Csor.00g160750 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g160750
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTCP family transcription factor
LocationCsor_Chr13: 8493074 .. 8493642 (+)
RNA-Seq ExpressionCsor.00g160750
SyntenyCsor.00g160750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAACGTCGCTTGCGTTCGAGCGCCGGCAGTGGCAAGGTTTACACTTCAAAAGGCTTCCGAGCCAGGAAGCTCCGGCTGTCCGCTCCGACCGCCATTCAATTCTACGACATTCAGGATCGCCTTGGCTATAACCGACCAACTGAAGCCATCGACTGGCTTCTTCAGAATGCCAAATCCGCCATTGATGTCCTCTCTCGACCATTAGAAACAGAGGACGGCAAGCGTAGCTTCCCTTCTATCCTTCTTCCGTTCCGTCGTCGTCTTCTTCTTCCCAATTCGTGGCTTACCCACTTGAAAATTTCTTCCAAAATGTTCGATTATTGTTTTTGTTTTCTGGAAAATTTTGTTTTCAGTTAAAGTTGCCAGAAATGAAGTTGTGTGATTCTGTAACAGGGCAACCTCTCTGTTTTGAGTCCAATGATAATGAATGTCACGCCGGCGGAATTCTCCGGCATGCAGCCACCGTGTTCAAGTCAGAGCTATGCAACAACTGGGTTACCATCCTTTCCAACGTGGGAATAGCAACCGCCAAACGCCAGCCGCCGGATGATTTTCAAACGTGA

mRNA sequence

ATGGAAGAACGTCGCTTGCGTTCGAGCGCCGGCAGTGGCAAGGTTTACACTTCAAAAGGCTTCCGAGCCAGGAAGCTCCGGCTGTCCGCTCCGACCGCCATTCAATTCTACGACATTCAGGATCGCCTTGGCTATAACCGACCAACTGAAGCCATCGACTGGCTTCTTCAGAATGCCAAATCCGCCATTGATGTCCTCTCTCGACCATTAGAAACAGAGGACGGCAAGCGGCAACCTCTCTGTTTTGAGTCCAATGATAATGAATGTCACGCCGGCGGAATTCTCCGGCATGCAGCCACCGTGTTCAAGTCAGAGCTATGCAACAACTGGGTTACCATCCTTTCCAACGTGGGAATAGCAACCGCCAAACGCCAGCCGCCGGATGATTTTCAAACGTGA

Coding sequence (CDS)

ATGGAAGAACGTCGCTTGCGTTCGAGCGCCGGCAGTGGCAAGGTTTACACTTCAAAAGGCTTCCGAGCCAGGAAGCTCCGGCTGTCCGCTCCGACCGCCATTCAATTCTACGACATTCAGGATCGCCTTGGCTATAACCGACCAACTGAAGCCATCGACTGGCTTCTTCAGAATGCCAAATCCGCCATTGATGTCCTCTCTCGACCATTAGAAACAGAGGACGGCAAGCGGCAACCTCTCTGTTTTGAGTCCAATGATAATGAATGTCACGCCGGCGGAATTCTCCGGCATGCAGCCACCGTGTTCAAGTCAGAGCTATGCAACAACTGGGTTACCATCCTTTCCAACGTGGGAATAGCAACCGCCAAACGCCAGCCGCCGGATGATTTTCAAACGTGA

Protein sequence

MEERRLRSSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLSRPLETEDGKRQPLCFESNDNECHAGGILRHAATVFKSELCNNWVTILSNVGIATAKRQPPDDFQT
Homology
[Close]
BLAST of Csor.00g160750 vs. ExPASy Swiss-Prot
Match: Q9MAH8 (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLSR--PLE 73
           KV T+KG R R++RLSAPTAIQFYD+QDRLG++RP++A+DWL+  AKSAID L++  P  
Sbjct: 55  KVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWN 114

Query: 74  TEDGKRQPLCFESN 86
             D  RQ     +N
Sbjct: 115 PADTLRQHAAAAAN 128

[Close]
BLAST of Csor.00g160750 vs. ExPASy Swiss-Prot
Match: O82277 (Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 14 KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLSRPLETE 73
          KV+TSKG R R++RLSA TAIQFYD+QDRLGY+RP++A+DWL++ AK+AID L     T 
Sbjct: 35 KVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLELGETTT 94

Query: 74 DGKRQ 79
             RQ
Sbjct: 95 TTTRQ 99

[Close]
BLAST of Csor.00g160750 vs. ExPASy Swiss-Prot
Match: A2WV68 (Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 39/67 (58.21%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 4   RRLRSSAG----SGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNA 63
           R +RS+AG      KV T++G R R++RL+A TAI+FYD+QDRLGY+RP++A+DWL++NA
Sbjct: 132 RIVRSAAGRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNA 191

Query: 64  KSAIDVL 67
           K+AID L
Sbjct: 192 KAAIDEL 198

[Close]
BLAST of Csor.00g160750 vs. ExPASy Swiss-Prot
Match: Q8LT05 (Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-14
Identity = 39/67 (58.21%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 4   RRLRSSAG----SGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNA 63
           R +RS+AG      KV T++G R R++RL+A TAI+FYD+QDRLGY+RP++A+DWL++NA
Sbjct: 132 RIVRSAAGRKDRHSKVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNA 191

Query: 64  KSAIDVL 67
           K+AID L
Sbjct: 192 KAAIDEL 198

[Close]
BLAST of Csor.00g160750 vs. ExPASy Swiss-Prot
Match: A2WM14 (Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-14
Identity = 36/53 (67.92%), Postives = 47/53 (88.68%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVL 67
           KV T++G R R++RLSA TAIQFYD+QDRLGY+RP++A+DWL++NAK AID L
Sbjct: 219 KVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKDAIDKL 271

[Close]
BLAST of Csor.00g160750 vs. NCBI nr
Match: KAG6583970.1 (Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268 bits (685), Expect = 1.53e-90
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MEERRLRSSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 60
           MEERRLRSSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK
Sbjct: 1   MEERRLRSSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 60

Query: 61  SAIDVLSRPLETEDGKRQPLCFESNDNECHAGGILRHAATVFKSELCNNWVTILSNVGIA 120
           SAIDVLSRPLETEDGKRQPLCFESNDNECHAGGILRHAATVFKSELCNNWVTILSNVGIA
Sbjct: 61  SAIDVLSRPLETEDGKRQPLCFESNDNECHAGGILRHAATVFKSELCNNWVTILSNVGIA 120

Query: 121 TAKRQPPDDFQT 132
           TAKRQPPDDFQT
Sbjct: 121 TAKRQPPDDFQT 132

[Close]
BLAST of Csor.00g160750 vs. NCBI nr
Match: XP_023001760.1 (transcription factor PCF8-like [Cucurbita maxima])

HSP 1 Score: 147 bits (371), Expect = 1.75e-42
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1  MEERRLRSSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 60
          MEERRLRSSAGSGKVYTSKG RAR+LRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK
Sbjct: 1  MEERRLRSSAGSGKVYTSKGLRARRLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 60

Query: 61 SAIDVLSRPLETEDGKR 77
          SAID LSRPLETEDGKR
Sbjct: 61 SAIDALSRPLETEDGKR 77

[Close]
BLAST of Csor.00g160750 vs. NCBI nr
Match: XP_008443015.1 (PREDICTED: transcription factor TCP10-like [Cucumis melo] >KAA0057025.1 transcription factor TCP10-like [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (287), Expect = 1.55e-29
Identity = 60/73 (82.19%), Postives = 65/73 (89.04%), Query Frame = 0 

Query: 4  RRLRSSAGSG--KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKS 63
          RRL SSAG+G  KVYTSKG RAR+LRLSAPTAI+FYD+QDRLG  RPTEAIDWLLQNAK 
Sbjct: 19 RRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKP 78

Query: 64 AIDVLSRPLETED 74
          AID LSRPL+TED
Sbjct: 79 AIDALSRPLQTED 91

[Close]
BLAST of Csor.00g160750 vs. NCBI nr
Match: XP_038893685.1 (transcription factor TCP10-like [Benincasa hispida])

HSP 1 Score: 114 bits (286), Expect = 2.38e-29
Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 0 

Query: 3   ERRLRSSAGS--GKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 62
           +RRLRSSAG+  GKVYTS+G RAR+ RLSAPTAI+FYD+QDRLG +RPTE +DWLL+NAK
Sbjct: 22  DRRLRSSAGAVPGKVYTSRGLRARRFRLSAPTAIEFYDVQDRLGLDRPTETMDWLLENAK 81

Query: 63  SAIDVLSRPLETEDGKRQPLCFES 84
           SAID LSRPLET D + +   F S
Sbjct: 82  SAIDALSRPLETVDRELRKQIFIS 105

[Close]
BLAST of Csor.00g160750 vs. NCBI nr
Match: XP_011653401.1 (transcription factor PCF8 [Cucumis sativus] >XP_031738333.1 transcription factor PCF8 [Cucumis sativus] >XP_031738336.1 transcription factor PCF8 [Cucumis sativus] >KGN64714.1 hypothetical protein Csa_013631 [Cucumis sativus])

HSP 1 Score: 112 bits (280), Expect = 2.26e-28
Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 8  SSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLS 67
          + AG GKVYTSKG RAR+LRLSAPTAI+FYD+QDRLG  RPTEAIDWLL NAKSAID LS
Sbjct: 27 AGAGVGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLLNAKSAIDALS 86

Query: 68 RPLETED 74
          RPL+TED
Sbjct: 87 RPLQTED 93

[Close]
BLAST of Csor.00g160750 vs. ExPASy TrEMBL
Match: A0A6J1KM30 (transcription factor PCF8-like OS=Cucurbita maxima OX=3661 GN=LOC111495803 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 8.46e-43
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1  MEERRLRSSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 60
          MEERRLRSSAGSGKVYTSKG RAR+LRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK
Sbjct: 1  MEERRLRSSAGSGKVYTSKGLRARRLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAK 60

Query: 61 SAIDVLSRPLETEDGKR 77
          SAID LSRPLETEDGKR
Sbjct: 61 SAIDALSRPLETEDGKR 77

[Close]
BLAST of Csor.00g160750 vs. ExPASy TrEMBL
Match: A0A5A7UTZ9 (Transcription factor TCP10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002100 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 7.50e-30
Identity = 60/73 (82.19%), Postives = 65/73 (89.04%), Query Frame = 0 

Query: 4  RRLRSSAGSG--KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKS 63
          RRL SSAG+G  KVYTSKG RAR+LRLSAPTAI+FYD+QDRLG  RPTEAIDWLLQNAK 
Sbjct: 19 RRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKP 78

Query: 64 AIDVLSRPLETED 74
          AID LSRPL+TED
Sbjct: 79 AIDALSRPLQTED 91

[Close]
BLAST of Csor.00g160750 vs. ExPASy TrEMBL
Match: A0A1S3B7T4 (transcription factor TCP10-like OS=Cucumis melo OX=3656 GN=LOC103486739 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 7.50e-30
Identity = 60/73 (82.19%), Postives = 65/73 (89.04%), Query Frame = 0 

Query: 4  RRLRSSAGSG--KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKS 63
          RRL SSAG+G  KVYTSKG RAR+LRLSAPTAI+FYD+QDRLG  RPTEAIDWLLQNAK 
Sbjct: 19 RRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKP 78

Query: 64 AIDVLSRPLETED 74
          AID LSRPL+TED
Sbjct: 79 AIDALSRPLQTED 91

[Close]
BLAST of Csor.00g160750 vs. ExPASy TrEMBL
Match: A0A0A0LUP1 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G077150 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 1.09e-28
Identity = 55/67 (82.09%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 8  SSAGSGKVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLS 67
          + AG GKVYTSKG RAR+LRLSAPTAI+FYD+QDRLG  RPTEAIDWLL NAKSAID LS
Sbjct: 27 AGAGVGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLLNAKSAIDALS 86

Query: 68 RPLETED 74
          RPL+TED
Sbjct: 87 RPLQTED 93

[Close]
BLAST of Csor.00g160750 vs. ExPASy TrEMBL
Match: A0A6J5UKD4 (TCP domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25215 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.03e-18
Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLSRP 69
           KVYTSKG R R+ RLSAPTAIQFYD+QDRLGY+RP++AIDWL++ AK+AI+ LS P
Sbjct: 119 KVYTSKGPRDRRFRLSAPTAIQFYDVQDRLGYDRPSKAIDWLIEKAKAAIEALSEP 174

[Close]
BLAST of Csor.00g160750 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 84.0 bits (206), Expect = 1.0e-16
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLSR--PLE 73
           KV T+KG R R++RLSAPTAIQFYD+QDRLG++RP++A+DWL+  AKSAID L++  P  
Sbjct: 55  KVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWN 114

Query: 74  TEDGKRQPLCFESN 86
             D  RQ     +N
Sbjct: 115 PADTLRQHAAAAAN 128

[Close]
BLAST of Csor.00g160750 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 14 KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLSRPLETE 73
          KV+TSKG R R++RLSA TAIQFYD+QDRLGY+RP++A+DWL++ AK+AID L     T 
Sbjct: 35 KVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLELGETTT 94

Query: 74 DGKRQ 79
             RQ
Sbjct: 95 TTTRQ 99

[Close]
BLAST of Csor.00g160750 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 34/54 (62.96%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLS 68
           KV T+KG R R++RLSA TAIQFYD+QDRLG++RP++A+DWL++ AK++ID L+
Sbjct: 51  KVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELA 104

[Close]
BLAST of Csor.00g160750 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 34/54 (62.96%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLS 68
           KV T+KG R R++RLSA TAIQFYD+QDRLG++RP++A+DWL++ AK++ID L+
Sbjct: 51  KVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELA 104

[Close]
BLAST of Csor.00g160750 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 34/54 (62.96%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 14  KVYTSKGFRARKLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKSAIDVLS 68
           KV T+KG R R++RLSA TAIQFYD+QDRLG++RP++A+DWL++ AK++ID L+
Sbjct: 51  KVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELA 104

The following BLAST results are available for this feature:
BLAST of Csor.00g160750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MAH81.4e-1556.76Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1[more]
O822771.9e-1561.54Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1[more]
A2WV681.2e-1458.21Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV... [more]
Q8LT051.2e-1458.21Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 ... [more]
A2WM141.6e-1467.92Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV... [more]
BLAST of Csor.00g160750 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583970.11.53e-90100.00Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023001760.11.75e-4296.10transcription factor PCF8-like [Cucurbita maxima][more]
XP_008443015.11.55e-2982.19PREDICTED: transcription factor TCP10-like [Cucumis melo] >KAA0057025.1 transcri... [more]
XP_038893685.12.38e-2970.24transcription factor TCP10-like [Benincasa hispida][more]
XP_011653401.12.26e-2882.09transcription factor PCF8 [Cucumis sativus] >XP_031738333.1 transcription factor... [more]
BLAST of Csor.00g160750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KM308.46e-4396.10transcription factor PCF8-like OS=Cucurbita maxima OX=3661 GN=LOC111495803 PE=4 ... [more]
A0A5A7UTZ97.50e-3082.19Transcription factor TCP10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A1S3B7T47.50e-3082.19transcription factor TCP10-like OS=Cucumis melo OX=3656 GN=LOC103486739 PE=4 SV=... [more]
A0A0A0LUP11.09e-2882.09TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G077150 PE=4 SV... [more]
A0A6J5UKD41.03e-1873.21TCP domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25215 ... [more]
BLAST of Csor.00g160750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53230.11.0e-1656.76TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 [more]
AT2G31070.11.3e-1661.54TCP domain protein 10 [more]
AT3G15030.19.5e-1562.96TCP family transcription factor 4 [more]
AT3G15030.29.5e-1562.96TCP family transcription factor 4 [more]
AT3G15030.39.5e-1562.96TCP family transcription factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 14..79
e-value: 3.4E-20
score: 73.2
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 4..66
score: 21.209827
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 9..88
NoneNo IPR availablePANTHERPTHR31072:SF158TCP FAMILY TRANSCRIPTION FACTOR TCP4coord: 9..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g160750.m01Csor.00g160750.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000032 regulation of secondary shoot formation
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding