYAACHHLPQATTIFSFATRR 73
           L++AC +    +  K +H ++IR   I   D+++  +   Y  C  L  A  +F  +  R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275

Query: 74  PTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVH 133
              ++  LI   +      ++  +FR ML      ++ TL  ++ SC+ L SLR G+ VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335

Query: 134 GAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFS 193
           G ++ NG   D  N  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F 
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395

Query: 194 EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCM 253
           E    F +M  +   P+ +TF +LL+ACSH G ++ G + F  M   + + P  EHY CM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455

Query: 254 VDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRVQTRFI 306
           VDLLGR G++ EA+  I  M ++P  + WGALLSACRIH + ++A  +  + +
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL 508

[Close]

BLAST of Csor.00g163500 vs. ExPASy Swiss-Prot
Match: Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-53
Identity = 106/295 (35.93%), Postives = 165/295 (55.93%), Query Frame = 0


Query: 13  ALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIFSFATRR 72
           +LL ACS  K+ R  K++H   IR  +    F+   + S Y  C  L     +F     +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 73  PTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVH 132
               +N +I  +       ++L +FR M+L G  +   ++ PV  +C+ L SLRLGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 133 GAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFS 192
              + +    D     +LI MY K G +  + KVF+G+ E++  SW+A++ GYG+HG+  
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 193 EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCM 252
           E   LFE M   G  PD+LTF  +LTAC+H GLI  G  Y   M+  F L+P L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 253 VDLLGRVGQVEEAEKLIM-EMEIEPDEALWGALLSACRIHGKAEVADRVQTRFIK 307
           +D+LGR GQ+++A +++  EM  E D  +W +LLS+CRIH   E+ ++V  +  +
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795

[Close]

BLAST of Csor.00g163500 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.1e-53
Identity = 110/283 (38.87%), Postives = 160/283 (56.54%), Query Frame = 0


Query: 14  LLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIFSFATRRP 73
           +L ACS        KQ+H+  ++LG   H F  T L   YA    L  A   F     R 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 74  TFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVHG 133
             L+ +LI  +       ++L ++R M  +G   +  T+  V+K+C+ L++L LG+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 134 AVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFSE 193
             + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 194 VFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCMV 253
              LFE M+ EG +PD++TF  +++ACSH G +ERG  YF MM     L P ++HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 254 DLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEV 297
           DLL R GQ++EA++ I    I+    LW  LLSAC+ HGK E+
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

[Close]

BLAST of Csor.00g163500 vs. ExPASy Swiss-Prot
Match: P0C8Q2 (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.0e-53
Identity = 108/299 (36.12%), Postives = 168/299 (56.19%), Query Frame = 0


Query: 5   QDIIPFYAALLQACSSTKNHRTLKQ---IHALTIRLGISHHDFIRTKLASTYAACHHLPQ 64
           ++  P  +  +   +S +N  TL Q   IH+  I LG            S Y+       
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309

Query: 65  ATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTG 124
           A  +F   T R    +  +I  ++      ++L++F  M+ SG+  D  TL  +I  C  
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369

Query: 125 LSSLRLGRQVHGAVVINGFSTD-LPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 184
             SL  G+ +     I G   D +   NALI MY KCG +  AR +FD  PE+  V+W+ 
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429

Query: 185 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 244
           ++AGY ++G+F E   LF +M++   KP+ +TF A+L AC+H G +E+G EYF +M+  +
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489

Query: 245 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADR 300
           ++ PGL+HY+CMVDLLGR G++EEA +LI  M  +PD  +WGALL+AC+IH   ++A++
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQ 548

[Close]

BLAST of Csor.00g163500 vs. NCBI nr
Match: KAG6583697.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 627 bits (1618), Expect = 6.04e-227
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF
Sbjct: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
           DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300

Query: 301 QTRFIKQH 308
           QTRFIKQH
Sbjct: 301 QTRFIKQH 308

[Close]

BLAST of Csor.00g163500 vs. NCBI nr
Match: KAG7019344.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 626 bits (1615), Expect = 1.73e-226
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF
Sbjct: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
           DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300

Query: 301 QTRFIKQH 308
           QTRF+KQH
Sbjct: 301 QTRFMKQH 308

[Close]

