Csor.00g161400 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g161400
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Csor_Chr13: 8138403 .. 8139814 (-)
RNA-Seq Expression	Csor.00g161400
Synteny	Csor.00g161400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCTCTGCAATGGCTCTCTCCTCTCCGTCGCTTGCCGGGAAGGCAGTGAAACTCACTCCCTCCTCCTCGGAGATTGTCGGCAATGGCAGAGTCAGCATGAGGAAATCCGCCGCCAAATCTGTTTCTTCTGGAAGCCTATGGTACGGACCTGACCGTGTCAAGTATTTGGGTCCATTCTCCGGCGAGTCTCCGTCCTACCTCACCGGGGAGTTCCCCGGTGACTATGGCTGGGACACTGCCGGACTTTCTGCTGACCCTGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTTATCCACTCCAGGTAAGAACTCAATAGCCCAACTTTACTTTAGGCCCATCATAAACAAAATTTTCAAAAGAAAAAAAGATTTTTTTTAGAAGGGTTGGGAGGGAGTTTGTTCATCATGAGTTTATAAGTACCAAATAACAGGGTCTTTTGAAAAACCTAAAACAAAGTTACTAGAGTTTATGTTAAAAGTGAATAATATTTAAGATCTTGAAGATATTGATTTCTAACATGTTATCAATATCATGTCCTTAATTTAATTACGTCAATGGAATCTTCAAATGTCGAACAAAGAACGAAAGTATAGTCAAAAGTGATTTTTTGTTCGAGAACTCCAAAAAATATAGTCGAGCCTCGATTGTTCAAGGGATCCATAAGCCTTAGTAGAGGCTTTATAGTGTAATTTGTTCGGAGGTGTCATGCCCTTTTAACTTAGTCATGACAATAAAATCTTAAATCTGGAACAAAGAATGAAGTACAGTCCAAAGTGACTCAAATATCAAACAAAGAGTATTCTGGGAGGATTGTTGGGAAGGAGTCTCGGGTTATAAGTAAGGAATACAACTACATTGTTACGAGATCCATGATTCCTAACACTTTTTTCTTTTCTTGGGTCGGCCATTTTACAGGTGGGCTATGCTCGGAGCATTGGGGTGCGTGTTCCCGGAGCTTCTATCCCGCAACGGCGTGAAGTTTGGGGAAGCGGTGTGGTTCAAGGCAGGTTCACAGATCTTCAGCGAAGGTGGGCTCGACTACTTGGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCATCGCAGGTGGTTCTGATGGGGGCGGTGGAGGGATACCGTATTGCGGGTGGGCCATTGGGGGAGGTGACGGATCCGATATACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGCTTCTTCGTTCAGGCCATCGTGACTGGAAAGGGCCCATTGGAGAATCTTGCCGATCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCAACTTTGTCCCTGGAAAATAA

mRNA sequence

ATGGCGGCCTCTGCAATGGCTCTCTCCTCTCCGTCGCTTGCCGGGAAGGCAGTGAAACTCACTCCCTCCTCCTCGGAGATTGTCGGCAATGGCAGAGTCAGCATGAGGAAATCCGCCGCCAAATCTGTTTCTTCTGGAAGCCTATGGTACGGACCTGACCGTGTCAAGTATTTGGGTCCATTCTCCGGCGAGTCTCCGTCCTACCTCACCGGGGAGTTCCCCGGTGACTATGGCTGGGACACTGCCGGACTTTCTGCTGACCCTGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTTATCCACTCCAGGTGGGCTATGCTCGGAGCATTGGGGTGCGTGTTCCCGGAGCTTCTATCCCGCAACGGCGTGAAGTTTGGGGAAGCGGTGTGGTTCAAGGCAGGTTCACAGATCTTCAGCGAAGGTGGGCTCGACTACTTGGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCATCGCAGGTGGTTCTGATGGGGGCGGTGGAGGGATACCGTATTGCGGGTGGGCCATTGGGGGAGGTGACGGATCCGATATACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGCTTCTTCGTTCAGGCCATCGTGACTGGAAAGGGCCCATTGGAGAATCTTGCCGATCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCAACTTTGTCCCTGGAAAATAA

Coding sequence (CDS)

ATGGCGGCCTCTGCAATGGCTCTCTCCTCTCCGTCGCTTGCCGGGAAGGCAGTGAAACTCACTCCCTCCTCCTCGGAGATTGTCGGCAATGGCAGAGTCAGCATGAGGAAATCCGCCGCCAAATCTGTTTCTTCTGGAAGCCTATGGTACGGACCTGACCGTGTCAAGTATTTGGGTCCATTCTCCGGCGAGTCTCCGTCCTACCTCACCGGGGAGTTCCCCGGTGACTATGGCTGGGACACTGCCGGACTTTCTGCTGACCCTGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTTATCCACTCCAGGTGGGCTATGCTCGGAGCATTGGGGTGCGTGTTCCCGGAGCTTCTATCCCGCAACGGCGTGAAGTTTGGGGAAGCGGTGTGGTTCAAGGCAGGTTCACAGATCTTCAGCGAAGGTGGGCTCGACTACTTGGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCATCGCAGGTGGTTCTGATGGGGGCGGTGGAGGGATACCGTATTGCGGGTGGGCCATTGGGGGAGGTGACGGATCCGATATACCCGGGTGGGAGCTTTGACCCGTTGGGACTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAGGTGAAGGAGCTTAAGAATGGAAGACTGGCCATGTTCTCCATGTTTGGCTTCTTCGTTCAGGCCATCGTGACTGGAAAGGGCCCATTGGAGAATCTTGCCGATCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCTTACGCCACCAACTTTGTCCCTGGAAAATAA

Protein sequence

MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of Csor.00g161400 vs. ExPASy Swiss-Prot
Match: P27495 (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.8e-142
Identity = 247/267 (92.51%), Postives = 258/267 (96.63%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSA--AKSVSSGSLWYGPDRVKYL 60
           MAAS MALSSPS AGKAVKL+PSSSEI GNG+V+MRK+A  AK+VSSGS WYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Csor.00g161400 vs. ExPASy Swiss-Prot
Match: P27493 (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 4.4e-141
Identity = 241/265 (90.94%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAA+ MALSSPS AG+AVKL+PS+ EI GNGRVSMRK+ AK V+S S WYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 9.8e-141
Identity = 247/264 (93.56%), Postives = 253/264 (95.83%), Query Frame = 0


Query: 2   AASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGPF 61
           AAS+MALSSPSLAGKAVKL PS+ E+   GRVSMRK+  K VSSGS WYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLADPVNNNAWAYATNFVPGK 266
           LADHLA PVNNNAWAYATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Csor.00g161400 vs. ExPASy Swiss-Prot
Match: P07370 (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 1.3e-140
Identity = 241/265 (90.94%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAA+ MALSSPS AG+AVKL+PS+SEI GNGR++MRK+ AKS  S S WYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 1.7e-140
Identity = 245/267 (91.76%), Postives = 254/267 (95.13%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSA--AKSVSSGSLWYGPDRVKYL 60
           MA S MALSS + AGKAVKL+PSSSEI GNGRV+MRK+A  AK  SSGS WYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Csor.00g161400 vs. NCBI nr
Match: XP_022927253.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >KAG6583906.1 Chlorophyll a-b binding protein 40, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 532 bits (1371), Expect = 9.73e-191
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. NCBI nr
Match: XP_023001458.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 529 bits (1362), Expect = 2.29e-189
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAASAMALSSPSLAGKAVKLTPSSSE+VGNGRVSMRKSAAKSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSELVGNGRVSMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. NCBI nr
Match: XP_008444193.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0053968.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20653.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 518 bits (1334), Expect = 4.26e-185
Identity = 257/265 (96.98%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAAS MALSSPSLAGKAVKLTPSS E+ GN RV+MRKSAAKSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. NCBI nr
Match: XP_022142169.1 (chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia])

HSP 1 Score: 516 bits (1329), Expect = 2.46e-184
Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAAS MALSSPSLAGKAVKLTPSS E++GNGRVSMRK  +KSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. NCBI nr
Match: XP_038877609.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 516 bits (1329), Expect = 2.56e-184
Identity = 257/266 (96.62%), Postives = 261/266 (98.12%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNG-RVSMRKSAAKSVSSGSLWYGPDRVKYLG 60
           MAAS MALSSPSLAGKAVKLTPSS E++GNG RVSMRKSA+KS+SSGS WYGPDRVKYLG
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGGRVSMRKSASKSISSGSPWYGPDRVKYLG 60

Query: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180
           RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWAYATNFVPGK 265
           ENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAYATNFVPGK 266

[Close]

BLAST of Csor.00g161400 vs. ExPASy TrEMBL
Match: A0A6J1EKH2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434154 PE=3 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 4.71e-191
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. ExPASy TrEMBL
Match: A0A6J1KQK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495586 PE=3 SV=1)

HSP 1 Score: 529 bits (1362), Expect = 1.11e-189
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAASAMALSSPSLAGKAVKLTPSSSE+VGNGRVSMRKSAAKSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPSLAGKAVKLTPSSSELVGNGRVSMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. ExPASy TrEMBL
Match: A0A5D3DAQ5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00370 PE=3 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 2.06e-185
Identity = 257/265 (96.98%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAAS MALSSPSLAGKAVKLTPSS E+ GN RV+MRKSAAKSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. ExPASy TrEMBL
Match: A0A1S3BAK6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487605 PE=3 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 2.06e-185
Identity = 257/265 (96.98%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAAS MALSSPSLAGKAVKLTPSS E+ GN RV+MRKSAAKSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELFGNSRVNMRKSAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. ExPASy TrEMBL
Match: A0A6J1CKT5 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012353 PE=3 SV=1)

HSP 1 Score: 516 bits (1329), Expect = 1.19e-184
Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAAS MALSSPSLAGKAVKLTPSS E++GNGRVSMRK  +KSVSSGS WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKFVSKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g161400 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 480.3 bits (1235), Expect = 9.8e-136
Identity = 234/267 (87.64%), Postives = 253/267 (94.76%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVS-SGSLWYGPDRVKYLG 60
           MAAS MALSSP+ AGKAVKL+P++SE++G+GRV+MRK+ AK    SGS WYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGESPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Csor.00g161400 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-135
Identity = 233/267 (87.27%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVS-SGSLWYGPDRVKYLG 60
           MAAS MALSSP+ AGKAV L+P++SE++G+GRV+MRK+ AK    SGS WYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGESPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Csor.00g161400 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-135
Identity = 233/267 (87.27%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVS-SGSLWYGPDRVKYLG 60
           MAAS MALSSP+ AGKAV L+P++SE++G+GRV+MRK+ AK    SGS WYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGESPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Csor.00g161400 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-135
Identity = 231/266 (86.84%), Postives = 250/266 (93.98%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVSSGSLWYGPDRVKYLGP 60
           MAAS MALSSP+L GKAVKL+P++SE+ G GR++MRK++  +  SGS WYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWAYATNFVPGK 266
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Csor.00g161400 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-132
Identity = 231/267 (86.52%), Postives = 250/267 (93.63%), Query Frame = 0


Query: 1   MAASAMALSSPSLAGKAVKLTPSSSEIVGNGRVSMRKSAAKSVS-SGSLWYGPDRVKYLG 60
           MA+S MALSSP+ AGKAVK  P++S+++G+GRV+MRK+ AK    SGS WYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Csor.00g161400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27495	1.8e-142	92.51	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27493	4.4e-141	90.94	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P09756	9.8e-141	93.56	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P07370	1.3e-140	90.94	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P07369	1.7e-140	91.76	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of Csor.00g161400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927253.1	9.73e-191	100.00	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata] >KAG65...	[more]
XP_023001458.1	2.29e-189	99.25	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]
XP_008444193.1	4.26e-185	96.98	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_022142169.1	2.46e-184	96.23	chlorophyll a-b binding protein of LHCII type 1-like [Momordica charantia]	[more]
XP_038877609.1	2.56e-184	96.62	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]

BLAST of Csor.00g161400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKH2	4.71e-191	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KQK6	1.11e-189	99.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3DAQ5	2.06e-185	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BAK6	2.06e-185	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CKT5	1.19e-184	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Csor.00g161400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29930.1	9.8e-136	87.64	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	3.7e-135	87.27	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	3.7e-135	87.27	chlorophyll A/B-binding protein 2	[more]
AT2G34430.1	3.7e-135	86.84	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	1.3e-132	86.52	photosystem II light harvesting complex gene B1B2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 5.9E-91 score: 305.8
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 66..231 e-value: 2.6E-49 score: 167.8
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265
None	No IPR available	PANTHER	PTHR21649:SF88	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g161400.m01	Csor.00g161400.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding