Csor.00g159530 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g159530
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	luc7-like protein 3
Location	Csor_Chr15: 10945434 .. 10946244 (-)
RNA-Seq Expression	Csor.00g159530
Synteny	Csor.00g159530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCCAGAGAGCTCTTCTGGATGAAATCATGGGTTCAGGTACTCTTCTGATTCGACTTAGTAATTTTTCTTTGGAAATTTTGGTTTCAATTTGATAACATTTAGGTGTTATTGATTTTTTGATCTTGTGGAGTATCTAGTTGGAGGGGAATGGAAGTGTTTCTATTAGTTTAGAGGAATTTGGCAGGGAATGTGGGAGTATTATCCACCAGGCGTGCAATTTTTCACTTGATATTCCCCTTTTTGTGATTTCCAACATGAGTTTTCTTATTTTTAATTTTCTTTTTTCACGATTTTTGTTGCCATTTGATCTTTGTTGGTGCTTGTTTGGTTTTTTTAGCGCGTAATTTGACGGAGGAAGAAAGAAGAGGATACAAGGAAGTTATGTGGGATGATAAAGAGGTCTGTGGGTTCTATATGGTCCGGTTCTGCCCGCATCATCTTTTCGTAAATACTCGGAGCGACCTTGGTGCGTTGTTTACTTTTTTATATTAACCGTAACTCTGGTCTCTGTCAAATTTCCAAGTGGCAAAGTCCTATAAGGAGAAGTCAGTAGCAGTTGTTCTGTGTATGTTTTTAGCCTCAATGCTTATTCTTATTGGATACCGTTCTTATTTGTGTTTATAGGTCCACTTACAGTAAATATATGCTCGTTTATCCTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGACTATTGGTCTATAATGTATAGGAAGGGTAATTTGTTTCTAAGATTGGATTCTTGTTTCGTCTTTTGTATCAGGTCCTTGTCCTAGAATACATGACCAGAAATTGAAAGAAAGGTGA

mRNA sequence

ATGGACGCCCAGAGAGCTCTTCTGGATGAAATCATGGGTTCAGCGCGTAATTTGACGGAGGAAGAAAGAAGAGGATACAAGGAAGTTATGTGGGATGATAAAGAGGTCTGTGGGTTCTATATGGTCCGGTTCTGCCCGCATCATCTTTTCGTAAATACTCGGAGCGACCTTGGTCCTTGTCCTAGAATACATGACCAGAAATTGAAAGAAAGGTGA

Coding sequence (CDS)

ATGGACGCCCAGAGAGCTCTTCTGGATGAAATCATGGGTTCAGCGCGTAATTTGACGGAGGAAGAAAGAAGAGGATACAAGGAAGTTATGTGGGATGATAAAGAGGTCTGTGGGTTCTATATGGTCCGGTTCTGCCCGCATCATCTTTTCGTAAATACTCGGAGCGACCTTGGTCCTTGTCCTAGAATACATGACCAGAAATTGAAAGAAAGGTGA

Protein sequence

MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQKLKER

Homology

[Close]

BLAST of Csor.00g159530 vs. ExPASy Swiss-Prot
Match: Q3SX41 (Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-15
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 7  LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
          LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7  LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67 KLKER 72
           L+++
Sbjct: 67 NLRKQ 69

[Close]

BLAST of Csor.00g159530 vs. ExPASy Swiss-Prot
Match: O95232 (Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-15
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 7  LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
          LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7  LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67 KLKER 72
           L+++
Sbjct: 67 NLRKQ 69

[Close]

BLAST of Csor.00g159530 vs. ExPASy Swiss-Prot
Match: Q5SUF2 (Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-15
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 7  LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
          LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7  LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67 KLKER 72
           L+++
Sbjct: 67 NLRKQ 69

[Close]

BLAST of Csor.00g159530 vs. ExPASy Swiss-Prot
Match: Q5R8W6 (Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.8e-15
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 7  LLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRIHDQ 66
          LLDE+MG  RNL  +E+R    V WD + VC +Y+  FCP  LF NTRSDLGPC +IHD+
Sbjct: 7  LLDELMGRDRNLAPDEKR--SNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDE 66