BLAST of Csor.00g163500 vs. NCBI nr
Match: XP_023520705.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620 bits (1598), Expect = 6.77e-224
Identity = 302/308 (98.05%), Postives = 306/308 (99.35%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHML+SGKPIDRHTLPPV+KSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLVSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGF
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
           DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALL ACRIHGKAEVADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLGACRIHGKAEVADRV 300

Query: 301 QTRFIKQH 308
           QTRF+KQH
Sbjct: 301 QTRFMKQH 308

[Close]

BLAST of Csor.00g163500 vs. NCBI nr
Match: XP_022927399.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 619 bits (1596), Expect = 1.37e-223
Identity = 303/308 (98.38%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFR MLLSGKPIDRHTLPPVIKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRRMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGF
Sbjct: 181 LMAGYGVHGMFDEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMQMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
           DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGK EVADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKGEVADRV 300

Query: 301 QTRFIKQH 308
           QTRF+KQH
Sbjct: 301 QTRFMKQH 308

[Close]

BLAST of Csor.00g163500 vs. NCBI nr
Match: XP_022973156.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 606 bits (1563), Expect = 1.58e-218
Identity = 298/310 (96.13%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNH TLKQIHALTIRLGISHHDFIRTKLASTYAAC HLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHHTLKQIHALTIRLGISHHDFIRTKLASTYAACDHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPV+KSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHG VVINGFSTDLPNLNALITMYGKCGDLG+ARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGFVVINGFSTDLPNLNALITMYGKCGDLGIARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGF
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEME--IEPDEALWGALLSACRIHGKAEVAD 300
           +L+PGLEHYTCMVDLLGRVGQVEEAEKLIMEME  IEPDEALWGALLSACRIHGKAEVAD
Sbjct: 241 NLKPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEMEIEPDEALWGALLSACRIHGKAEVAD 300

Query: 301 RVQTRFIKQH 308
           RVQTRF+KQH
Sbjct: 301 RVQTRFMKQH 310

[Close]

BLAST of Csor.00g163500 vs. ExPASy TrEMBL
Match: A0A6J1EHW3 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434233 PE=4 SV=1)

HSP 1 Score: 619 bits (1596), Expect = 6.62e-224
Identity = 303/308 (98.38%), Postives = 305/308 (99.03%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFR MLLSGKPIDRHTLPPVIKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRRMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGF
Sbjct: 181 LMAGYGVHGMFDEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMQMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
           DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGK EVADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKGEVADRV 300

Query: 301 QTRFIKQH 308
           QTRF+KQH
Sbjct: 301 QTRFMKQH 308

[Close]

BLAST of Csor.00g163500 vs. ExPASy TrEMBL
Match: A0A6J1I7X0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111471666 PE=4 SV=1)

HSP 1 Score: 606 bits (1563), Expect = 7.65e-219
Identity = 298/310 (96.13%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKPQDIIPFYAALLQACSSTKNH TLKQIHALTIRLGISHHDFIRTKLASTYAAC HLP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHHTLKQIHALTIRLGISHHDFIRTKLASTYAACDHLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPV+KSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHG VVINGFSTDLPNLNALITMYGKCGDLG+ARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGFVVINGFSTDLPNLNALITMYGKCGDLGIARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMM+MGF
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEME--IEPDEALWGALLSACRIHGKAEVAD 300
           +L+PGLEHYTCMVDLLGRVGQVEEAEKLIMEME  IEPDEALWGALLSACRIHGKAEVAD
Sbjct: 241 NLKPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEMEIEPDEALWGALLSACRIHGKAEVAD 300

Query: 301 RVQTRFIKQH 308
           RVQTRF+KQH
Sbjct: 301 RVQTRFMKQH 310

[Close]

BLAST of Csor.00g163500 vs. ExPASy TrEMBL
Match: A0A0A0K1F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041310 PE=4 SV=1)

HSP 1 Score: 559 bits (1441), Expect = 2.80e-200
Identity = 275/307 (89.58%), Postives = 286/307 (93.16%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKP +IIPFYAALL ACSST N  TLKQIHALTI L ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QATTIFSFATRRPT+LFN LIRAHSSLRLFSQSLSIFRHMLLSGK IDRHTLPPV+KSCT
Sbjct: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGA++INGFS DLP+LNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVF LFERMVEEGQKPDELTFT+LLTACSHGGLIE+GKEYFGMM M F
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
            LRPGL+HYTCMVDLLGR GQVEEAEKLIMEMEIEPDEALWGA+LSACRIHGK +VADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300

