Csor.00g163220 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g163220
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 6703791 .. 6704033 (+)
RNA-Seq ExpressionCsor.00g163220
SyntenyCsor.00g163220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGAGCTTATCATAAACTTTGCCCGGGTGGATCGCGGGTCGCCGGGGTTTGTTTCGTCGCACGGGTACTGGATCAGCCGAGGAACATGGATCAGGTTGCCTGGCTGTGAACGCGTGTCGCTGGAAGGTTGGAGCTACGTCTCCCTAGGCAGCGTTCGACGCGTGTCCGATGATTGTTGGTGCATGTGGGCCTCTTGCCGGTTGACACGTGGTGCTCCGTCGTCTTCTCTCTCCTCTTAG

mRNA sequence

ATGTGTGAGCTTATCATAAACTTTGCCCGGGTGGATCGCGGGTCGCCGGGGTTTGTTTCGTCGCACGGGTACTGGATCAGCCGAGGAACATGGATCAGGTTGCCTGGCTGTGAACGCGTGTCGCTGGAAGGTTGGAGCTACGTCTCCCTAGGCAGCGTTCGACGCGTGTCCGATGATTGTTGGTGCATGTGGGCCTCTTGCCGGTTGACACGTGGTGCTCCGTCGTCTTCTCTCTCCTCTTAG

Coding sequence (CDS)

ATGTGTGAGCTTATCATAAACTTTGCCCGGGTGGATCGCGGGTCGCCGGGGTTTGTTTCGTCGCACGGGTACTGGATCAGCCGAGGAACATGGATCAGGTTGCCTGGCTGTGAACGCGTGTCGCTGGAAGGTTGGAGCTACGTCTCCCTAGGCAGCGTTCGACGCGTGTCCGATGATTGTTGGTGCATGTGGGCCTCTTGCCGGTTGACACGTGGTGCTCCGTCGTCTTCTCTCTCCTCTTAG

Protein sequence

MCELIINFARVDRGSPGFVSSHGYWISRGTWIRLPGCERVSLEGWSYVSLGSVRRVSDDCWCMWASCRLTRGAPSSSLSS
Homology
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BLAST of Csor.00g163220 vs. NCBI nr
Match: KAG6583725.1 (hypothetical protein SDJN03_19657, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 173 bits (439), Expect = 1.14e-54
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MCELIINFARVDRGSPGFVSSHGYWISRGTWIRLPGCERVSLEGWSYVSLGSVRRVSDDC 60
          MCELIINFARVDRGSPGFVSSHGYWISRGTWIRLPGCERVSLEGWSYVSLGSVRRVSDDC
Sbjct: 1  MCELIINFARVDRGSPGFVSSHGYWISRGTWIRLPGCERVSLEGWSYVSLGSVRRVSDDC 60

Query: 61 WCMWASCRLTRGAPSSSLSS 80
          WCMWASCRLTRGAPSSSLSS
Sbjct: 61 WCMWASCRLTRGAPSSSLSS 80

The following BLAST results are available for this feature:
BLAST of Csor.00g163220 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g163220 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583725.11.14e-54100.00hypothetical protein SDJN03_19657, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g163220 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g163220 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g163220.m01Csor.00g163220.m01mRNA