Csor.00g158560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g158560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RNA-binding protein with multiple splicing
Location	Csor_Chr08: 5330297 .. 5333176 (+)
RNA-Seq Expression	Csor.00g158560
Synteny	Csor.00g158560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCATCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTACTTTATTTCCTCTCTTCATCTTTCTTAATTTGTAGTACTCAACTCAGGATCTTAGGCAGTTCAAGATTCGACTAGAGGTTTTACCGAGTTCGGAGTTTCAATGGATTTGTTTTTGTGTTTTCTTGAATTCGGCTTGTTATAGCTGGTTATGTGTAGTTATTTTAGGTTATTCTGCTCAAGTAATCGTCGTGGAAAACTTTGATGGTTTCTTTCTGCTATTCGATGCTCTCTGAGGCCATTTCTTTTTTAATGTTGTGTTGTTTTAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGACGCCCTTCAGGTTCATGTCTTTGCCTCACTGTTTTGTTTACTGATCTTGAATTGTCAATGTTGAAGTGTTGGTTGCTTTGATCTTTGTGATTTAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGTGATCTACTAGCTTTTATGATTCTCTTCTGCTTATTCACTAGGACTTTCTTGTGAAGTAGTGATGTCCTCCAATAACGCACACATTCGTACTTAGAACAGTTACAGATTACCTTCAGTTTTTTTCTCTTTTGTTGTGCAATGATTTCAAGCTTTAAACACTTCGTTGCTCTTTTTTCTTTTTAAACAAAGAAAGAAGCAAAATATTGCTTGATTTGCTAATCTTCGTACTACTTGCAGGCATTGTTGCTGATGCAGATGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTGAGTCTTCTCTTTATGAAAACTGCTTTCCCTTCGAAGTCAGTTGTATGTGTTCACCTGAGAGATGTTTATGGTTATGGAAAAGGAGTAGGATTCGTTAAGAGCTCAATTTTCTCTTGTTCTTAGCCTTTTGTGGTTGTTTTGTTTGCTCCCACCCTCGCCAAATGGCACTGAGTTGTGATGTTCAAGTTCCTTGTGGTTTGTGATGAACTAGGTATATGGCTCCACCTCCTCCTCCATATGATCCGTATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAGGTAATCCTCTTACAATCTTGATGGCACATTGAACTTTGGCATCGCTTTCTTGCAACGACCATCCCTGGAATAGAAGGCTTTATTTACTATAACTATTGAAGTTGTAACCATGAAGACATCATGGAGTGCCTTGACTTATTGTTTCCACTGGGAAAAGAATAACTTTTGTTGCGTGGATTATATCTCATTTTTCTCCCGTTTCCTACAGAACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTGTATATAAATCTCATCTTTGCACAATTTTTCAATTGTATAATCACGTGTATGAATCATCCCAACCAACTGAATGTTTTGGACCTCTGGTTCTGACATATCATGCAGACAACCGGGATTTAAGCAAATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGTAAGTAGGTTTTAGTTGACTTGACTGTTGATCATTTAATGTCATGTTCAGGTTAAGGATTATCAACCTTCCTTTCCTGCCTTCTAATTTGTTGTCTGCTTCACCTATATAGGATGTGAACACTGCCTCCAATGTGCATCATCTTTTGCAGGGTGCTGTTATTCCTAGTTCTGGCTCTGTGGGCATGAGAATACAATATCCTTTTCTTTACTAAATTGTTTTGTTTGATGCTAGTTATAGAACGATCATATCATCATACTGGTACTTCTGAATAGTAAGTTGCTGTTTCGCTTGACAATGCAAGTGTTGGACTGAATGATTTATCTTATTTGATGGCTGGCTTGTGCCACTTTAGGTAATAATCTGGGAATCTTTTTAAATCTGTAGAATGCATCTCGGTAAAGAAAATTAGTGCGTATCATGTCTGCTACGTTTGAGGTATTTTATTGGATAGGCTTTTTTGTATTTGATGTCTGTTTTATATTTTAAGGTCACTATGGAATTCGATATATTAGTACACGTGTCTGTTAATAAGGAATAATTTTTTTCCCTTTTCAGTAACCTTTCCTAGAAATTAGATTCATGCATTTTTTGTTGAATGTGTTGCTTTACGTCATTAGCAATTAACTATCATGTTAACTATTAGGTTTTGTTTCAAAGATTGAAATGCAATTCTTGTTGATGCCCATCAACGTTTGTGATCTAGGTAATACAAACATGTGCATAATGTGATTTCATCAACCAGGCTTAGTTGCACAGCAATTTGAACTAGTTGTTATTTCATTTATTGTTGCTTTCATGATTGAGGATAAATGTTTCTTCTCTTGACTCTACGAATACATTTTCGAAGAACCCGTTTGGTAAACGGAAAGATGCTACCTATCCTGTTTCTGCTCCTGGCGCCAATGGAAGTCCACATGCTATGGCATACCAATAG