Query: 301 QTRFIKQ 307
           Q RFIKQ
Sbjct: 301 QKRFIKQ 307

[Close]

BLAST of Csor.00g163500 vs. ExPASy TrEMBL
Match: A0A6J1CNN2 (pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111012761 PE=4 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 2.99e-195
Identity = 268/306 (87.58%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MP  Q  +PFYAALL+ACSSTKN  +L+QIHALTIRL ISHHDFIRTKL S+YAAC  L 
Sbjct: 1   MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLR 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFR MLLSGKPIDRHTLP V+KSCT
Sbjct: 61  QATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTLPLVLKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLGVARKVFD MPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHG F EVFGLFERMVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM MGF
Sbjct: 181 LMAGYGVHGKFGEVFGLFERMVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
           DLRPGLEHYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGALLSACRIHGKAEVADR+
Sbjct: 241 DLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL 300

Query: 301 QTRFIK 306
           Q RFI+
Sbjct: 301 QKRFIE 306

[Close]

BLAST of Csor.00g163500 vs. ExPASy TrEMBL
Match: A0A5A7UT42 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold786G00080 PE=4 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 9.97e-194
Identity = 266/307 (86.64%), Postives = 283/307 (92.18%), Query Frame = 0


Query: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60
           MPKP +IIPFYAALL+ACSSTKN  TLKQIHALTI L ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCT 120
           QA TIFSFATRRPT+LFNALIRAHSSLRLFSQSLSIFRHMLLSGK  DRHT P V+KSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGA++INGFS DLP+LNALITMY KCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 240
           LMAGYGVHGMF EVF LFERMV+EGQ+PDELTFT+LLTACSHGGLIE+GKEYF  M M F
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRV 300
            LRPGL+HYTCMVDLLGR+GQVEEAEKLIMEME+EPDEALWGA+LSACRIHG+ +VADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QTRFIKQ 307
           Q RFIKQ
Sbjct: 301 QKRFIKQ 307

[Close]

BLAST of Csor.00g163500 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-58
Identity = 115/299 (38.46%), Postives = 175/299 (58.53%), Query Frame = 0


Query: 11  YAALLQAC---SSTKNHRTL-KQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIF 70
           Y  +L+AC     T NH    K+IHA   R G S H +I T L   YA    +  A+ +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 71  SFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRH--TLPPVIKSCTGLSS 130
                R    ++A+I  ++      ++L  FR M+   K    +  T+  V+++C  L++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 131 LRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 190
           L  G+ +HG ++  G  + LP ++AL+TMYG+CG L V ++VFD M +R+ VSW++L++ 
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 191 YGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRP 250
           YGVHG   +   +FE M+  G  P  +TF ++L ACSH GL+E GK  F  M     ++P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 251 GLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRVQTR 304
            +EHY CMVDLLGR  +++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R   R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479

[Close]

BLAST of Csor.00g163500 vs. TAIR 10
Match: AT1G06140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-56
Identity = 104/293 (35.49%), Postives = 167/293 (57.00%), Query Frame = 0


Query: 14  LLQACSSTKNHRTLKQIHALTIRLG-ISHHDFIRTKLASTYAACHHLPQATTIFSFATRR 73
           L++AC +    +  K +H ++IR   I   D+++  +   Y  C  L  A  +F  +  R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275

Query: 74  PTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVH 133
              ++  LI   +      ++  +FR ML      ++ TL  ++ SC+ L SLR G+ VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335

Query: 134 GAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFS 193
           G ++ NG   D  N  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F 
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395

Query: 194 EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCM 253
           E    F +M  +   P+ +TF +LL+ACSH G ++ G + F  M   + + P  EHY CM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455

Query: 254 VDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADRVQTRFI 306
           VDLLGR G++ EA+  I  M ++P  + WGALLSACRIH + ++A  +  + +
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL 508

[Close]

BLAST of Csor.00g163500 vs. TAIR 10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-54
Identity = 106/295 (35.93%), Postives = 165/295 (55.93%), Query Frame = 0


Query: 13  ALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIFSFATRR 72
           +LL ACS  K+ R  K++H   IR  +    F+   + S Y  C  L     +F     +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 73  PTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVH 132
               +N +I  +       ++L +FR M+L G  +   ++ PV  +C+ L SLRLGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 133 GAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFS 192
              + +    D     +LI MY K G +  + KVF+G+ E++  SW+A++ GYG+HG+  
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 193 EVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCM 252
           E   LFE M   G  PD+LTF  +LTAC+H GLI  G  Y   M+  F L+P L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 253 VDLLGRVGQVEEAEKLIM-EMEIEPDEALWGALLSACRIHGKAEVADRVQTRFIK 307
           +D+LGR GQ+++A +++  EM  E D  +W +LLS+CRIH   E+ ++V  +  +
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795

[Close]

BLAST of Csor.00g163500 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.2e-54
Identity = 110/283 (38.87%), Postives = 160/283 (56.54%), Query Frame = 0


Query: 14  LLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLPQATTIFSFATRRP 73
           +L ACS        KQ+H+  ++LG   H F  T L   YA    L  A   F     R 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 74  TFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTGLSSLRLGRQVHG 133
             L+ +LI  +       ++L ++R M  +G   +  T+  V+K+C+ L++L LG+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 134 AVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFSE 193
             + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 194 VFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGFDLRPGLEHYTCMV 253
              LFE M+ EG +PD++TF  +++ACSH G +ERG  YF MM     L P ++HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 254 DLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEV 297
           DLL R GQ++EA++ I    I+    LW  LLSAC+ HGK E+
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

[Close]

BLAST of Csor.00g163500 vs. TAIR 10
Match: AT4G19191.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-54
Identity = 108/299 (36.12%), Postives = 168/299 (56.19%), Query Frame = 0


Query: 5   QDIIPFYAALLQACSSTKNHRTLKQ---IHALTIRLGISHHDFIRTKLASTYAACHHLPQ 64
           ++  P  +  +   +S +N  TL Q   IH+  I LG            S Y+       
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309

Query: 65  ATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVIKSCTG 124
           A  +F   T R    +  +I  ++      ++L++F  M+ SG+  D  TL  +I  C  
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369

Query: 125 LSSLRLGRQVHGAVVINGFSTD-LPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 184
             SL  G+ +     I G   D +   NALI MY KCG +  AR +FD  PE+  V+W+ 
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429

Query: 185 LMAGYGVHGMFSEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMEMGF 244
           ++AGY ++G+F E   LF +M++   KP+ +TF A+L AC+H G +E+G EYF +M+  +
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489

Query: 245 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKAEVADR 300
           ++ PGL+HY+CMVDLLGR G++EEA +LI  M  +PD  +WGALL+AC+IH   ++A++
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQ 548

The following BLAST results are available for this feature:

BLAST of Csor.00g163500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	2.1e-57	38.46	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9LND4	2.5e-55	35.49	Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidop...	[more]
Q0WN60	2.4e-53	35.93	Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX...	[more]
P93005	3.1e-53	38.87	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
P0C8Q2	4.0e-53	36.12	Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidop...	[more]

BLAST of Csor.00g163500 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583697.1	6.04e-227	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG7019344.1	1.73e-226	99.68	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_023520705.1	6.77e-224	98.05	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_022927399.1	1.37e-223	98.38	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_022973156.1	1.58e-218	96.13	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]

BLAST of Csor.00g163500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHW3	6.62e-224	98.38	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A6J1I7X0	7.65e-219	96.13	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
A0A0A0K1F7	2.80e-200	89.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041310 PE=4 SV=1	[more]
A0A6J1CNN2	2.99e-195	87.58	pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like OS=Mom...	[more]
A0A5A7UT42	9.97e-194	86.64	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Csor.00g163500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46790.1	1.5e-58	38.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06140.1	1.8e-56	35.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18485.1	1.7e-54	35.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	2.2e-54	38.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G19191.1	2.9e-54	36.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 248..273 e-value: 1.1E-4 score: 22.2 coord: 76..104 e-value: 0.045 score: 14.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 148..174 e-value: 0.001 score: 17.1 coord: 176..210 e-value: 1.4E-7 score: 29.2 coord: 249..273 e-value: 2.0E-4 score: 19.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 174..221 e-value: 4.0E-11 score: 42.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 11.772493
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..117 e-value: 3.9E-7 score: 31.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 234..308 e-value: 2.9E-10 score: 42.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 118..227 e-value: 4.3E-24 score: 86.9
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 11..203 coord: 108..306
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..18 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g163500.m01	Csor.00g163500.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding