Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCACTATCCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACATCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCAAAATTTTGTTCGAGAACGATGCGATTCTCTGCCGCCGTTGAAGACGACTCCGGTGAGAACTTACCGGAGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATCAGAAAGTGGCAAGTATGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAATGTCTCATGAAAAGGGCCACCAAGCTTTAATTTAG
mRNA sequence
ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCACTATCCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACATCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCAAAATTTTGTTCGAGAACGATGCGATTCTCTGCCGCCGTTGAAGACGACTCCGGTGAGAACTTACCGGAGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATCAGAAAGTGGCAAGTATGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAATGTCTCATGAAAAGGGCCACCAAGCTTTAATTTAG
Coding sequence (CDS)
ATGTTCTGGTTCTTCATTTCCAATGCCCTCATCTTCATCATTGCTGCTGATTATGCCTATTTCTCACTATCCCAATACAAAAGATCCCATCTTTATGAACATTACTCACCTCCCAACCCAAAGATGACTCATTTTCAACATCAAACTTCTTCATTTGTAGTATTTGATGAAAAGAGAGAATACCCAGATGGGAATTTGCAAAATTTTGTTCGAGAACGATGCGATTCTCTGCCGCCGTTGAAGACGACTCCGGTGAGAACTTACCGGAGGAGCAAGTCGGAGAAACCCAAAAGAAGTGTGTCAAAGGAGAGCAAGAAAAAGATGGCGAAGAGATCAGAAAGTGGCAAGTATGAAGAGAAGGAATTAGAAGAAAATGAGTATTCAAAGATGACAGATGAAGAACTGAACAGAAGGGTGGAAGAGTTTATTCAAAGATTTAACACACAAATGAGACTTGAAACTAAATCAGCTGAATTAATGTCTCATGAAAAGGGCCACCAAGCTTTAATTTAG
Protein sequence
MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKREYPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI
Homology
BLAST of Csor.00g161490 vs. NCBI nr
Match:
KAG6583897.1 (hypothetical protein SDJN03_19829, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 321 bits (823), Expect = 2.40e-110
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE
Sbjct: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
Query: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK
Sbjct: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
Query: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI 170
ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI
Sbjct: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI 170
BLAST of Csor.00g161490 vs. NCBI nr
Match:
XP_022927149.1 (uncharacterized protein LOC111434084 [Cucurbita moschata])
HSP 1 Score: 316 bits (809), Expect = 2.92e-107
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE
Sbjct: 64 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 123
Query: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
YPDGNLQNFV ERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK
Sbjct: 124 YPDGNLQNFVPERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 183
Query: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI 170
ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGH ALI
Sbjct: 184 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHLALI 233
BLAST of Csor.00g161490 vs. NCBI nr
Match:
XP_023001467.1 (uncharacterized protein LOC111495593 [Cucurbita maxima])
HSP 1 Score: 299 bits (766), Expect = 1.03e-100
Identity = 157/170 (92.35%), Postives = 165/170 (97.06%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
+FWFFISN LIFIIAADYAYFSLSQYKRSH YEHYSPPNPK+THFQHQTSSFVVF+EKRE
Sbjct: 64 IFWFFISNTLIFIIAADYAYFSLSQYKRSHFYEHYSPPNPKITHFQHQTSSFVVFEEKRE 123
Query: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
YPDGNLQN V++RCDSLPPLKTTPVRTY+RSKSEKPKR+VSKESKKKMAKRSESGKYE K
Sbjct: 124 YPDGNLQNIVQDRCDSLPPLKTTPVRTYQRSKSEKPKRTVSKESKKKMAKRSESGKYEGK 183
Query: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI 170
ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAEL SH+KGHQALI
Sbjct: 184 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKSHKKGHQALI 233
BLAST of Csor.00g161490 vs. NCBI nr
Match:
XP_023520225.1 (uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 293 bits (749), Expect = 1.12e-98
Identity = 155/166 (93.37%), Postives = 160/166 (96.39%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
MFWFFISNALIFIIAADYAYFSL+QYKRSHLYEHYSPPNPKMTHFQ QTSSFVVFDEKRE
Sbjct: 31 MFWFFISNALIFIIAADYAYFSLTQYKRSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKRE 90
Query: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
YPDGNL+NFV+ERCDS+P LKTTPVRTY RSKSEKPKRSVSKESKKKMAKR ESG YEEK
Sbjct: 91 YPDGNLRNFVQERCDSMPLLKTTPVRTYERSKSEKPKRSVSKESKKKMAKRLESGMYEEK 150
Query: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGH 166
ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAEL SH+KGH
Sbjct: 151 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKSHKKGH 196
BLAST of Csor.00g161490 vs. NCBI nr
Match:
KAE8653186.1 (hypothetical protein Csa_020019 [Cucumis sativus])
HSP 1 Score: 180 bits (456), Expect = 1.39e-53
Identity = 114/161 (70.81%), Postives = 125/161 (77.64%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYE--HYSPPNPKMTHFQHQTSSFVVFDEK 60
+FWFFISN LIFIIA DY FSLSQ+K HLYE +YSPPNPK+THFQ QTSS VVFDEK
Sbjct: 74 VFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEK 133
Query: 61 REYPDGNLQNFVR-ERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMA--KRSESG 120
RE PD L+ V+ +R DS TTPVRTY R KSEKPKR VS E KKM +RSES
Sbjct: 134 RETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKMMGKRRSESV 193
Query: 121 KYEEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 155
K E KELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 194 KNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 234
BLAST of Csor.00g161490 vs. ExPASy TrEMBL
Match:
A0A6J1EH73 (uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC111434084 PE=4 SV=1)
HSP 1 Score: 316 bits (809), Expect = 1.41e-107
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE
Sbjct: 64 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 123
Query: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
YPDGNLQNFV ERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK
Sbjct: 124 YPDGNLQNFVPERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 183
Query: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI 170
ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGH ALI
Sbjct: 184 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHLALI 233
BLAST of Csor.00g161490 vs. ExPASy TrEMBL
Match:
A0A6J1KGM0 (uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593 PE=4 SV=1)
HSP 1 Score: 299 bits (766), Expect = 4.99e-101
Identity = 157/170 (92.35%), Postives = 165/170 (97.06%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKRE 60
+FWFFISN LIFIIAADYAYFSLSQYKRSH YEHYSPPNPK+THFQHQTSSFVVF+EKRE
Sbjct: 64 IFWFFISNTLIFIIAADYAYFSLSQYKRSHFYEHYSPPNPKITHFQHQTSSFVVFEEKRE 123
Query: 61 YPDGNLQNFVRERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEEK 120
YPDGNLQN V++RCDSLPPLKTTPVRTY+RSKSEKPKR+VSKESKKKMAKRSESGKYE K
Sbjct: 124 YPDGNLQNIVQDRCDSLPPLKTTPVRTYQRSKSEKPKRTVSKESKKKMAKRSESGKYEGK 183
Query: 121 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHEKGHQALI 170
ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAEL SH+KGHQALI
Sbjct: 184 ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKSHKKGHQALI 233
BLAST of Csor.00g161490 vs. ExPASy TrEMBL
Match:
A0A0A0M033 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1)
HSP 1 Score: 180 bits (456), Expect = 2.54e-54
Identity = 114/161 (70.81%), Postives = 125/161 (77.64%), Query Frame = 0
Query: 1 MFWFFISNALIFIIAADYAYFSLSQYKRSHLYE--HYSPPNPKMTHFQHQTSSFVVFDEK 60
+FWFFISN LIFIIA DY FSLSQ+K HLYE +YSPPNPK+THFQ QTSS VVFDEK
Sbjct: 42 VFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEK 101
Query: 61 REYPDGNLQNFVR-ERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMA--KRSESG 120
RE PD L+ V+ +R DS TTPVRTY R KSEKPKR VS E KKM +RSES
Sbjct: 102 RETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEISKKMMGKRRSESV 161
Query: 121 KYEEKELE-ENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 155
K E KELE ENE++KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 162 KNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 202
BLAST of Csor.00g161490 vs. ExPASy TrEMBL
Match:
A0A7N2LQF9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 2.61e-18
Identity = 75/181 (41.44%), Postives = 99/181 (54.70%), Query Frame = 0
Query: 2 FWFFISNALIFIIAADYAYFSLSQYKRSHLYEHY----------------------SPPN 61
FWFF+SN LI IIA DY +S S K+ LY+ Y S P
Sbjct: 61 FWFFLSNTLILIIAVDYGAYSSSNEKQD-LYQEYVKRTQVKNVPSFVPQYQKIVKQSTPK 120
Query: 62 PKMTHFQHQTSSFVVFDEKREYPDGNLQNFVRERCDSLPPLKTT----PVRTYRRSKSEK 121
K+ FQ + V+ E + +P+ NLQ ++ DS P + +TYRRSKSE+
Sbjct: 121 QKVDSFQEKRE--VIVQEVQVFPERNLQVVIKS--DSEKPSEDLREKIKAKTYRRSKSEQ 180
Query: 122 PKRSVSKESKKKMAKRSESGKYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 156
KR V ESK + + SE+ K EE NE+S M+DEELNRRVEEFIQRFN ++RL++
Sbjct: 181 AKRVVIDESKNIITRSSETEKNEE-----NEFSTMSDEELNRRVEEFIQRFNREIRLQST 231
BLAST of Csor.00g161490 vs. ExPASy TrEMBL
Match:
A0A2N9GT34 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1)
HSP 1 Score: 84.7 bits (208), Expect = 5.07e-17
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 0
Query: 2 FWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEKREY 61
FWFF+SN LI IIA DY +S S+ K+ E+ K SFV ++
Sbjct: 62 FWFFLSNTLILIIAVDYGAYSSSKEKQDFYQEYVMDTQVK------NVPSFVS-----QH 121
Query: 62 PDGNLQNFVRERCDSL--PPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKYEE 121
P+ ++E + L P + + YRRSKSEK KR + ESK + + SE+ K+E
Sbjct: 122 PET-----IKEVVEVLQEPEKEKIQAKPYRRSKSEKTKRVLIDESKNIVLRMSETAKHER 181
Query: 122 K-ELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELMSHE 163
LEENE+S M+DEELNRRVEEFIQRFN Q+RL+ ++ +S+E
Sbjct: 182 TPSLEENEFSSMSDEELNRRVEEFIQRFNRQIRLQARNFTQVSNE 210
BLAST of Csor.00g161490 vs. TAIR 10
Match:
AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )
HSP 1 Score: 48.1 bits (113), Expect = 8.0e-06
Identity = 65/217 (29.95%), Postives = 97/217 (44.70%), Query Frame = 0
Query: 4 FFISNALIFIIAADYAYFS------------LSQYKRSHLYEHYSP-------------- 63
FFISN LI IIAADY FS ++ + ++YSP
Sbjct: 58 FFISNTLILIIAADYGSFSDKESQDFYGEYTVAAATMRNRADNYSPIPVLTYRENTKDGE 117
Query: 64 -PNPKMTHFQHQTSS-----------------FVVFDEKREYPDGNLQNF---------V 123
NPK F++ V EK++ D ++ +
Sbjct: 118 IKNPKDVEFRNPEEEDEPMVKDIICVSPPEKIVRVVSEKKQRDDVAMEEYKPVTEQTLAS 177
Query: 124 RERCDSLPPLKTTPVRTYRRSKSEKPKR---SVSKESKKKMA---KRSESG-------KY 155
E C++ P + Y RSKS+KP+R SV E+ K+ + K+S+ K+
Sbjct: 178 EEACNTRN--HVNPNKPYGRSKSDKPRRKRLSVDTETTKRKSYGRKKSDCSRWMVIPEKW 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6583897.1 | 2.40e-110 | 100.00 | hypothetical protein SDJN03_19829, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022927149.1 | 2.92e-107 | 98.82 | uncharacterized protein LOC111434084 [Cucurbita moschata] | [more] |
XP_023001467.1 | 1.03e-100 | 92.35 | uncharacterized protein LOC111495593 [Cucurbita maxima] | [more] |
XP_023520225.1 | 1.12e-98 | 93.37 | uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo] | [more] |
KAE8653186.1 | 1.39e-53 | 70.81 | hypothetical protein Csa_020019 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EH73 | 1.41e-107 | 98.82 | uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC1114340... | [more] |
A0A6J1KGM0 | 4.99e-101 | 92.35 | uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593... | [more] |
A0A0A0M033 | 2.54e-54 | 70.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1 | [more] |
A0A7N2LQF9 | 2.61e-18 | 41.44 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A2N9GT34 | 5.07e-17 | 42.42 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G30190.1 | 8.0e-06 | 29.95 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |