Csor.00g156770 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g156770
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Glycine cleavage system H protein
Location	Csor_Chr19: 7483261 .. 7485207 (+)
RNA-Seq Expression	Csor.00g156770
Synteny	Csor.00g156770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCTTCTTCTACTGCTAATGCACTCAGACTTTCATCTGCATCTAAAACCCATCTCTCTTCTCCATTCTCTCTCTCCAGATGCTTTTCCACCGGTAATTTTTGCTCTTTTCTTCTTTGCCTGCAAACTGTTTGTGGAAATGCCTCTATGAAGTTGGGTTTTGTTTTTTTTGCTGTTGGATCTCGTGTCCGTTCTGTAGTGTTGTTTGGTTGTTGAGTATGTTTAATTTGTTATCTGGGTATGATAAAAGAGGGGAGTTTTTTGTTCTTAGTTGAATTTAAAGCTGTTGGTTGGGTTTGCAGTTTTGGATGGACTGAAGTATGCTTCTTCTCATGAGTGGGTGAAGCATGAGGGTGAGGTTGCTACTGTTGGCATCACTGACCATGCTCAGGTGCTTTCTCTTTTTTCTGTCACTAAACGTCAATTTGTGTCTAATAGGTTTACGTGGTTAACTCCACTATTTTAATGCTAACATGATATGATTTTACTATGGGGTTGCATTGGAAATGAACCCACAACATATAATTCGAATATACACGATCTGTGTAAGATTCCACATCCGATGGGGAGGAGAACGAAACATTCTTGATAAGGGTGTGGGGCGGTCACAAGGCGCGAGCAAACAGATTCAATCTTTTATTTTAATTACTTTTACATTAATCCATTCCAGAAATTATGCATTTATCTTGATATTCAAACATTGGTTGGAAGCATTTTGTTTGATGCATTTTCACAGGACCATCTAGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAAAGTGTGAAAGCAACAAGTGATATCAACTCCCCAATCTCTGGTGAAATTGTTGAAGTTAACCCACAGCTTAAGGATTCTCCTGGTTTGGTAATTCCAATCCCAAACTCTTTTTGCCAATTCTTTGGACTTTGCATTTGATCGGTTCGATTCTTAGATACTCGTGTTTCATTTTGGTTCATGTGCTTCTTTCAACGGTAGTTAATCTAGTCTTTGTATGTCTGTTATTGTACAACTGGATATTTAACATCGGGGTTAGGTTATTACATTCATAAAATTATATGTTAGGAATCACGAACCTCTACGGTGGTATGATATTGTCCATTTTGAACATAAGCTCTCATGGTTTTGTTTTCGGGCTTCCCCAAAAAGCCTCATACCAATGGAGAAGTATTTCTTACTTATAAACCCATGATCATTCCCTAAATTAGCCAATGTGGGACTCCCTCCCAACAATTCTCAACAATCCTCCCCTCGAACAAAGTACACTATAAAGCTTCCCCTGAGGCCTATGGAGCCCTCGAACAAACAGTCTTCTCTTAATCAAGGCTCGACTCCTTTTTTCTGGAGTCCTCGAACAAAGTACACCCTTTGTTGTACTTTGTTCGACACTTGAGTCACTTTTGACTACACCCCTTCGAGGCTCACAACTTCTTTGTTCGATATTTGAGGATTCTATTGACATGGCTAAATTAAGGAAATGACTCTGATACCATGTTAGGAATCACGAACCTCCACAAGAGTATGATAATGTCCACTTTGAGCATAAACTCTCATGGTTTTGTTTTTGGGCTTTTCCAAAAGGTCTCATACCAATGGAGATGTATTCCTTATTTATAAACCTATGATCATTCCGTTAATTAGTCAATGTGGGACTCGCTCCCAACGATCCTCAACATTATAGAGACTAAAACGAACGGAAAATGGGTAGAAATGGTAATTTTAGCGTAAATGTAGTGTAGTATTGATTTGTTTACTTCCATGTTCATGAAATGAAGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTGGATTCCTTGTTTGGTCCAAAGGAATATACAAAGCATTGTGAGGAAGAAGATGCAGCCCACTAG

mRNA sequence

ATGTGGGCTTCTTCTACTGCTAATGCACTCAGACTTTCATCTGCATCTAAAACCCATCTCTCTTCTCCATTCTCTCTCTCCAGATGCTTTTCCACCGTTTTGGATGGACTGAAGTATGCTTCTTCTCATGAGTGGGTGAAGCATGAGGGTGAGGTTGCTACTGTTGGCATCACTGACCATGCTCAGGACCATCTAGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAAAGTGTGAAAGCAACAAGTGATATCAACTCCCCAATCTCTGGTGAAATTGTTGAAGTTAACCCACAGCTTAAGGATTCTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTGGATTCCTTGTTTGGTCCAAAGGAATATACAAAGCATTGTGAGGAAGAAGATGCAGCCCACTAG

Coding sequence (CDS)

ATGTGGGCTTCTTCTACTGCTAATGCACTCAGACTTTCATCTGCATCTAAAACCCATCTCTCTTCTCCATTCTCTCTCTCCAGATGCTTTTCCACCGTTTTGGATGGACTGAAGTATGCTTCTTCTCATGAGTGGGTGAAGCATGAGGGTGAGGTTGCTACTGTTGGCATCACTGACCATGCTCAGGACCATCTAGGAGAAGTGGTGTTTGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAAAGTGTGAAAGCAACAAGTGATATCAACTCCCCAATCTCTGGTGAAATTGTTGAAGTTAACCCACAGCTTAAGGATTCTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAGCCAAGCAATCCAGCTGAATTGGATTCCTTGTTTGGTCCAAAGGAATATACAAAGCATTGTGAGGAAGAAGATGCAGCCCACTAG

Protein sequence

MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH

Homology

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BLAST of Csor.00g156770 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.2e-70
Identity = 132/161 (81.99%), Postives = 145/161 (90.06%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSSA++ H S    LSRCFS+VLDGLKYA+SHEWVKHEG VAT+GITDH
Sbjct: 5   MWASSTANALRLSSATRPHFS---PLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L ++PGLI
Sbjct: 65  AQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           NSSPYE GWMIKVKPSNP+ELDSL G KEYTK CEEEDAAH
Sbjct: 125 NSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

[Close]

BLAST of Csor.00g156770 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.7e-69
Identity = 130/161 (80.75%), Postives = 145/161 (90.06%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           +WASSTANALRLSSA++ H S    LSRCFS+VLDGLKYA+SHEWVKHEG VAT+GITDH
Sbjct: 5   IWASSTANALRLSSATRPHFS---PLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L ++PGLI
Sbjct: 65  AQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           NSSPYE GWMIKVKPSNP+ELDSL G KEYTK CEEED+AH
Sbjct: 125 NSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

[Close]

BLAST of Csor.00g156770 vs. ExPASy Swiss-Prot
Match: Q9LQL0 (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.1e-69
Identity = 130/162 (80.25%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MWASSTANALRL-SSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITD 60
           MWASSTANAL+L SSASK+HL   FS+SRCFS+VL+GLKYA+SHEWVKHEG VAT+GITD
Sbjct: 5   MWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITD 64

Query: 61  HAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL 120
           HAQDHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++EVN +L +SPGL
Sbjct: 65  HAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGL 124

Query: 121 INSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           INSSPYE GWMIKVKPS+PAEL++L GPKEYTK CEEEDAAH
Sbjct: 125 INSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Csor.00g156770 vs. ExPASy Swiss-Prot
Match: P16048 (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDCSH PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.1e-69
Identity = 127/161 (78.88%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANAL+LSS+S+ HLS  FS+SRCFS VLDGLKYA SHEWVKHEG VAT+GITDH
Sbjct: 5   MWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFV+LPE G SV++GK FGAVESVKATSD+NSPISGE++EVN  L   PGLI
Sbjct: 65  AQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           NSSPYE GWMIK+KP++P EL+SL G KEYTK CEEEDAAH
Sbjct: 125 NSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. ExPASy Swiss-Prot
Match: P25855 (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.8e-68
Identity = 133/162 (82.10%), Postives = 147/162 (90.74%), Query Frame = 0


Query: 1   MWASSTANALRLSSA-SKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITD 60
           MWASSTANAL+LSS+ SK+HL SPFS SRCFSTVL+GLKYA+SHEWVKHEG VAT+GIT 
Sbjct: 5   MWASSTANALKLSSSVSKSHL-SPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITA 64

Query: 61  HAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL 120
           HAQDHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L +SPGL
Sbjct: 65  HAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGL 124

Query: 121 INSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           INSSPYE GWMIKVKPS+PAEL+SL GPKEYTK CEEEDAAH
Sbjct: 125 INSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. NCBI nr
Match: KAG6571837.1 (Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323 bits (829), Expect = 1.47e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH
Sbjct: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH
Sbjct: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161

[Close]

BLAST of Csor.00g156770 vs. NCBI nr
Match: XP_022952526.1 (glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata] >XP_022972003.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita maxima] >XP_023553680.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323 bits (829), Expect = 1.69e-111
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH
Sbjct: 5   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. NCBI nr
Match: XP_038876916.1 (glycine cleavage system H protein, mitochondrial [Benincasa hispida])

HSP 1 Score: 310 bits (795), Expect = 2.59e-106
Identity = 155/161 (96.27%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSS+SKTHLS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVGITDH
Sbjct: 5   MWASSTANALRLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+SPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKESPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTK CEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. NCBI nr
Match: XP_023532627.1 (glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309 bits (792), Expect = 7.44e-106
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSS+SKTHLS PFS+SRCFSTVLDGLKYASSHEWVKHEG VAT+GITDH
Sbjct: 5   MWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTK CEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. NCBI nr
Match: KAG6606235.1 (Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307 bits (787), Expect = 3.75e-105
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSS+SKTHLS PFS+SRCFSTVLDGLKYASSHEWVKHEG VA +GITDH
Sbjct: 1   MWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVAAIGITDH 60

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 61  AQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTK CEEEDAAH
Sbjct: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 161

[Close]

BLAST of Csor.00g156770 vs. ExPASy TrEMBL
Match: A0A6J1I8M1 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE=3 SV=1)

HSP 1 Score: 323 bits (829), Expect = 8.20e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH
Sbjct: 5   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. ExPASy TrEMBL
Match: A0A6J1GKG7 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 PE=3 SV=1)

HSP 1 Score: 323 bits (829), Expect = 8.20e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH
Sbjct: 5   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. ExPASy TrEMBL
Match: A0A6J1ET51 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111437487 PE=3 SV=1)

HSP 1 Score: 306 bits (784), Expect = 5.97e-105
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSS+SKTHLS PFS+SRCFSTVLDGLKYASSHEWVKHEG VAT+GITDH
Sbjct: 5   MWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVN QLKDSPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNQQLKDSPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTK CEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. ExPASy TrEMBL
Match: A0A6J1JYK8 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE=3 SV=1)

HSP 1 Score: 305 bits (781), Expect = 1.71e-104
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANALRLSS+SKT LS PFS+SRCFSTVLDGLKYASSHEWVKHEG VAT+GITDH
Sbjct: 5   MWASSTANALRLSSSSKTLLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTK CEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. ExPASy TrEMBL
Match: A0A0A0LI67 (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=3 SV=1)

HSP 1 Score: 303 bits (776), Expect = 9.91e-104
Identity = 151/161 (93.79%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDH 60
           MWASSTANAL+LSS+SKTHLS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVGITDH
Sbjct: 5   MWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVGITDH 64

Query: 61  AQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLI 120
           AQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+SPGLI
Sbjct: 65  AQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKESPGLI 124

Query: 121 NSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 161
           NSSPYEGGWMIKVKPSNP ELDSL GPKEYTK CEEEDAAH
Sbjct: 125 NSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 261.5 bits (667), Expect = 4.3e-70
Identity = 130/162 (80.25%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MWASSTANALRL-SSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITD 60
           MWASSTANAL+L SSASK+HL   FS+SRCFS+VL+GLKYA+SHEWVKHEG VAT+GITD
Sbjct: 5   MWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATIGITD 64

Query: 61  HAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL 120
           HAQDHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++EVN +L +SPGL
Sbjct: 65  HAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTESPGL 124

Query: 121 INSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           INSSPYE GWMIKVKPS+PAEL++L GPKEYTK CEEEDAAH
Sbjct: 125 INSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Csor.00g156770 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-69
Identity = 133/162 (82.10%), Postives = 147/162 (90.74%), Query Frame = 0


Query: 1   MWASSTANALRLSSA-SKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITD 60
           MWASSTANAL+LSS+ SK+HL SPFS SRCFSTVL+GLKYA+SHEWVKHEG VAT+GIT 
Sbjct: 5   MWASSTANALKLSSSVSKSHL-SPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATIGITA 64

Query: 61  HAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGL 120
           HAQDHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L +SPGL
Sbjct: 65  HAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTESPGL 124

Query: 121 INSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           INSSPYE GWMIKVKPS+PAEL+SL GPKEYTK CEEEDAAH
Sbjct: 125 INSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Csor.00g156770 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 100/160 (62.50%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 2   WASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVGITDHA 61
           WAS  A+ LR+S A +      FS     S VL  LKYA SHEWVK +G  AT GITDHA
Sbjct: 7   WASRVASHLRISVAQR-----GFS-----SVVLKDLKYADSHEWVKIDGNKATFGITDHA 66

Query: 62  QDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDSPGLIN 121
           QDHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VEVN +L +SPGL+N
Sbjct: 67  QDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVN 126

Query: 122 SSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 162
           SSPYE GW+IKV+ S+  E + L    +Y+K CEEEDA H
Sbjct: 127 SSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

The following BLAST results are available for this feature:

BLAST of Csor.00g156770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39732	4.2e-70	81.99	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN...	[more]
P49359	2.7e-69	80.75	Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN...	[more]
Q9LQL0	6.1e-69	80.25	Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P16048	6.1e-69	78.88	Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDC...	[more]
P25855	1.8e-68	82.10	Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Csor.00g156770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571837.1	1.47e-111	100.00	Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperm...	[more]
XP_022952526.1	1.69e-111	100.00	glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]
XP_038876916.1	2.59e-106	96.27	glycine cleavage system H protein, mitochondrial [Benincasa hispida]	[more]
XP_023532627.1	7.44e-106	95.03	glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. p...	[more]
KAG6606235.1	3.75e-105	94.41	Glycine cleavage system H protein, mitochondrial, partial [Cucurbita argyrosperm...	[more]

BLAST of Csor.00g156770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I8M1	8.20e-112	100.00	Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE...	[more]
A0A6J1GKG7	8.20e-112	100.00	Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 ...	[more]
A0A6J1ET51	5.97e-105	94.41	Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111437487 ...	[more]
A0A6J1JYK8	1.71e-104	94.41	Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE...	[more]
A0A0A0LI67	9.91e-104	93.79	Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=...	[more]

BLAST of Csor.00g156770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32470.1	4.3e-70	80.25	Single hybrid motif superfamily protein	[more]
AT2G35370.1	1.3e-69	82.10	glycine decarboxylase complex H	[more]
AT2G35120.1	1.6e-48	62.50	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033753	Glycine cleavage system H-protein/Simiate	PFAM	PF01597	GCV_H	coord: 37..156 e-value: 6.9E-49 score: 164.8
IPR033753	Glycine cleavage system H-protein/Simiate	CDD	cd06848	GCS_H	coord: 39..133 e-value: 1.94312E-51 score: 157.31
None	No IPR available	GENE3D	2.40.50.100		coord: 25..157 e-value: 1.9E-53 score: 181.6
None	No IPR available	PANTHER	PTHR11715:SF32	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..161
IPR017453	Glycine cleavage system H-protein, subgroup	TIGRFAM	TIGR00527	TIGR00527	coord: 35..158 e-value: 8.1E-47 score: 156.5
IPR002930	Glycine cleavage system H-protein	PANTHER	PTHR11715	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..161
IPR002930	Glycine cleavage system H-protein	HAMAP	MF_00272	GcvH	coord: 34..155 score: 36.032028
IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	PROSITE	PS00189	LIPOYL	coord: 77..106
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 52..134 score: 27.883562
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 33..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g156770.m01	Csor.00g156770.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019464	glycine decarboxylation via glycine cleavage system
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0005960	glycine cleavage complex
cellular_component	GO:0005739	mitochondrion