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Csor.00g160130 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGACAAAGCTTGAGAAATCTCAAAGTTGTGGTGTTCATCTTCCTAGCTCTTGCTTCTGGTACTTGATCCTTCTCCTGATTTAGATTGACAAGTAGTGTTAAAAAGAAGGTATTTGTTTATATGAATAAGTTTGTGTTACTATTGTAGGATGGATGGTGGTGCAGACGGAGGGGCGGACTTGCTATAAACACAATGATGCATTTATAGGATCGTGCACTTCGACAGCGGCATGTGCTGACTTTTGTATTACTTTTGAGGGGTGGGATGATGGATTTTGCTCGGGTGATAAATGCACTTGTACGAAGCAATGTGCTAAGCCCATGCTTTAA ATGGCGGGACAAAGCTTGAGAAATCTCAAAGTTGTGGTGTTCATCTTCCTAGCTCTTGCTTCTGGATGGATGGTGGTGCAGACGGAGGGGCGGACTTGCTATAAACACAATGATGCATTTATAGGATCGTGCACTTCGACAGCGGCATGTGCTGACTTTTGTATTACTTTTGAGGGGTGGGATGATGGATTTTGCTCGGGTGATAAATGCACTTGTACGAAGCAATGTGCTAAGCCCATGCTTTAA ATGGCGGGACAAAGCTTGAGAAATCTCAAAGTTGTGGTGTTCATCTTCCTAGCTCTTGCTTCTGGATGGATGGTGGTGCAGACGGAGGGGCGGACTTGCTATAAACACAATGATGCATTTATAGGATCGTGCACTTCGACAGCGGCATGTGCTGACTTTTGTATTACTTTTGAGGGGTGGGATGATGGATTTTGCTCGGGTGATAAATGCACTTGTACGAAGCAATGTGCTAAGCCCATGCTTTAA MAGQSLRNLKVVVFIFLALASGWMVVQTEGRTCYKHNDAFIGSCTSTAACADFCITFEGWDDGFCSGDKCTCTKQCAKPML Homology
BLAST of Csor.00g160130 vs. ExPASy Swiss-Prot
Match: Q9C947 (Defensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDF2.4 PE=3 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 3.1e-05 Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
BLAST of Csor.00g160130 vs. ExPASy Swiss-Prot
Match: P18646 (Defensin-like protein OS=Vigna unguiculata OX=3917 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.5e-04 Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0
BLAST of Csor.00g160130 vs. NCBI nr
Match: KAG6590329.1 (Defensin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 178 bits (452), Expect = 1.27e-56 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g160130 vs. NCBI nr
Match: XP_022931766.1 (defensin Tk-AMP-D4-like [Cucurbita moschata]) HSP 1 Score: 177 bits (448), Expect = 5.19e-56 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Csor.00g160130 vs. NCBI nr
Match: XP_023520732.1 (defensin-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173 bits (439), Expect = 1.23e-54 Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0
BLAST of Csor.00g160130 vs. NCBI nr
Match: XP_022968860.1 (defensin-like protein 5 [Cucurbita maxima] >XP_022974469.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974470.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974471.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974694.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974695.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974696.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974697.1 defensin-like protein 5 [Cucurbita maxima] >XP_022974698.1 defensin-like protein 5 [Cucurbita maxima] >XP_022975267.1 defensin-like protein 5 [Cucurbita maxima] >XP_022975269.1 defensin-like protein 5 [Cucurbita maxima]) HSP 1 Score: 148 bits (373), Expect = 1.41e-44 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Csor.00g160130 vs. NCBI nr
Match: XP_022975676.1 (defensin-like protein 5 [Cucurbita maxima]) HSP 1 Score: 147 bits (370), Expect = 4.05e-44 Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Csor.00g160130 vs. ExPASy TrEMBL
Match: A0A6J1EUK4 (defensin Tk-AMP-D4-like OS=Cucurbita moschata OX=3662 GN=LOC111438039 PE=4 SV=1) HSP 1 Score: 177 bits (448), Expect = 2.51e-56 Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Csor.00g160130 vs. ExPASy TrEMBL
Match: A0A6J1IBG0 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111473130 PE=4 SV=1) HSP 1 Score: 148 bits (373), Expect = 6.83e-45 Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Csor.00g160130 vs. ExPASy TrEMBL
Match: A0A6J1IEV4 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111475548 PE=4 SV=1) HSP 1 Score: 147 bits (370), Expect = 1.96e-44 Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Csor.00g160130 vs. ExPASy TrEMBL
Match: A0A6J1IEQ9 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111475360 PE=4 SV=1) HSP 1 Score: 147 bits (370), Expect = 1.96e-44 Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Csor.00g160130 vs. ExPASy TrEMBL
Match: A0A6J1IAB8 (defensin-like protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111473131 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 2.78e-44 Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Csor.00g160130 vs. TAIR 10
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66 ) HSP 1 Score: 48.9 bits (115), Expect = 2.2e-06 Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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