mRNA sequence

ATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCATCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGACGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAGATGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTATATGGCTCCACCTCCTCCTCCATATGATCCGTATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAGAACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTACAACCGGGATTTAAGCAAATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGATGTGAACACTGCCTCCAATGTGCATCATCTTTTGCAGGGTGCTGTTATTCCTAGTTCTGGCTCTGTGGGCATGAGAATACAATTTTCGAAGAACCCGTTTGGTAAACGGAAAGATGCTACCTATCCTGTTTCTGCTCCTGGCGCCAATGGAAGTCCACATGCTATGGCATACCAATAG

Coding sequence (CDS)

ATGGCCGGTACTGGAATCCACCCGTACCACCACCAATGGTCTCCGGCGGCTGCCCCTCCTCCTCCGCCACAAGCCACTGCCATCGCTCCTCCTCCTATTCCCTATCCCCATCCTTCTCACATCCTCGTCGACAACCCCGCCCGTCATGCCTCCGATGAGGTTCGGACTATATTTCTAACAGGTCTTCCGGAAGATGTGAAAGAGAGAGAGCTACAGAATCTTCTCAGATGGTTACCTGGTTACGAGGCTTCGCAAGTAAATTTTAAAGGTGAAAAGCCTATGGGCTTTGCTCTCTTTTCCAACGCTCAGCTTGCTATTGCTGCGAAAGACGCCCTTCAGGATATGGTTTTTGATGCGGAGTCTAAGTCAGTGTTGCACACGGAGATGGCCAAGAAAAATCTTTTTGTTAAACGAGGCATTGTTGCTGATGCAGATGCTTATGACCAAAGTAAACGTTTGAGAACTGGTGGTGAATATGCCCACACCGGGTATTCGAGCCCATCACCATTTCATGCACCTCCACCCCCTATTTGGGGACCTCACGGGTATATGGCTCCACCTCCTCCTCCATATGATCCGTATGGAAGTTACCCTGTTCATCCTGTACCTATGCCTGCTCCTGCACCTGTACCAGCACCTTGCAGCTATGTGCCTGTTCAGAACACAAAAGATAATCCTCCTTGCAATACACTGTTCATTGGCAATCTGGGGGAAAATGTAAATGAAGAGGAGCTCAGAGGTCTTTTTAGCGTACAACCGGGATTTAAGCAAATGAAGACTCTGAGGCAGGAAAGGCATAAAGTCTGTTTCATTGAATTTGAAGATGTGAACACTGCCTCCAATGTGCATCATCTTTTGCAGGGTGCTGTTATTCCTAGTTCTGGCTCTGTGGGCATGAGAATACAATTTTCGAAGAACCCGTTTGGTAAACGGAAAGATGCTACCTATCCTGTTTCTGCTCCTGGCGCCAATGGAAGTCCACATGCTATGGCATACCAATAG

Protein sequence

MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ

Homology

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BLAST of Csor.00g158560 vs. ExPASy Swiss-Prot
Match: P34761 (Protein WHI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=WHI3 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.1e-14
Identity = 48/121 (39.67%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 218 PVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQM----KTLRQERHK---VCF 277
           P      NPPCNTL++GNL  +  E+ELR LFS Q GF+++    K      H    +CF
Sbjct: 527 PANPADQNPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCF 586

Query: 278 IEFEDVNTASNVHHLLQGAVIPS---SGSVGMRIQFSKNPFGKRKDATYPVSAPGANGSP 329
           +EF+DV+ A+     L G  +P    S   G+R+ FSKNP G R     P S  G +G+P
Sbjct: 587 VEFDDVSFATRALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVRG----PNSRRGGSGNP 643

[Close]

BLAST of Csor.00g158560 vs. ExPASy Swiss-Prot
Match: Q07655 (Protein WHI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=WHI4 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.3e-12
Identity = 51/147 (34.69%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 195 GSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPG 254
           GS  +    +   A VP P +         NPPCNTL++GNL  +  E+ELR LFS Q G
Sbjct: 504 GSTTISQADLSLLAKVPPPAN-----PADQNPPCNTLYVGNLPPDATEQELRQLFSNQQG 563

Query: 255 FKQM---KTLRQERH-------KVCFIEFEDVNTASNVHHLLQGAVIPS-----SGSVGM 314
           F+++     +    H        +CF+EFEDV+ A+     L G+ +P      +   G+
Sbjct: 564 FRRLSFRNKMNSHGHGNGHGHGPICFVEFEDVSFATRALAELYGSQLPHPRPSLNNKGGI 623

Query: 315 RIQFSKNPFGKRKDATYPVSAPGANGS 327
           R+ FSKNP G R   +   S    NGS
Sbjct: 624 RLSFSKNPLGVRGSNSRSKSGYSFNGS 645

[Close]

BLAST of Csor.00g158560 vs. ExPASy Swiss-Prot
Match: O74452 (Cell wall integrity protein scw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=scw1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 0


Query: 125 LHTEMAKKNLFVKRGIVADA-DAYDQSKRLRTGGEYAHTGYSSPSPFHAPP--PPIWGPH 184
           ++T +A+  L  ++G  A   ++  QS   R     A++ +S+ SP   PP  P     +
Sbjct: 328 INTNVARNYLSSEKGYSAHTQNSSAQSPHPRVFS--ANSAFSTTSP---PPLTPSTSRDY 387

Query: 185 GYMAPPPPPYDPYGSY-PVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 244
            + A    P  P+ +Y   H +    PA  P             NPPCNT+++GNL  + 
Sbjct: 388 PFSASTISPSTPFSAYSSSHGIHQRIPASTP-----TNTNPADQNPPCNTIYVGNLPPST 447

Query: 245 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 304
           +EEEL+ LFS Q G+K++    +    +CF+EFE++  A      LQG  + SS   G+R
Sbjct: 448 SEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNLQGVCLSSSIKGGIR 507

Query: 305 IQFSKNPFGKRKDAT 316
           + FSKNP G R  ++
Sbjct: 508 LSFSKNPLGVRSSSS 512

[Close]

BLAST of Csor.00g158560 vs. ExPASy Swiss-Prot
Match: Q6DH13 (RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.3e-08
Identity = 57/185 (30.81%), Postives = 83/185 (44.86%), Query Frame = 0


Query: 45  NPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQL 104
           N +    +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   
Sbjct: 10  NTSVSLEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSG 69

Query: 105 AIAAKDALQDMVFDAESKSVLHTEMAKKNL-FVKRGIVADADAYDQSKRLRTGGEY-AHT 164
           A AAK+AL  + FD ES   L  E AK N    K  ++A  +  +    L  G  + A  
Sbjct: 70  AEAAKNALNGIRFDPESPQTLRLEFAKANTKMAKSKLMATPNPSNLHPAL--GAHFIARD 129

Query: 165 GYSSPSPFHAP-PPPIWGPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQN 224
            Y        P  P  W P+        P  P+ ++  +P    A A + A   + P  +
Sbjct: 130 PYDLTGAALIPASPEAWAPYPLYTTELTPGLPHAAF-TYPAAAAAAAALHAQMRWYPSPS 189

Query: 225 TKDNP 227
               P
Sbjct: 190 ESSQP 191

[Close]

BLAST of Csor.00g158560 vs. ExPASy Swiss-Prot
Match: Q9WVB0 (RNA-binding protein with multiple splicing OS=Mus musculus OX=10090 GN=Rbpms PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 7.3e-08
Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = 0


Query: 52  DEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDA 111
           +EVRT+F++GLP D+K REL  L R   GYE S +    ++P+GF  F +   A AAK+A
Sbjct: 21  EEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNA 80

Query: 112 LQDMVFDAESKSVLHTEMAKKNL-FVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPF 171
           L  + FD E    L  E AK N    K  +V   +                   S+P P 
Sbjct: 81  LNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGTPNP------------------STPLPN 140

Query: 172 HAPPPPIWGPHGYMAPPPPPYDP--YGSYPVHPVPMPAPAPVPAPCSY 217
             P      P+    P   P  P  +  YP++P  +    P PA  +Y
Sbjct: 141 TVPQFIAREPYELTVPALYPSSPEVWAPYPLYPAELAPALPPPAAFTY 170

[Close]

BLAST of Csor.00g158560 vs. NCBI nr
Match: XP_022964124.1 (RNA-binding protein with multiple splicing 2-like [Cucurbita moschata] >KAG6593591.1 hypothetical protein SDJN03_13067, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 676 bits (1743), Expect = 3.73e-245
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60
           MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT
Sbjct: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60

Query: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120
           GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE
Sbjct: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120

Query: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180
           SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP
Sbjct: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180

Query: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240
           HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV
Sbjct: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240

Query: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300
           NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Sbjct: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300

Query: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ
Sbjct: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333

[Close]

BLAST of Csor.00g158560 vs. NCBI nr
Match: XP_023515333.1 (RNA-binding protein with multiple splicing 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 675 bits (1742), Expect = 5.30e-245
Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60
           MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRT+FLT
Sbjct: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTVFLT 60

Query: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120
           GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE
Sbjct: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120

Query: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180
           SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP
Sbjct: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180

Query: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240
           HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV
Sbjct: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240

Query: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300
           NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Sbjct: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300

Query: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ
Sbjct: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333

[Close]

BLAST of Csor.00g158560 vs. NCBI nr
Match: XP_022999922.1 (RNA-binding protein with multiple splicing 2-like [Cucurbita maxima])

HSP 1 Score: 669 bits (1726), Expect = 1.46e-242
Identity = 331/333 (99.40%), Postives = 331/333 (99.40%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60
           MAGTGIHPYHHQWS AAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT
Sbjct: 1   MAGTGIHPYHHQWSAAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60

Query: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120
           GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE
Sbjct: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120

Query: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180
           SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPP PIWGP
Sbjct: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPRPIWGP 180

Query: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240
           HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV
Sbjct: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240

Query: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300
           NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Sbjct: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300

Query: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ
Sbjct: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333

[Close]

BLAST of Csor.00g158560 vs. NCBI nr
Match: XP_038898734.1 (RNA-binding protein with multiple splicing 2 [Benincasa hispida])

HSP 1 Score: 619 bits (1595), Expect = 1.40e-222
Identity = 311/335 (92.84%), Postives = 316/335 (94.33%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIF 60
           MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF
Sbjct: 1   MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPQ-ILVDNPGRHASDEVRTIF 60

Query: 61  LTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFD 120
           +TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQ AIAAKDALQDMVFD
Sbjct: 61  ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 121 AESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIW 180
           AESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIW
Sbjct: 121 AESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 181 GPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGE 240
           GPHGYMAPPPPPYDPYG YPV PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGE
Sbjct: 181 GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 241 NVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG 300
           NVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVNTA+NVHH LQGAVIPSSGSVG
Sbjct: 241 NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNTATNVHHSLQGAVIPSSGSVG 300

Query: 301 MRIQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           MRIQFSKNPFGKRKDATYPVSAPGANG+P AMAYQ
Sbjct: 301 MRIQFSKNPFGKRKDATYPVSAPGANGTPQAMAYQ 334

[Close]

BLAST of Csor.00g158560 vs. NCBI nr
Match: XP_008462228.1 (PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo])

HSP 1 Score: 617 bits (1592), Expect = 4.18e-222
Identity = 308/335 (91.94%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIF 60
           MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF
Sbjct: 1   MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60

Query: 61  LTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFD 120
           +TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQ AIAAKDALQDMVFD
Sbjct: 61  ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 121 AESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIW 180
           AESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIW
Sbjct: 121 AESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 181 GPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGE 240
           GPHGYMAPPPPPYDPYG YPV PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGE
Sbjct: 181 GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 241 NVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG 300
           NVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Sbjct: 241 NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300

Query: 301 MRIQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           MRIQFSKNPFGKRKDA YPVSAPG NG+P AMAYQ
Sbjct: 301 MRIQFSKNPFGKRKDAAYPVSAPGVNGTPQAMAYQ 335

[Close]

BLAST of Csor.00g158560 vs. ExPASy TrEMBL
Match: A0A6J1HM77 (RNA-binding protein with multiple splicing 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464244 PE=4 SV=1)

HSP 1 Score: 676 bits (1743), Expect = 1.80e-245
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60
           MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT
Sbjct: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60

Query: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120
           GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE
Sbjct: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120

Query: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180
           SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP
Sbjct: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180

Query: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240
           HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV
Sbjct: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240

Query: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300
           NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Sbjct: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300

Query: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ
Sbjct: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333

[Close]

BLAST of Csor.00g158560 vs. ExPASy TrEMBL
Match: A0A6J1KC37 (RNA-binding protein with multiple splicing 2-like OS=Cucurbita maxima OX=3661 GN=LOC111494257 PE=4 SV=1)

HSP 1 Score: 669 bits (1726), Expect = 7.05e-243
Identity = 331/333 (99.40%), Postives = 331/333 (99.40%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60
           MAGTGIHPYHHQWS AAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT
Sbjct: 1   MAGTGIHPYHHQWSAAAAPPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIFLT 60

Query: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120
           GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE
Sbjct: 61  GLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAE 120

Query: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGP 180
           SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPP PIWGP
Sbjct: 121 SKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPRPIWGP 180

Query: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240
           HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV
Sbjct: 181 HGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENV 240

Query: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300
           NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR
Sbjct: 241 NEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMR 300

Query: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ
Sbjct: 301 IQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333

[Close]

BLAST of Csor.00g158560 vs. ExPASy TrEMBL
Match: A0A1S3CH02 (RNA-binding protein with multiple splicing OS=Cucumis melo OX=3656 GN=LOC103500634 PE=4 SV=1)

HSP 1 Score: 617 bits (1592), Expect = 2.02e-222
Identity = 308/335 (91.94%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIF 60
           MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF
Sbjct: 1   MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60

Query: 61  LTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFD 120
           +TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQ AIAAKDALQDMVFD
Sbjct: 61  ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 121 AESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIW 180
           AESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIW
Sbjct: 121 AESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 181 GPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGE 240
           GPHGYMAPPPPPYDPYG YPV PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGE
Sbjct: 181 GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 241 NVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG 300
           NVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Sbjct: 241 NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300

Query: 301 MRIQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           MRIQFSKNPFGKRKDA YPVSAPG NG+P AMAYQ
Sbjct: 301 MRIQFSKNPFGKRKDAAYPVSAPGVNGTPQAMAYQ 335

[Close]

BLAST of Csor.00g158560 vs. ExPASy TrEMBL
Match: A0A0A0K6S7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447920 PE=4 SV=1)

HSP 1 Score: 616 bits (1588), Expect = 8.23e-222
Identity = 307/335 (91.64%), Postives = 312/335 (93.13%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIF 60
           MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF
Sbjct: 1   MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60

Query: 61  LTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFD 120
           +TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQ AIAAKDALQDMVFD
Sbjct: 61  ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 121 AESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIW 180
           AESKSVLHTEMAKKNLFVKRGIVADA  YDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIW
Sbjct: 121 AESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 181 GPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGE 240
           GPHGYMAPPPPPYDPYG YPV PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGE
Sbjct: 181 GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 241 NVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG 300
           NVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Sbjct: 241 NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300

Query: 301 MRIQFSKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           MRIQFSKNPFGKRKDA YPVSAPG NG+P AMAYQ
Sbjct: 301 MRIQFSKNPFGKRKDAAYPVSAPGVNGTPQAMAYQ 335

[Close]

BLAST of Csor.00g158560 vs. ExPASy TrEMBL
Match: A0A5A7V0M8 (RNA-binding protein with multiple splicing OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00740 PE=4 SV=1)

HSP 1 Score: 606 bits (1562), Expect = 8.75e-218
Identity = 305/339 (89.97%), Postives = 311/339 (91.74%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAA--PPPPPQATAIAPPPIPYPHPSHILVDNPARHASDEVRTIF 60
           MAGTGIHPYH QW  AAA  PPPPPQA A APPPIP+PHP  ILVDNP RHASDEVRTIF
Sbjct: 1   MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60

Query: 61  LTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMVFD 120
           +TGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQ AIAAKDALQDMVFD
Sbjct: 61  ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120

Query: 121 AESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIW 180
           AESKSVLHTEMAKKNLFVKRGIVADA AYDQSKRLRTGG+YAHTGYSSPSPFHAPPPPIW
Sbjct: 121 AESKSVLHTEMAKKNLFVKRGIVADASAYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180

Query: 181 GPHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGE 240
           GPHGYMAPPPPPYDPYG YPV PVPMPAPAPVPAP SYVPVQNTKDNPPCNTLFIGNLGE
Sbjct: 181 GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240

Query: 241 NVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVG 300
           NVNEEELRGLFSVQPGFKQMK LRQERH VCFIEFEDVN A+NVHH LQGAVIPSSGSVG
Sbjct: 241 NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300

Query: 301 MRIQF----SKNPFGKRKDATYPVSAPGANGSPHAMAYQ 333
           MRIQ+      NPFGKRKDA YPVSAPG NG+P AMAYQ
Sbjct: 301 MRIQYPFLYQINPFGKRKDAAYPVSAPGVNGTPQAMAYQ 339

[Close]

BLAST of Csor.00g158560 vs. TAIR 10
Match: AT3G21215.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 489.6 bits (1259), Expect = 2.0e-138
Identity = 252/342 (73.68%), Postives = 279/342 (81.58%), Query Frame = 0


Query: 1   MAGTGIHPYHHQWSPAAAPPPPPQATAIAPPPIP----YPHPSHILVDNPARHASDEVRT 60
           MAG GIHPYH QW PA APPPP   ++ APP  P    +P P  +LVDN  R   DE+RT
Sbjct: 1   MAGAGIHPYHQQWPPAGAPPPPAAVSSAAPPHPPPIHHHPPPPPVLVDNHNRPPYDELRT 60

Query: 61  IFLTGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQLAIAAKDALQDMV 120
           IF+ GLP+DVKEREL NLLRWLPGYEASQVNFKGEKPMGFALFS AQ A+AAKD LQ MV
Sbjct: 61  IFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHMV 120

Query: 121 FDAESKSVLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPP 180
           FDAESKSV+HTEMAKKNLFVKRGIV D++AYDQSKRLRTGG+  H+ Y SPSPFH PPPP
Sbjct: 121 FDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVY-SPSPFHPPPPP 180

Query: 181 IWG-PHGYMAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGN 240
           +WG PHGYMAP PPPYDPY  Y   PVPMP P P+ AP SYVPVQN KDNPPCNTLFIGN
Sbjct: 181 VWGPPHGYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQNIKDNPPCNTLFIGN 240

Query: 241 LGENVNEEELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSG 300
           LGEN+NEEELR L S QPGFKQMK LRQERH VCFIEFEDVN+A+NVHH LQGAVIPSSG
Sbjct: 241 LGENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSG 300

Query: 301 SVGMRIQFSKNPFGKRKD----ATYPVSAPGANGSPHAMAYQ 334
           S+GMRIQ+SKNP+GKRK+    + +P  +P ANG+  A+ YQ
Sbjct: 301 SIGMRIQYSKNPYGKRKEGGGYSFFP--SPSANGAQGALTYQ 339

[Close]

BLAST of Csor.00g158560 vs. TAIR 10
Match: AT2G42240.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-34
Identity = 117/311 (37.62%), Postives = 158/311 (50.80%), Query Frame = 0


Query: 9   YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPE 68
           Y H   PA  PPPPP    ++P PI   H    P+H+ +      A DEVRT+F+ GLPE
Sbjct: 8   YSHYNLPAMVPPPPP---GVSPIPITSAHSVYLPTHVSIG-----ARDEVRTLFVAGLPE 67

Query: 69  DVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKS 128
           DVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q A+A   AL  MVFD E  S
Sbjct: 68  DVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHS 127

Query: 129 VLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGY 188
            LH ++AK N   KR      D ++  K+L++      +G+ S   F  P          
Sbjct: 128 TLHIDLAKSNPKSKRS--RTDDGWESLKKLKSWNTTTESGFGS---FQTP---------- 187

Query: 189 MAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEE 248
                  Y+  G  P     + A     AP S  P   +K   PC TLFI N+G N  E 
Sbjct: 188 -GMSSSAYNTIGYSPAQSQGI-ANVAGRAPTSRKP---SKAADPCPTLFIANMGPNCTEA 247

Query: 249 ELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS--GSVGMRI 308
           EL  +FS   GF ++K        V F++F+DV+ +S   H LQG V+ SS  G V +R+
Sbjct: 248 ELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEV-LRL 289

Query: 309 QFSKNPFGKRK 313
           Q++++  G RK
Sbjct: 308 QYARSRMGMRK 289

[Close]

BLAST of Csor.00g158560 vs. TAIR 10
Match: AT2G42240.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-32
Identity = 114/302 (37.75%), Postives = 152/302 (50.33%), Query Frame = 0


Query: 9   YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPE 68
           Y H   PA  PPPPP    ++P PI   H    P+H+ +      A DEVRT+F+ GLPE
Sbjct: 8   YSHYNLPAMVPPPPP---GVSPIPITSAHSVYLPTHVSIG-----ARDEVRTLFVAGLPE 67

Query: 69  DVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKS 128
           DVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q A+A   AL  MVFD E  S
Sbjct: 68  DVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHS 127

Query: 129 VLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGY 188
            LH ++AK N   KR      D ++  K+L++      +G+ S   F  P          
Sbjct: 128 TLHIDLAKSNPKSKRS--RTDDGWESLKKLKSWNTTTESGFGS---FQTP---------- 187

Query: 189 MAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEE 248
                  Y+  G  P     + A     AP S  P   +K   PC TLFI N+G N  E 
Sbjct: 188 -GMSSSAYNTIGYSPAQSQGI-ANVAGRAPTSRKP---SKAADPCPTLFIANMGPNCTEA 247

Query: 249 ELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS--GSVGMRI 304
           EL  +FS   GF ++K        V F++F+DV+ +S   H LQG V+ SS  G V +R+
Sbjct: 248 ELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEV-LRL 280

[Close]

BLAST of Csor.00g158560 vs. TAIR 10
Match: AT2G42240.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 136.0 bits (341), Expect = 5.7e-32
Identity = 110/291 (37.80%), Postives = 145/291 (49.83%), Query Frame = 0


Query: 9   YHHQWSPAAAPPPPPQATAIAPPPIPYPH----PSHILVDNPARHASDEVRTIFLTGLPE 68
           Y H   PA  PPPPP    ++P PI   H    P+H+ +      A DEVRT+F+ GLPE
Sbjct: 8   YSHYNLPAMVPPPPP---GVSPIPITSAHSVYLPTHVSIG-----ARDEVRTLFVAGLPE 67

Query: 69  DVKERELQNLLRWLPGYEASQV-NFKGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKS 128
           DVK RE+ NL R  PGYE S + +  G KP  FA+FS+ Q A+A   AL  MVFD E  S
Sbjct: 68  DVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAVMHALNGMVFDLEKHS 127

Query: 129 VLHTEMAKKNLFVKRGIVADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGY 188
            LH ++AK N   KR      D ++  K+L++      +G+ S   F  P          
Sbjct: 128 TLHIDLAKSNPKSKRS--RTDDGWESLKKLKSWNTTTESGFGS---FQTP---------- 187

Query: 189 MAPPPPPYDPYGSYPVHPVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEE 248
                  Y+  G  P     + A     AP S  P   +K   PC TLFI N+G N  E 
Sbjct: 188 -GMSSSAYNTIGYSPAQSQGI-ANVAGRAPTSRKP---SKAADPCPTLFIANMGPNCTEA 247

Query: 249 ELRGLFSVQPGFKQMKTLRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSS 295
           EL  +FS   GF ++K        V F++F+DV+ +S   H LQG V+ SS
Sbjct: 248 ELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSS 270

[Close]

BLAST of Csor.00g158560 vs. TAIR 10
Match: AT3G13700.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 92.4 bits (228), Expect = 7.2e-19
Identity = 84/291 (28.87%), Postives = 135/291 (46.39%), Query Frame = 0


Query: 35  YPHPSH------ILVDNPARHASDEVRTIFLTGLPEDVKERELQNLLRWLPGYEASQVNF 94
           + HP H      +L D P       + T+F++GLP DVK RE+ NL R   G+E+ Q+ +
Sbjct: 16  HSHPHHLPPQLPLLADEPG-----AINTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKY 75

Query: 95  --KGEKPMGFALFSNAQLAIAAKDALQDMVFDAESKSVLHTEMAKKNLFVKRG------I 154
             +G++ + FA F++ + A+AA + L  + FD ++ S LH E+A+ N   K        +
Sbjct: 76  TGRGDQVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYV 135

Query: 155 VADADAYDQSKRLRTGGEYAHTGYSSPSPFHAPPPPIWGPHGYMAPPPPPYDPYGSYPVH 214
           V D    + SK   +  + +  G S P     P        G    P             
Sbjct: 136 VIDNRNKEISK---SQDDQSDEGDSDPDEVQEP--------GNSDSPKENDTTKSEADSE 195

Query: 215 PVPMPAPAPVPAPCSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFKQMKT 274
           P    + AP          +       C+TLFI NLG N  E+EL+ L S  PGF  +K 
Sbjct: 196 P---DSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKI 255

Query: 275 LRQERHKVCFIEFEDVNTASNVHHLLQGAVIPSSGSVGMRIQFSKNPFGKR 312
             +    V F +FE++  A++  + LQG ++ SS   GM I+++++   K+
Sbjct: 256 RARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIEYARSKMRKQ 287

The following BLAST results are available for this feature:

BLAST of Csor.00g158560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34761	3.1e-14	39.67	Protein WHI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
Q07655	8.3e-12	34.69	Protein WHI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
O74452	1.1e-11	31.79	Cell wall integrity protein scw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q6DH13	7.3e-08	30.81	RNA-binding protein, mRNA-processing factor 2a OS=Danio rerio OX=7955 GN=rbpms2a...	[more]
Q9WVB0	7.3e-08	32.14	RNA-binding protein with multiple splicing OS=Mus musculus OX=10090 GN=Rbpms PE=...	[more]

BLAST of Csor.00g158560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964124.1	3.73e-245	100.00	RNA-binding protein with multiple splicing 2-like [Cucurbita moschata] >KAG65935...	[more]
XP_023515333.1	5.30e-245	99.70	RNA-binding protein with multiple splicing 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022999922.1	1.46e-242	99.40	RNA-binding protein with multiple splicing 2-like [Cucurbita maxima]	[more]
XP_038898734.1	1.40e-222	92.84	RNA-binding protein with multiple splicing 2 [Benincasa hispida]	[more]
XP_008462228.1	4.18e-222	91.94	PREDICTED: RNA-binding protein with multiple splicing [Cucumis melo]	[more]

BLAST of Csor.00g158560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HM77	1.80e-245	100.00	RNA-binding protein with multiple splicing 2-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KC37	7.05e-243	99.40	RNA-binding protein with multiple splicing 2-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A1S3CH02	2.02e-222	91.94	RNA-binding protein with multiple splicing OS=Cucumis melo OX=3656 GN=LOC1035006...	[more]
A0A0A0K6S7	8.23e-222	91.64	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447920 PE=4 SV...	[more]
A0A5A7V0M8	8.75e-218	89.97	RNA-binding protein with multiple splicing OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Csor.00g158560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21215.1	2.0e-138	73.68	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.1	3.6e-34	37.62	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.2	2.6e-32	37.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G42240.3	5.7e-32	37.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13700.2	7.2e-19	28.87	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 56..126 e-value: 0.035 score: 19.5 coord: 230..302 e-value: 5.2E-7 score: 39.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 57..118 e-value: 2.5E-4 score: 20.8 coord: 231..291 e-value: 2.9E-8 score: 33.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 229..306 score: 11.485845
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 49..136 e-value: 3.3E-16 score: 61.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 216..306 e-value: 1.4E-19 score: 72.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..33
None	No IPR available	PANTHER	PTHR10501:SF49	CELL WALL INTEGRITY PROTEIN SCW1	coord: 1..306
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 1..306
None	No IPR available	CDD	cd12420	RRM_RBPMS_like	coord: 55..128 e-value: 5.20647E-35 score: 120.452
None	No IPR available	CDD	cd12245	RRM_scw1_like	coord: 227..305 e-value: 1.29869E-42 score: 140.417
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 53..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g158560.m01	Csor.00g158560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding