Csor.00g158090 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g158090
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description40S ribosomal S3-like protein
LocationCsor_Chr08: 5024325 .. 5028752 (-)
RNA-Seq ExpressionCsor.00g158090
SyntenyCsor.00g158090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTCAGATGAGCAAGAAGCGAAAGGTTAGTATTGGGTTTGATTCTTCATTTTATCTTTTTCACGTCGCGCAGATATTCTGACCATTTTGATGGTTTCGAAACTTATTTGATTCACTCGGATATAGTTTGTGGCCGATGGAGTGTTCTTTGCTGAGCTTAACGAAGTTCTCACCAGAGAGCTTGCAGAGGATGGATACTCTGGAGTTGAGGTTAGGGTCACTCCCATGCGGACTGAGATTATTATCAGGGCTACTCGTACTCAAAATGTTCTTGGTAAGAGGCCTTTCTCTTATAGATTTGATTGTGTAGCTTGCGAATTTTGGGAATGATTTGGGAAAACAGGAGTTTGATTTTGTTTCATTTCAAGTTACTGCTACAAGTACTTTTTATTTTTTTACTTTTGTTCTTTGCACCTCTTTCTTTAGTTTTACTTTTTTGCATCAGATTGTTCAAGTTCGTAATCATTCTATGATTCTTGTAAAATTCTCACGAGGTGGAATCTCGAATTTTTAGGATTTGTAGAATTGTAGAGAGGCGTATGGAATTGTGTTGATGTGTTAGTGATTTGAGACTTGATAAGACCACAGAGACTGGGTTGTTTGTTCTTGCATTTAACTTCAGGAAATAAAGCGACGGAGGTGGAGGTTAAGTACGATGTTCAGTTCAATTGTGTTTGTTGGTGCTGATAGCTTGACATAGTTACAGTTTTCTTCGTTCAGAGGGGGTTTTGGAGCTGTTTGATTGATTTAGTTTTTTAAGTTTAATATTTTTGGGGGATATAGATATGAATGTTATTTACTCTGTTGAATTGATAATGCATGTAAAATATCTTAATTCCATTGAATTGAATGTGACTTTAAGAGATCAGATATATCAATATTACCTGTTGGGTATTTTAATTTTGGTGTTGCTACTATTACTTTTGCATCCGGTATCTGACTATGCCTTCAATTACGGCTTCAGGTGAGAAAGGACGAAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGTATGTACAGAAATTGTGGGTGCTATTATGGTGTGCGTGTTTCGGTTTCTAGTTGGTTGGTAACTTTCAATCTTACCGTGTGATGAAAATATCTTTGTGGATGGATACTGATTGTCAGGGTTGGAACTGTCTTGTCAACCTGCTTAGAACCTTATTGGGTCATCACTTGTATTAAGCGTTACTCTTTAAATTTTTTTCAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAGGGATGCGAGGTCAGCACTGACATTGGTTCCTGATGTTTTCGTGGACTGACTATCTAGCTTATTCCATTTTTATTCAGTCGTGTTCTTCTGAACTATGTAGGTTATTGTCAGTGGTAAGCTAAGGGCCCAGCGTGCAAAGTCCATGAAATTCAAGGATGGATACATGATTTCATCTGGACAGCCAGTGAAAGAGTACATTGACTCTGCCGTGAGACACGTTCTCCTTAGACAGGTGAGTATCATCTCCGGGAGGAGGATACATGATTTCATCTCAGGCTTTGATGCTGCTCATATTGCAAATGAGTGATTCTGTTTATTAATTGGTGTCTCTGTTTGTTTAATTTACAGGGTGTTCTGGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTCCCCGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAGTTCATTAGGCCCGCGGCTGTGATTCCAACAGCCGAGATTGAGGTTGCAGCAGCTTAAGGAAAGACGAGCAGGCAGTATGGAGGGAGGGATGAACTAGTAGTCTAGTGTTTCTATTACAATATCATTTGCTTCTTTCAGAAAATGGAATTCTAAATTTTGAAGTCGTTTTTGTTGTGTTCTGAGTTATGATTTTGGCATGTTTTTGTTACAAAGTATTCACTCCAACCTTGTTACCTTACTTTACGTTAGTTAGAACCGTAATCTTAATCTACTGTTGTAAAATGAGCCAAAAAAGCCCACATTTATTGTGTTATCTTAAAAAAGCCTACTTTTTATGCCTCTTTCCTCTGTTCTTTTTTAGTTCTATTTGTTAGCAGTGGGCAACTGCTATACTGATCTGGAAGAGGGAGATACACCCTCATTGTACCATTTTGAATATCATTGTGTTCAAGGATTTGGTGTCGAAAACTCTTGTGGTTTGGTCCCATATGAGGAAAAGTTTGGGCTTCTACATGTTCGACTGAAGCCATTTTGAGGAACCCAAATTATAGATCGACTACACATGTTTAATGGCCCACGAAGAGTGACAATCTAGAGGCGCCGACTCTAGATGGCGCCTCAAGATTGTAAATTAAGGAGTCTCAAGAAACCGTACACGACAATTGTCGAGATACTTGGACCAACATGTAGTGAATCTAAGTGAAAAGAAGATGTATTCGAAGTCTTGGGCTTATCTAAGTGACAAAGAATTCGATGCATGAATGGTTAGCCAATTGTTTTTAACACTATTTAATTTTTCTTTTTTTTCACACGGGATCATCCAAATGTGAAAGGGACGTGGATCGTGTCATAGGAGTAGGAGAAGAAACTCCTACCGAGATGACATCAAACACTTTTGAGCAAGTGGAAGAGGATGTTTGATTGGGTTTAAAGGAGTACTATGTCTCACAACCACCACCAGAGATGTCGGCAATATGATATGTTGGAAACACCAACCAGGCAAAACATCGTCACGACTAGGGAAAGAGAAAGAGAATTTCATTTTATTCAGAAATGATTGACGTTGTACAAATAACAATAGATAGCAAATAACTTGACTATAATGTCTTGCATCGTGGCCGAAGGACAAGGACAAATGTGAAATGGAGGTCGAAAAAAAAAAAAAAAAAAAGTAATGACCAACTTAAGCAAATTGCTAACTCATATGATAGTGACAAGGTGCACCTCGTAGATATTTTTTTCACATAGATCTAAAAGGTGAGCATTTTCTTATTTGCTTCAATACTAGAAGATGAGATATTGCACCAACAGGGACTCGCCTTAAATAGCACAGGGATGGAACGAGATTTCTCCCTATTAGGGGCTAGGGACGGGATAATCTCCGTCCCCATCCTCGCCTCGTTCCCCGACCCGTCCTGTCCATTTCTAAGTTTTATATATTTCCAAAGATGAAAAGAATATTATATATTCCATTCTAAATTTCAACCGGTTTTATGTGTTCCAATAAATTTAATGTATTCCTTTCATTTTGTGTAATAAGTTTTTTAACGGTTGCATTAGTTTTTGGGTAAATCCCGAAAAAATAAATGAAAATTTTGGTGGGGACGGAAACAGAGAAGACTTCCTTGTTTCTGCCTCTCTCTCATAGATATCTTTATACATACAGGGTAAGAATGAGGGATTAATCCGACCACGGGGTTGTTAAAGGTATTTTGGGATTAAAAATGATTAAAAAATTGAATTTACATATGAATTAAGTATAAAGTATAGTTATGAGTTTAAATATTATATAACTAAAATTCTATAATGAGAGGGAGATATGCGATGAACCGTTTCGGACGCGAGGGGTACAACTAAAGTGAATTTGAGAAAACATTTTGGAGTCCGGGAGTGGTAGAAAAACAGCGTGCTGAAAAAGCCAAAGGCCGAGAAAGATACCCTATTTCGTGTGCACGTATAATCCGAATTTATTTTTATTTTTATTTTTTTAATTTTCTTAATGTACAAGTTTCTTCCTCTCTCTCTCTCAATTTCGATTTTCTTCGATTTTGCGATTGTTCGACTGCGAAAAAAGTTTCGTGAATAACCCCAATACTGTCTCTTTCAGTTGATTTCCCGGTTTCACTGGCTGAGTCTACTCGACTTTCACTTGATTCTATGGTAACCCCCTATGAACTTCATTTATTTCTGGTGATTTTCTGCTATTTTATCGTTTCCATCACTGTTTATGTGTTTTTCTCTGTAACTCGTTTGGGATTGACTAATTTGTTGGAATTCGGTGCATTACGATTGATAGAGGAGCTCTCTTGGTTGATTTGTTCACCGGAATTTTATGAAATTTTCGGTTTCTGATCAAATTGGATTTGAATTTGTTTATGTTAGTGTAATAAGATTCTTGAATTTGTGCTTATTGCTGTGTAGTTCAAAGTTTGATTTACATGGGGTTGATTGAGGAGTGTTCTTTTTTTCTTTTTTGTTTTTGATGCTCTCTTGATACAGATGTTATGTTAGTTTGAATTCTTTGTTTATTTATTTATTTATTGTCTTCTTTTGGGGGTTTCAGTTTATGTATTTGA

mRNA sequence

ATGGCAACTCAGATGAGCAAGAAGCGAAAGTTTGTGGCCGATGGAGTGTTCTTTGCTGAGCTTAACGAAGTTCTCACCAGAGAGCTTGCAGAGGATGGATACTCTGGAGTTGAGGTTAGGGTCACTCCCATGCGGACTGAGATTATTATCAGGGCTACTCGTACTCAAAATGTTCTTGGTGAGAAAGGACGAAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAGGGATGCGAGGTTATTGTCAGTGGTAAGCTAAGGGCCCAGCGTGCAAAGTCCATGAAATTCAAGGATGGATACATGATTTCATCTGGACAGCCAGTGAAAGAGTACATTGACTCTGCCGTGAGACACGTTCTCCTTAGACAGGGTGTTCTGGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTCCCCGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAGTTCATTAGGCCCGCGGCTGTGATTCCAACAGCCGAGATTGAGAAAAACAGCGTGCTGAAAAAGCCAAAGGCCGAGAAAGATACCCTATTTCGTGTGCACTTGATTTCCCGGTTTCACTGGCTGAGTCTACTCGACTTTCACTTGATTCTATGTTTATGTATTTGA

Coding sequence (CDS)

ATGGCAACTCAGATGAGCAAGAAGCGAAAGTTTGTGGCCGATGGAGTGTTCTTTGCTGAGCTTAACGAAGTTCTCACCAGAGAGCTTGCAGAGGATGGATACTCTGGAGTTGAGGTTAGGGTCACTCCCATGCGGACTGAGATTATTATCAGGGCTACTCGTACTCAAAATGTTCTTGGTGAGAAAGGACGAAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTTCCTGAAAACAGTGTTGAGCTATATGCCGAGAAGGTCAACAACAGAGGACTCTGTGCCATTGCTCAAGCTGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGAGCTAAGGGATGCGAGGTTATTGTCAGTGGTAAGCTAAGGGCCCAGCGTGCAAAGTCCATGAAATTCAAGGATGGATACATGATTTCATCTGGACAGCCAGTGAAAGAGTACATTGACTCTGCCGTGAGACACGTTCTCCTTAGACAGGGTGTTCTGGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCGAAGGGCAAGCAAGGTCCACCGACGCCCCTCCCCGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAGTTCATTAGGCCCGCGGCTGTGATTCCAACAGCCGAGATTGAGAAAAACAGCGTGCTGAAAAAGCCAAAGGCCGAGAAAGATACCCTATTTCGTGTGCACTTGATTTCCCGGTTTCACTGGCTGAGTCTACTCGACTTTCACTTGATTCTATGTTTATGTATTTGA

Protein sequence

MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLKKPKAEKDTLFRVHLISRFHWLSLLDFHLILCLCI
Homology
[Close]
BLAST of Csor.00g158090 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 8.9e-113
Identity = 206/229 (89.96%), Postives = 219/229 (95.63%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTA 230
           VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ +I PA V+  A
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQA 229

[Close]
BLAST of Csor.00g158090 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.4e-111
Identity = 206/237 (86.92%), Postives = 217/237 (91.56%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVL 238
           VLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    PA V   A +  ++ L
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPL 237

[Close]
BLAST of Csor.00g158090 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.7e-109
Identity = 203/234 (86.75%), Postives = 216/234 (92.31%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPA-AVIPTAEIEK 234
           VLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  PA A  P   +++
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQE 234

[Close]
BLAST of Csor.00g158090 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 355.9 bits (912), Expect = 4.0e-97
Identity = 187/238 (78.57%), Postives = 199/238 (83.61%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLK 239
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E        ++PT  I +    K
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--------IVPTTPISEQKAAK 230

[Close]
BLAST of Csor.00g158090 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 9.0e-97
Identity = 187/238 (78.57%), Postives = 199/238 (83.61%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLK 239
           VLGIKVKIML WDP GK GP  PLPD V+I  PK+E        ++PT  I +    K
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--------IVPTTPISEQKGAK 230

[Close]
BLAST of Csor.00g158090 vs. NCBI nr
Match: KAG6593545.1 (40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 530 bits (1364), Expect = 1.95e-189
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLKKP 240
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLKKP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVLKKP 240

Query: 241 KAEKDTLFRVHLISRFHWLSLLDFHLILCLCI 272
           KAEKDTLFRVHLISRFHWLSLLDFHLILCLCI
Sbjct: 241 KAEKDTLFRVHLISRFHWLSLLDFHLILCLCI 272

[Close]
BLAST of Csor.00g158090 vs. NCBI nr
Match: XP_023514160.1 (40S ribosomal protein S3-3 [Cucurbita pepo subsp. pepo] >KAG7025887.1 40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452 bits (1162), Expect = 3.22e-159
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. NCBI nr
Match: XP_023547512.1 (40S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451 bits (1159), Expect = 9.57e-159
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+FIRPAAVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPAAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. NCBI nr
Match: XP_022149321.1 (40S ribosomal protein S3-3 [Momordica charantia])

HSP 1 Score: 450 bits (1158), Expect = 1.31e-158
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRP AVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. NCBI nr
Match: XP_022964488.1 (40S ribosomal protein S3-3 [Cucurbita moschata])

HSP 1 Score: 450 bits (1157), Expect = 1.86e-158
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAV PTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVTPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. ExPASy TrEMBL
Match: A0A6J1D813 (40S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 SV=1)

HSP 1 Score: 450 bits (1158), Expect = 6.35e-159
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRP AVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPVAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. ExPASy TrEMBL
Match: A0A6J1HKZ2 (40S ribosomal protein S3-3 OS=Cucurbita moschata OX=3662 GN=LOC111464498 PE=3 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 9.02e-159
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAV PTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVTPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. ExPASy TrEMBL
Match: A0A6J1GQ60 (40S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE=3 SV=1)

HSP 1 Score: 449 bits (1155), Expect = 1.89e-158
Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+FIRP AVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. ExPASy TrEMBL
Match: A0A6J1KD29 (40S ribosomal protein S3-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494511 PE=3 SV=1)

HSP 1 Score: 448 bits (1152), Expect = 5.21e-158
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIH PKEEEEFIRP AVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHIPKEEEEFIRPVAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. ExPASy TrEMBL
Match: A0A6J1JPM9 (40S ribosomal protein S3-3-like OS=Cucurbita maxima OX=3661 GN=LOC111488704 PE=3 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 2.20e-157
Identity = 229/232 (98.71%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFP NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPVNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIE 232
           VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEE+FIRP AVIPTAEIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEDFIRPVAVIPTAEIE 232

[Close]
BLAST of Csor.00g158090 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 407.9 bits (1047), Expect = 6.3e-114
Identity = 206/229 (89.96%), Postives = 219/229 (95.63%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTA 230
           VLG+KVKIMLDWDPKGKQGP TPLPD+V IHTPKE++ +I PA V+  A
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVTQA 229

[Close]
BLAST of Csor.00g158090 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 401.7 bits (1031), Expect = 4.5e-112
Identity = 206/237 (86.92%), Postives = 217/237 (91.56%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPAAVIPTAEIEKNSVL 238
           VLGIKVK+MLDWDPKG  GP TPLPD+V IH+PKEEE    PA V   A +  ++ L
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPL 237

[Close]
BLAST of Csor.00g158090 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-110
Identity = 203/234 (86.75%), Postives = 216/234 (92.31%), Query Frame = 0 

Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFIRPA-AVIPTAEIEK 234
           VLGIKVKIMLDWDP GK GP TPLPD+V IH PK++  +  PA A  P   +++
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQE 234

The following BLAST results are available for this feature:
BLAST of Csor.00g158090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJA68.9e-11389.9640S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1[more]
Q9M3396.4e-11186.9240S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1[more]
Q9SIP72.7e-10986.7540S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1[more]
P023504.0e-9778.5740S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2[more]
P478359.0e-9778.5740S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1[more]
BLAST of Csor.00g158090 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593545.11.95e-189100.0040S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023514160.13.22e-159100.0040S ribosomal protein S3-3 [Cucurbita pepo subsp. pepo] >KAG7025887.1 40S riboso... [more]
XP_023547512.19.57e-15999.5740S ribosomal protein S3-3-like [Cucurbita pepo subsp. pepo][more]
XP_022149321.11.31e-15899.5740S ribosomal protein S3-3 [Momordica charantia][more]
XP_022964488.11.86e-15899.5740S ribosomal protein S3-3 [Cucurbita moschata][more]
BLAST of Csor.00g158090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D8136.35e-15999.5740S ribosomal protein S3-3 OS=Momordica charantia OX=3673 GN=LOC111017761 PE=3 S... [more]
A0A6J1HKZ29.02e-15999.5740S ribosomal protein S3-3 OS=Cucurbita moschata OX=3662 GN=LOC111464498 PE=3 SV... [more]
A0A6J1GQ601.89e-15899.1440S ribosomal protein S3-3-like OS=Cucurbita moschata OX=3662 GN=LOC111456093 PE... [more]
A0A6J1KD295.21e-15899.1440S ribosomal protein S3-3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149451... [more]
A0A6J1JPM92.20e-15798.7140S ribosomal protein S3-3-like OS=Cucurbita maxima OX=3661 GN=LOC111488704 PE=3... [more]
BLAST of Csor.00g158090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G35530.16.3e-11489.96Ribosomal protein S3 family protein [more]
AT3G53870.14.5e-11286.92Ribosomal protein S3 family protein [more]
AT2G31610.11.9e-11086.75Ribosomal protein S3 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001351Ribosomal protein S3, C-terminalPFAMPF00189Ribosomal_S3_Ccoord: 106..188
e-value: 6.6E-25
score: 87.4
IPR005703Ribosomal protein S3, eukaryotic/archaealTIGRFAMTIGR01008TIGR01008coord: 8..210
e-value: 3.6E-71
score: 236.9
IPR004044K Homology domain, type 2PFAMPF07650KH_2coord: 20..93
e-value: 1.4E-12
score: 47.3
IPR004044K Homology domain, type 2PROSITEPS50823KH_TYPE_2coord: 21..92
score: 11.333969
IPR036419Ribosomal protein S3, C-terminal domain superfamilyGENE3D3.30.1140.32coord: 93..219
e-value: 2.9E-66
score: 223.2
IPR036419Ribosomal protein S3, C-terminal domain superfamilySUPERFAMILY54821Ribosomal protein S3 C-terminal domaincoord: 93..191
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 1..91
e-value: 2.5E-48
score: 164.0
NoneNo IPR availablePANTHERPTHR1176030S/40S RIBOSOMAL PROTEIN S3coord: 3..232
NoneNo IPR availablePANTHERPTHR11760:SF5240S RIBOSOMAL PROTEIN S3-RELATEDcoord: 3..232
NoneNo IPR availableCDDcd0241340S_S3_KHcoord: 15..95
e-value: 2.35005E-51
score: 160.851
IPR018280Ribosomal protein S3, conserved sitePROSITEPS00548RIBOSOMAL_S3coord: 147..183
IPR009019K homology domain superfamily, prokaryotic typeSUPERFAMILY54814Prokaryotic type KH domain (KH-domain type II)coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g158090.m01Csor.00g158090.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005634 nucleus
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding