Csor.00g163300 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCAGAGAAGAGGACCAGAGCGCCAAAATGGATCCTCCTTGTTCCCCTTCCGGCTGCAATCCTCCAGAGCCCCCCCTCTCCAAGAATGCAAGGAAGAAGCTACTGAAACAACAGCGTTACGAAGCGAAGAAAGCGGAGAAGAAAGCTCAGGAAAAAGAGCAGAAGAAGAAAGATATTGAGCGCAAACGGAAGGAATGGGAGGAGACACTGGCGAGTGTTACGGAGGAGGAGAGAGCCAAGCTGATCGAGTCTAGGAAAAGCCTGAGGAAGGAGAGGATGGGGAAGAGGTCGGAGGAGAAGGAGAAGAAGATTGAGCGGCTCAACAGGGCTAAAGATTGTGGTCAGAAGATTGTCATCGACCTTGAATTTTCTGACCTCATGACCCCCTCGGAGATTCACAGTCTTGTTCAGCAGGTTTGTTCTCTTGTTACTCACTTCATTTGGTTGATTAACTATTATTTGTGGTGGTGCGAATACTGGATTGTTTTCTTATATTTTAGAGGTTTGGTAAATGTTTCTAGTAGATGGAATGTAGAGCATCTTAGAAATGAAATTGATTGTTTCTTAGAAGACCATACATTTGAGATGAAGGGCTTCTTCTCTGAGGTCCCTTAAGAACTGAAATGGAATGTATTCTAGGAATACCATAAATTTTGGAGGTTTTCTAAGCCAAATAGTTTGAGAAGGAAAGCCTTGGCAGACTCAAATCTAGTTTTAGTAGTTGATCAAGTGACGATTGATTGTTTCTTGGAAGACAATCAAATGCCGCCTGAGTCAACACAAACGCATGACTTGAAGTGCCTCTCTACCTTTTCTTTATTTTTCTTTCCCACTTTTGTAGAACAATTGATCATCTTTGGTTTCTTGCAAGTAGCAAAAGATCCTTTCAGTATCCAAAAAAGATGCAGCTACATTGGATTCTCCCTAAATCTCTTCTGTTGCAGTTAAGTGCATCAAACTACCCACCATTTGGTTATAAAGTGTGTCGTTCACCTTCTTTCTTCTTTCCTTCACGGTCTTGATTTAGTTCCAAGCCAGACTCAGTTCGAGTATGCATAGGATTGTACTTTGTTTGAAAAGCATTTAAAATTTCTTGCAACAAACCTTTGAAACTGTAAAGATTTTTTTGTACTATTTGGGAGGAAAAGAAAAAGCCTGTGGCTGTTTGTAATATTTCAATACCAAGGAAATAATACATACTTCAAGATCACATCATTTCTAGTATTAGTAAGATCATCTACGTACTAACAAACAATGAGTTCATTGCCTCCATCTCCAGGTTTTGTGGAAAGGTTATGCTCATAATGATATTTCCTGAAAGCTTTCTTTAAGAAATAAATACCAACAATACTACACGAAAGCTCTTGTAGCATGTTTTAGTCTGTTACTTCTTTGAAACTTATACGCATTAGCTCATCTCCAATCTTTTAACGTGGTGATGATTTCAGTTGGTTAATTTCTTTTATCCTTAAATATGCATTCCACCTAGGGAAGCTCCCGCAAAATTTCCTTAGTGTTGGATAAATTTCCCACACATTTTGACAATGAATGAAAGGTGTCTATGTAACATCTATCATGTGGGATATTGCATATTTTGATTTGAAAAATACTTGGCTTGCCTACACACCAGCTGCTGACGGTAGGATACCCTACTGCCTTTCTATTATGGTGTATTTTTAGTGGCTCAAAAAAGTTTAGTGGAGTCTACTTATCTATTAAATGCAATAGAAAGAGACAATAAAAATGATCTATATTAGAAATTAGTTGGATATTTTAATGACTAGTATGTAGACAGTATTGTTCTTTCAATCCATCTCCCACAAGGAGGAGTAGTTTGAGCTTCTACCATGGGATCCTTATCCTTCATTTCCAACATTAGAATTTATATATATATACAAACAACAATTTCTTCATGTCATTGATAAGACGTAATTACAAAAGAAGGCAAACTATGTGCCGAAGAGGGTATAATTTACACCAAGAGAAAGCAATAGGTATAATTTACACTAGTACAACTTCTTAACCTTGTTTCACCTTTGTTTTCTTCAAGCCTTACAAATGATGAAAATGAGGTTTGAGTCTCTTTTCCCCAAAACTGAATTCTCCAAAAAAAATTAATGAATTTTATGAGTGAATATTACTCATCCTTGATATATTTTTTTAAACAAAGTCTGCTCTCGCTCCAAGACCCAGAATTTGCTCACATAAAGAACTTTCCTTTGTAAGCTCAACTGTAGATTTGAAAACGTGATCTTTGGGTAGGTGTTATACATCCTTGATGTCGACTTATCCCCTGGTCTAGTAATGTCACATTTTTCCAGCTGAAGGAGATTCACGTGTGAGATTTTTGATATGTACCCCTCTATTGGTATTGTGATTTTCCTTCACTTCCTCTAATTGAACCAAATGACCTGGTTTGTAGAACTTGCTGTCTACACTGCTTTCCTTGGGTAACCCTTTATGATATAATGGAAGGGCTCCCAACCTTCCCTCCCCCTCCTACAAGAATCAAGAGTGTATTTTTCCATTGCCATCATTTTTTAAGAATTCATGCTGAAGCATCCTGTCATTCATGCTGAAGCATCCTGTCATTCATGCTGAAGCATCCTGTCAGATATATTCTCCACTCAACAAAATAATCATTACTCGAAATTCTTAGAATAATTTGGAATTAGATTGTACTGAATCTATAGCGGTAGCTTTGGAACAATAACTCAACAACTATATGGATACCTGGTTGATAGAGAGTGACAAGAACCATTGTTTTCTCATTCAAGCCCTGGATAGCTCTCTCCGTACCTACTGGCCACCACGATCTTAAATCAATAAAATGCTTGACTAATCCCACCCTCTCGAAACTCATAACCATAGAGAACCATTGGAAAGGGGGGAAAAGAGAATGAAGAAGATGAAGAAGATGAAGAAGAACAGGGGAATGCATCATAGGAGTCGCTCTTTTCAAAATTTAACTTTCCACATGTTTAATAAAATCATTAGTTTGTAGGTTTAAATTTAGCTTTGAATCATATGATTATACAAGATTCCTATTGGGAGACAATGACTTTATATTGCACCTAAATACTCGGTACTTCTACTAATGTCTGGGATGAGCTCTATTTAATTAGATTAGACTAAGATGCCACATTTTTTGATACTCTTATTGACTCATATATAATTCAAGATTCAGAAATAGAAACTGTCAAAGCATGACACTACTTAGTAGACTTTTCCTACGTTATTTGTCATGCTAAGACATTTGTGAAACACTTCATCATCCCAAAGCTGGTTTATTGTCTTCACATTAAGTTATGGTTAGGATCCTGCCAAATAGTATCTTTTTTTCAATTTACAAATGATTCACACTTCTGACCAATTACTGAGCATGTTTTATCCTATGCAGTCGTCTTTATTTTGATTTTTAATGCACGGTTAATTTTTCAAGAATGATTCTATAATCTCCTGGAAACTGCAAGGTTTTTGAGTATCTTTATTGGGTAAAAACCTGCAGATAATGTATTGTTATGCAGTGAATGGAAGATGTCCTTCTCCTGGTCATCTCTGGTTGACTGGGTGTAATGGAGAAATGGAAACCCAACTGCAAAGGCTTCCAGGATTTGACAAATGGATCATTGAGAGGGAACATAGATCATACATAGATGCTTTGCAGGACCAGAAGGAAAATTTGGTCTATCTCACAGCTGATTCAGAAACTGTGCTTGATGATCTTGATCTAAAGAAAATATATATCATTGGCGGGTTAGTTGATCGGAACAGATGGAAAGGGATTACCATGAAGAAAGCACAAGAACAGGGAATTCAAACAGCAAAACTTCCAATAGGAAGTTACTTGAAGATGTCTAGCTCTCAGGTATACTTCGGTCTTCACATGCATATCATTGTTATCCGCATTTCATAGACTAAATTCTTTCATGCTAGACTTATAAAATGGCAGATTTAGAATACATGTGTGCTCCCTACTTTCTTCTAATTTTTATATTTTTATTATGAGAAATTGAGCTTCTATTGAGAAAAATGAAATAATATAATGGGTATATAAGAAAAAGAATATACTCATGTCAGACATGCGTTCCGAACGTGTTCGACATTGCTTCTCCTCCTATATTAGTGTAGCCTGCTTCATATACTCCAACCAAATAAAACAAGACCTAGCTGATCATTACAAAAAACCCTAACGATGGAAGCCCACAAAGAGACATTGAATCTAGCAGCATTCCAGATCTCTTCCCAAGATCTTTTAACATCTTTGAAACTTTTGCCATTCCTCTTTGACCAAATACCCCATGAAATAGGAAAAAAATAAAACTAGCAAGTCAAAGGACATCATAAAACAACAATCATGGGTACGTGCCAATTATATAGTAAATGACTCCAAAAACAAATCCAAATAGACTAAGCAAATCGACTATTTCAAAGAACATGGTTGTGATTCTCGGACGCTTTACACAAGATGCAAAGATGGTAAAGATGTGGGAACTTGACGCAAAGAGTCTTATCTCTCGTGATCCCAACCAACAATTAATGAGAGTACTACCAAGGGATGTATGGGGAATATTAGTGGGATGGTATTTTAGTGGTCTCTTAGTTATATAAATATGGGTAGTTGGGCATGTTACAGAGGGCAATGATTTTAGGTATTGTCCTGTGTGTGACTTTGGGAGAGACATATTACACCGTGGACACAGTGTAATAGCCCAAGTCCATCGCTAGCAGATATTGTCATTTTTTTTATTTTTCCTTGTAGGCTCCCCGTCAAAGTTTTAAAACGCATTCGCTAGGGAGAGGTTTATCCACCTTTATAAGAAATGCTCCATTCCCCTCTCCAATGGAATGAAAAACAAATGGGAGATGAGGCATCAACCTGTCACAATGATGAAGAAGTCCTAACCAAATCTATAAGCATAGGTTTTTGAGATTACCTACTTACAAAATCACGAACTGACCTCGTATAATTTAGTAATTGTTCTCTTACAATATGTTGGACGTTTTCAATTTCATTTCCAGGTCCTTACTGTGAATCAAGTCCTAGAGATTCTACTCAAGTACATAGAAACGAGAGATTGGAAGGCTTCTTTCTTCCAAGTCGTTCCTCAAAGAAAAAGATGTGAAGCTGAATGTAATAGTGACCATGCAGTTGATGGGGAAGAAAATGGAGATAGAGATGATGAGCAAGAGACTAAGAAGACCAAGTGCGATGAAGTATCTTCCAGTAACCATACTACTTTATAA ATGGAGGCCAGAGAAGAGGACCAGAGCGCCAAAATGGATCCTCCTTGTTCCCCTTCCGGCTGCAATCCTCCAGAGCCCCCCCTCTCCAAGAATGCAAGGAAGAAGCTACTGAAACAACAGCGTTACGAAGCGAAGAAAGCGGAGAAGAAAGCTCAGGAAAAAGAGCAGAAGAAGAAAGATATTGAGCGCAAACGGAAGGAATGGGAGGAGACACTGGCGAGTGTTACGGAGGAGGAGAGAGCCAAGCTGATCGAGTCTAGGAAAAGCCTGAGGAAGGAGAGGATGGGGAAGAGGTCGGAGGAGAAGGAGAAGAAGATTGAGCGGCTCAACAGGGCTAAAGATTGTGGTCAGAAGATTGTCATCGACCTTGAATTTTCTGACCTCATGACCCCCTCGGAGATTCACAGTCTTGTTCAGCAGATAATGTATTGTTATGCAGTGAATGGAAGATGTCCTTCTCCTGGTCATCTCTGGTTGACTGGGTGTAATGGAGAAATGGAAACCCAACTGCAAAGGCTTCCAGGATTTGACAAATGGATCATTGAGAGGGAACATAGATCATACATAGATGCTTTGCAGGACCAGAAGGAAAATTTGGTCTATCTCACAGCTGATTCAGAAACTGTGCTTGATGATCTTGATCTAAAGAAAATATATATCATTGGCGGGTTAGTTGATCGGAACAGATGGAAAGGGATTACCATGAAGAAAGCACAAGAACAGGGAATTCAAACAGCAAAACTTCCAATAGGAAGTTACTTGAAGATGTCTAGCTCTCAGGTCCTTACTGTGAATCAAGTCCTAGAGATTCTACTCAAGTACATAGAAACGAGAGATTGGAAGGCTTCTTTCTTCCAAGTCGTTCCTCAAAGAAAAAGATGTGAAGCTGAATGTAATAGTGACCATGCAGTTGATGGGGAAGAAAATGGAGATAGAGATGATGAGCAAGAGACTAAGAAGACCAAGTGCGATGAAGTATCTTCCAGTAACCATACTACTTTATAA ATGGAGGCCAGAGAAGAGGACCAGAGCGCCAAAATGGATCCTCCTTGTTCCCCTTCCGGCTGCAATCCTCCAGAGCCCCCCCTCTCCAAGAATGCAAGGAAGAAGCTACTGAAACAACAGCGTTACGAAGCGAAGAAAGCGGAGAAGAAAGCTCAGGAAAAAGAGCAGAAGAAGAAAGATATTGAGCGCAAACGGAAGGAATGGGAGGAGACACTGGCGAGTGTTACGGAGGAGGAGAGAGCCAAGCTGATCGAGTCTAGGAAAAGCCTGAGGAAGGAGAGGATGGGGAAGAGGTCGGAGGAGAAGGAGAAGAAGATTGAGCGGCTCAACAGGGCTAAAGATTGTGGTCAGAAGATTGTCATCGACCTTGAATTTTCTGACCTCATGACCCCCTCGGAGATTCACAGTCTTGTTCAGCAGATAATGTATTGTTATGCAGTGAATGGAAGATGTCCTTCTCCTGGTCATCTCTGGTTGACTGGGTGTAATGGAGAAATGGAAACCCAACTGCAAAGGCTTCCAGGATTTGACAAATGGATCATTGAGAGGGAACATAGATCATACATAGATGCTTTGCAGGACCAGAAGGAAAATTTGGTCTATCTCACAGCTGATTCAGAAACTGTGCTTGATGATCTTGATCTAAAGAAAATATATATCATTGGCGGGTTAGTTGATCGGAACAGATGGAAAGGGATTACCATGAAGAAAGCACAAGAACAGGGAATTCAAACAGCAAAACTTCCAATAGGAAGTTACTTGAAGATGTCTAGCTCTCAGGTCCTTACTGTGAATCAAGTCCTAGAGATTCTACTCAAGTACATAGAAACGAGAGATTGGAAGGCTTCTTTCTTCCAAGTCGTTCCTCAAAGAAAAAGATGTGAAGCTGAATGTAATAGTGACCATGCAGTTGATGGGGAAGAAAATGGAGATAGAGATGATGAGCAAGAGACTAAGAAGACCAAGTGCGATGAAGTATCTTCCAGTAACCATACTACTTTATAA MEAREEDQSAKMDPPCSPSGCNPPEPPLSKNARKKLLKQQRYEAKKAEKKAQEKEQKKKDIERKRKEWEETLASVTEEERAKLIESRKSLRKERMGKRSEEKEKKIERLNRAKDCGQKIVIDLEFSDLMTPSEIHSLVQQIMYCYAVNGRCPSPGHLWLTGCNGEMETQLQRLPGFDKWIIEREHRSYIDALQDQKENLVYLTADSETVLDDLDLKKIYIIGGLVDRNRWKGITMKKAQEQGIQTAKLPIGSYLKMSSSQVLTVNQVLEILLKYIETRDWKASFFQVVPQRKRCEAECNSDHAVDGEENGDRDDEQETKKTKCDEVSSSNHTTL Homology
BLAST of Csor.00g163300 vs. ExPASy Swiss-Prot
Match: O14214 (tRNA (guanine(9)-N1)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=trm10 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.7e-36 Identity = 106/301 (35.22%), Postives = 175/301 (58.14%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy Swiss-Prot
Match: Q8C1Z8 (tRNA methyltransferase 10 homolog A OS=Mus musculus OX=10090 GN=Trmt10a PE=2 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 4.1e-35 Identity = 108/310 (34.84%), Postives = 166/310 (53.55%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy Swiss-Prot
Match: Q8TBZ6 (tRNA methyltransferase 10 homolog A OS=Homo sapiens OX=9606 GN=TRMT10A PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.0e-34 Identity = 118/349 (33.81%), Postives = 184/349 (52.72%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy Swiss-Prot
Match: Q66JJ4 (tRNA methyltransferase 10 homolog A OS=Xenopus tropicalis OX=8364 GN=trmt10a PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.0e-34 Identity = 129/357 (36.13%), Postives = 192/357 (53.78%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy Swiss-Prot
Match: Q3MHI8 (tRNA methyltransferase 10 homolog A OS=Bos taurus OX=9913 GN=TRMT10A PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.5e-34 Identity = 112/324 (34.57%), Postives = 173/324 (53.40%), Query Frame = 0
BLAST of Csor.00g163300 vs. NCBI nr
Match: KAG6583717.1 (hypothetical protein SDJN03_19649, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 640 bits (1651), Expect = 4.26e-231 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
BLAST of Csor.00g163300 vs. NCBI nr
Match: XP_023520714.1 (tRNA (guanine(9)-N1)-methyltransferase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 633 bits (1633), Expect = 2.36e-228 Identity = 331/334 (99.10%), Postives = 332/334 (99.40%), Query Frame = 0
BLAST of Csor.00g163300 vs. NCBI nr
Match: XP_022927615.1 (tRNA (guanine(9)-N1)-methyltransferase [Cucurbita moschata]) HSP 1 Score: 632 bits (1631), Expect = 4.77e-228 Identity = 329/334 (98.50%), Postives = 332/334 (99.40%), Query Frame = 0
BLAST of Csor.00g163300 vs. NCBI nr
Match: XP_022973151.1 (tRNA (guanine(9)-N1)-methyltransferase [Cucurbita maxima]) HSP 1 Score: 627 bits (1616), Expect = 9.21e-226 Identity = 326/334 (97.60%), Postives = 331/334 (99.10%), Query Frame = 0
BLAST of Csor.00g163300 vs. NCBI nr
Match: XP_038893739.1 (tRNA (guanine(9)-N1)-methyltransferase [Benincasa hispida]) HSP 1 Score: 566 bits (1459), Expect = 8.59e-202 Identity = 302/336 (89.88%), Postives = 313/336 (93.15%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy TrEMBL
Match: A0A6J1EPG7 (tRNA (guanine(9)-N(1))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111434383 PE=4 SV=1) HSP 1 Score: 632 bits (1631), Expect = 2.31e-228 Identity = 329/334 (98.50%), Postives = 332/334 (99.40%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy TrEMBL
Match: A0A6J1I7W5 (tRNA (guanine(9)-N(1))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111471663 PE=4 SV=1) HSP 1 Score: 627 bits (1616), Expect = 4.46e-226 Identity = 326/334 (97.60%), Postives = 331/334 (99.10%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy TrEMBL
Match: A0A0A0LYJ3 (SAM-dependent MTase TRM10-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173210 PE=4 SV=1) HSP 1 Score: 547 bits (1410), Expect = 1.04e-194 Identity = 288/331 (87.01%), Postives = 307/331 (92.75%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy TrEMBL
Match: A0A5D3CW30 (tRNA (Guanine(9)-N1)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00280 PE=4 SV=1) HSP 1 Score: 546 bits (1407), Expect = 2.68e-194 Identity = 286/327 (87.46%), Postives = 303/327 (92.66%), Query Frame = 0
BLAST of Csor.00g163300 vs. ExPASy TrEMBL
Match: A0A1S3CL37 (tRNA (Guanine(9)-N1)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502202 PE=4 SV=1) HSP 1 Score: 546 bits (1407), Expect = 2.68e-194 Identity = 286/327 (87.46%), Postives = 303/327 (92.66%), Query Frame = 0
BLAST of Csor.00g163300 vs. TAIR 10
Match: AT5G47680.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-111 Identity = 229/336 (68.15%), Postives = 263/336 (78.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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