Query: 67 KLKER 72
           L+++
Sbjct: 67 NLRKQ 69

[Close]

BLAST of Csor.00g159530 vs. ExPASy Swiss-Prot
Match: Q9USM4 (U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=usp106 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-10
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 4  QRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPCPRI 63
          QR +++++MGS  NL+    RG   V + D++VC  ++   CPH +F NT+ DLGPCP+I
Sbjct: 5  QRKIIEQLMGS--NLSNFTSRGL--VHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKI 64

Query: 64 HDQKLK 70
          H  KLK
Sbjct: 65 HSDKLK 66

[Close]

BLAST of Csor.00g159530 vs. NCBI nr
Match: KAG6579683.1 (Luc7-like protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156 bits (394), Expect = 4.45e-48
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC
Sbjct: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKER 71
          PRIHDQKLKER
Sbjct: 61 PRIHDQKLKER 71

[Close]

BLAST of Csor.00g159530 vs. NCBI nr
Match: KAG7017125.1 (Luc7-like protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154 bits (389), Expect = 8.10e-44
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC
Sbjct: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. NCBI nr
Match: XP_022157696.1 (luc7-like protein 3 [Momordica charantia])

HSP 1 Score: 150 bits (378), Expect = 2.77e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. NCBI nr
Match: XP_038874248.1 (luc7-like protein 3 [Benincasa hispida])

HSP 1 Score: 150 bits (378), Expect = 2.77e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. NCBI nr
Match: XP_023550802.1 (luc7-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 150 bits (378), Expect = 2.84e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. ExPASy TrEMBL
Match: A0A6J1DYY7 (luc7-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111024344 PE=3 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.34e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. ExPASy TrEMBL
Match: A0A6J1K4T0 (luc7-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491178 PE=3 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.37e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. ExPASy TrEMBL
Match: A0A6J1EMU5 (luc7-like protein 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435792 PE=3 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.37e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. ExPASy TrEMBL
Match: A0A6J1H2K0 (luc7-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459518 PE=3 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.37e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. ExPASy TrEMBL
Match: A0A6J1I420 (luc7-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111468976 PE=3 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.37e-42
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPH LFVNTRSDLGPC
Sbjct: 1  MDAQRALLDELMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHDLFVNTRSDLGPC 60

Query: 61 PRIHDQKLKE 70
          PRIHDQKLKE
Sbjct: 61 PRIHDQKLKE 70

[Close]

BLAST of Csor.00g159530 vs. TAIR 10
Match: AT5G51410.1 (LUC7 N_terminus domain-containing protein )

HSP 1 Score: 131.3 bits (329), Expect = 3.0e-31
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MG+ARNLT+EERRG+KEV WDD+EVC FYMVRFCPH LFVNT+SDLG C
Sbjct: 1  MDAQRALLDELMGAARNLTDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGAC 60

Query: 61 PRIHDQKLKE 71
           RIHD KLKE
Sbjct: 61 SRIHDPKLKE 70

[Close]

BLAST of Csor.00g159530 vs. TAIR 10
Match: AT5G51410.2 (LUC7 N_terminus domain-containing protein )

HSP 1 Score: 131.3 bits (329), Expect = 3.0e-31
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MG+ARNLT+EERRG+KEV WDD+EVC FYMVRFCPH LFVNT+SDLG C
Sbjct: 1  MDAQRALLDELMGAARNLTDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGAC 60

Query: 61 PRIHDQKLKE 71
           RIHD KLKE
Sbjct: 61 SRIHDPKLKE 70

[Close]

BLAST of Csor.00g159530 vs. TAIR 10
Match: AT5G51410.3 (LUC7 N_terminus domain-containing protein )

HSP 1 Score: 131.3 bits (329), Expect = 3.0e-31
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARNLTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLGPC 60
          MDAQRALLDE+MG+ARNLT+EERRG+KEV WDD+EVC FYMVRFCPH LFVNT+SDLG C
Sbjct: 1  MDAQRALLDELMGAARNLTDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGAC 60

Query: 61 PRIHDQKLKE 71
           RIHD KLKE
Sbjct: 61 SRIHDPKLKE 70

[Close]

BLAST of Csor.00g159530 vs. TAIR 10
Match: AT5G17440.1 (LUC7 related protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARN--LTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLG 60
          MDA R  LD +MG+ RN  +TE  R+ Y      D++VC  Y+   CPH LF  T+ D+G
Sbjct: 1  MDAMRKQLDVLMGANRNGDVTEVNRKYY------DRDVCRLYLSGLCPHELFQLTKMDMG 60

Query: 61 PCPRIHDQKLKE 71
          PCP++H  +L++
Sbjct: 61 PCPKVHSLQLRK 66

[Close]

BLAST of Csor.00g159530 vs. TAIR 10
Match: AT3G03340.1 (LUC7 related protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.7e-10
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1  MDAQRALLDEIMGSARN--LTEEERRGYKEVMWDDKEVCGFYMVRFCPHHLFVNTRSDLG 60
          MDA R  LD +MG+ RN  + E  R+ Y      D++VC  Y+   CPH LF  T+ D+G
Sbjct: 1  MDAIRKQLDVLMGANRNGDVQEVNRKYY------DRDVCRLYLSGLCPHDLFQLTKMDMG 60

Query: 61 PCPRIHDQKLKE 71
          PCP++H  +L++
Sbjct: 61 PCPKVHSLQLRK 66

The following BLAST results are available for this feature:

BLAST of Csor.00g159530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SX41	3.8e-15	53.85	Luc7-like protein 3 OS=Bos taurus OX=9913 GN=LUC7L3 PE=2 SV=1	[more]
O95232	3.8e-15	53.85	Luc7-like protein 3 OS=Homo sapiens OX=9606 GN=LUC7L3 PE=1 SV=2	[more]
Q5SUF2	3.8e-15	53.85	Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1	[more]
Q5R8W6	3.8e-15	53.85	Luc7-like protein 3 OS=Pongo abelii OX=9601 GN=LUC7L3 PE=2 SV=1	[more]
Q9USM4	1.3e-10	45.45	U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of Csor.00g159530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579683.1	4.45e-48	100.00	Luc7-like protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7017125.1	8.10e-44	100.00	Luc7-like protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022157696.1	2.77e-42	97.14	luc7-like protein 3 [Momordica charantia]	[more]
XP_038874248.1	2.77e-42	97.14	luc7-like protein 3 [Benincasa hispida]	[more]
XP_023550802.1	2.84e-42	97.14	luc7-like protein 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g159530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DYY7	1.34e-42	97.14	luc7-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111024344 PE=3 SV=1	[more]
A0A6J1K4T0	1.37e-42	97.14	luc7-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111491178 PE=3 SV=1	[more]
A0A6J1EMU5	1.37e-42	97.14	luc7-like protein 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435792 PE=...	[more]
A0A6J1H2K0	1.37e-42	97.14	luc7-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459518 PE=3 SV=1	[more]
A0A6J1I420	1.37e-42	97.14	luc7-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111468976 PE=3 SV=1	[more]

BLAST of Csor.00g159530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51410.1	3.0e-31	82.86	LUC7 N_terminus domain-containing protein	[more]
AT5G51410.2	3.0e-31	82.86	LUC7 N_terminus domain-containing protein	[more]
AT5G51410.3	3.0e-31	82.86	LUC7 N_terminus domain-containing protein	[more]
AT5G17440.1	1.2e-11	43.06	LUC7 related protein	[more]
AT3G03340.1	1.7e-10	41.67	LUC7 related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004882	Luc7-related	PFAM	PF03194	LUC7	coord: 2..70 e-value: 2.9E-29 score: 102.5
IPR004882	Luc7-related	PANTHER	PTHR12375	RNA-BINDING PROTEIN LUC7-RELATED	coord: 1..70
None	No IPR available	PANTHER	PTHR12375:SF47	ARGININE-ASPARTATE-RICH RNA BINDING PROTEIN-LIKE	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g159530.m01	Csor.00g159530.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006376	mRNA splice site selection
cellular_component	GO:0005685	U1 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0003729	mRNA binding