Csor.00g156160 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g156160
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type domain-containing protein
Location	Csor_Chr11: 665058 .. 667040 (-)
RNA-Seq Expression	Csor.00g156160
Synteny	Csor.00g156160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTGAGGACTCTCTCTCTCTTTATCTTCCGACGTAAATCTTCTAATTTTTTTCTTTTAATTTTAATGCTGATGAGTTTTTTTTTTCTTTTTTTCTTTTTTCTCTTTTGTTGATGTTCGACTGTTGATTTTCTTTTTCTGATATGTCGTAACTGTTTTGGTGGGGGGTTTCAGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTATTACTTATAGTTATGTTTTCTTTTGTTGTTAATTGCATATATGTATGGAACGGGATTTATGCTTGTGAGAATTTGTGTTTAATCGATTTGAGTTCACGAGTTATAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCTAGTCTTGGGAGTAGTATCCTGTGTGGTAATGATTCGGTTCCTCACTTTACTGGGAGTAGCAGTAGTAGTAGTTGCCGAAGCAGCTCTAGTGGTTGTCAGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGGTCTTAGCTAGTGTCCAGTTTCTGTGAGTTTATGTTCATCTGGTCTCACCTTTTTTTTTTTTTGTTCGTATGTCTCTTGGGTATTATGGTGGTCTGCTCTGCTTTTCATAGCAATAGATGTGGCATTTGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGATTTGCTTCGTACATGAGTGTGGTTCTTATCTTATGATACATTTGCCAATGTAGAGGACTTATTTCGTACTTGATATGTGAATAGATGAGGTGGTATAGAAATGAATACATGGAATAATGATACAACATTTATTTTTGTCCGCATCTTATTTATTTGTATTTGCATATATTTCATAGAATGCCTGAAACTGTTCTAGTTAGTACTTTCCTCCTTATTCTTGCTGGTTTTATGATACTTAGTGTCGTGATTGACTACTCATATATGGTTTTGTAGCATGTGGCAAGACTCCCAGGCGTATATACACGCTAAAATGAAATGTGGAAATATTTGTAATAACTTCTATGTCACAACTAATTGTTCAATGCTTTTGATGTACATAGCCAGCACCAGCAGTTGAATGTCTGAGATCAGTCAAAGGTAAAAGCTTAACTTGTTTTGCTTTAGAGTTTAGACATGTTGGTTTACTATTGTTTTAATGACTGTTTTAGGATCTGAGGAGTGA

mRNA sequence

ATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCTAGTCTTGGGAGTAGTATCCTGTGTGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGAATGCCTGAAACTGTTCTAGTTAGTACTTTCCTCCTTATTCTTGCTGGTTTTATGATACTTAGTGTCGTGATTGACTACTCATATATGCCAGCACCAGCAGTTGAATGTCTGAGATCAGTCAAAGGATCTGAGGAGTGA

Coding sequence (CDS)

ATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCTAGTCTTGGGAGTAGTATCCTGTGTGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGAATGCCTGAAACTGTTCTAGTTAGTACTTTCCTCCTTATTCTTGCTGGTTTTATGATACTTAGTGTCGTGATTGACTACTCATATATGCCAGCACCAGCAGTTGAATGTCTGAGATCAGTCAAAGGATCTGAGGAGTGA

Protein sequence

MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVVSCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRMPETVLVSTFLLILAGFMILSVVIDYSYMPAPAVECLRSVKGSEE

Homology

[Close]

BLAST of Csor.00g156160 vs. ExPASy Swiss-Prot
Match: P34909 (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.9e-11
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 245 CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYDREHV 296
           CP+C E +D TD +F PC CG+++C FC+  I    E +GRCP CR+ YD E+V
Sbjct: 33  CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYDDENV 86

[Close]

BLAST of Csor.00g156160 vs. ExPASy Swiss-Prot
Match: O95628 (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-10
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 242 PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE 294
           P  CP+C E L+  D +F PC CG+++C FC  RI  +E+G CP CRKPY  +
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPED 63

[Close]

BLAST of Csor.00g156160 vs. ExPASy Swiss-Prot
Match: Q8BT14 (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 1.0e-10
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 242 PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE 294
           P  CP+C E L+  D +F PC CG+++C FC  RI  +E+G CP CRKPY  +
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPED 63

[Close]

BLAST of Csor.00g156160 vs. ExPASy Swiss-Prot
Match: Q09818 (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 245 CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDREHV 296
           CP+C E++D +D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  E+V
Sbjct: 18  CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLYTEENV 69

[Close]

BLAST of Csor.00g156160 vs. ExPASy Swiss-Prot
Match: A2YU42 (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica OX=39946 GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.3e-04
Identity = 21/58 (36.21%), Postives = 28/58 (48.28%), Query Frame = 0


Query: 253 DFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLL 311
           D      LPC C F++C  C    ++  G CPGC+ PY    +D   +V G  PT  L
Sbjct: 158 DERGDDILPCECDFKICADCFADAVKNGGACPGCKDPYKATELD---DVVGARPTLSL 212

[Close]

BLAST of Csor.00g156160 vs. NCBI nr
Match: KAG6587498.1 (hypothetical protein SDJN03_16063, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731 bits (1886), Expect = 6.66e-266
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVVSCVSGSI 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVVSCVSGSI
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVVSCVSGSI 120

Query: 121 TEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGD 180
           TEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGD
Sbjct: 121 TEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGD 180

Query: 181 SSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMP 240
           SSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMP
Sbjct: 181 SSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMP 240

Query: 241 VPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETN 300
           VPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETN
Sbjct: 241 VPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETN 300

Query: 301 VDGGSPTFLLARSYSMISRMPETVLVSTFLLILAGFMILSVVIDYSYMPAPAVECLRSVK 360
           VDGGSPTFLLARSYSMISRMPETVLVSTFLLILAGFMILSVVIDYSYMPAPAVECLRSVK
Sbjct: 301 VDGGSPTFLLARSYSMISRMPETVLVSTFLLILAGFMILSVVIDYSYMPAPAVECLRSVK 360

Query: 361 GSEE 364
           GSEE
Sbjct: 361 GSEE 364

[Close]

BLAST of Csor.00g156160 vs. NCBI nr
Match: KAG7021482.1 (MOT-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622 bits (1605), Expect = 2.19e-223
Identity = 313/344 (90.99%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------- 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 ------------------SCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 344

[Close]

BLAST of Csor.00g156160 vs. NCBI nr
Match: XP_022933340.1 (uncharacterized protein LOC111440610 [Cucurbita moschata])

HSP 1 Score: 616 bits (1588), Expect = 8.50e-221
Identity = 311/344 (90.41%), Postives = 311/344 (90.41%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------- 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 ------------------SCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIVQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGIS ACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISLACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 344

[Close]

BLAST of Csor.00g156160 vs. NCBI nr
Match: XP_023529902.1 (uncharacterized protein LOC111792615 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 611 bits (1575), Expect = 8.13e-219
Identity = 305/344 (88.66%), Postives = 309/344 (89.83%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------- 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 ------------------SCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGS+TEE+EGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSLTEEDEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGN+VSQLDSCGDSRNELGVGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNIVSQLDSCGDSRNELGVGDGDSSIELGKIVQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPN DRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNTDRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           ILEEDGRCPGCRKPYDR+H DNETNVDGGSP FLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKPYDRDHGDNETNVDGGSPMFLLARSYSMISR 344

[Close]

BLAST of Csor.00g156160 vs. NCBI nr
Match: XP_022972777.1 (uncharacterized protein LOC111471280 [Cucurbita maxima])

HSP 1 Score: 607 bits (1564), Expect = 3.85e-217
Identity = 304/344 (88.37%), Postives = 309/344 (89.83%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------- 120
           RLDSVVVKTRKDDDLSSNK+NSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKLNSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 ------------------SCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PS NVVSQLDSCGDSRNELG+GDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSANVVSQLDSCGDSRNELGIGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPN D+HFGYGGISWACGGVMPVP+SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNTDQHFGYGGISWACGGVMPVPSSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           ILEEDGRCPGCRK YDR+HVDNETNVD GSPTFLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKSYDRDHVDNETNVDCGSPTFLLARSYSMISR 344

[Close]

BLAST of Csor.00g156160 vs. ExPASy TrEMBL
Match: A0A6J1F4L8 (uncharacterized protein LOC111440610 OS=Cucurbita moschata OX=3662 GN=LOC111440610 PE=4 SV=1)

HSP 1 Score: 616 bits (1588), Expect = 4.12e-221
Identity = 311/344 (90.41%), Postives = 311/344 (90.41%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------- 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 ------------------SCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIVQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGIS ACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISLACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 344

[Close]

BLAST of Csor.00g156160 vs. ExPASy TrEMBL
Match: A0A6J1I5R9 (uncharacterized protein LOC111471280 OS=Cucurbita maxima OX=3661 GN=LOC111471280 PE=4 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 1.86e-217
Identity = 304/344 (88.37%), Postives = 309/344 (89.83%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------- 120
           RLDSVVVKTRKDDDLSSNK+NSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKLNSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 ------------------SCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PS NVVSQLDSCGDSRNELG+GDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSANVVSQLDSCGDSRNELGIGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPN D+HFGYGGISWACGGVMPVP+SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNTDQHFGYGGISWACGGVMPVPSSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           ILEEDGRCPGCRK YDR+HVDNETNVD GSPTFLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKSYDRDHVDNETNVDCGSPTFLLARSYSMISR 344

[Close]

BLAST of Csor.00g156160 vs. ExPASy TrEMBL
Match: A0A1S3BVJ1 (uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=4 SV=1)

HSP 1 Score: 541 bits (1394), Expect = 1.66e-191
Identity = 277/348 (79.60%), Postives = 291/348 (83.62%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-D 60
           MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWNE D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------ 120
           NRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+S+SPSNSP  LG        
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 -------------------SCVSGSITEEEE---GDDDCLDDWEAIADALAATDKQHDQC 180
                               C SGSITEEEE   GDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSP GNVVSQLDSCGD RNELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319
           CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMISR
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISR 348

[Close]

BLAST of Csor.00g156160 vs. ExPASy TrEMBL
Match: A0A5A7UPV5 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002030 PE=4 SV=1)

HSP 1 Score: 543 bits (1400), Expect = 2.46e-191
Identity = 289/400 (72.25%), Postives = 311/400 (77.75%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-D 60
           MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWNE D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------ 120
           NRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+S+SPSNSP  LG        
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 -------------------SCVSGSITEEEE---GDDDCLDDWEAIADALAATDKQHDQC 180
                               C SGSITEEEE   GDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSP GNVVSQLDSCGD RNELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRMPETVLVST--- 360
           CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMISR      ++    
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISRPFVCTSLAVAGQ 360

Query: 361 -----FLLILAGFMILSVVIDYSYMPAPAVECLRSVKGSE 363
                FL++  G  IL V IDY  +   ++   R +  SE
Sbjct: 361 DTEDEFLMVYIGDWILGVWIDYLSLDTLSLALKRFISMSE 400

[Close]

BLAST of Csor.00g156160 vs. ExPASy TrEMBL
Match: A0A5D3BIS7 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002110 PE=4 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 1.19e-188
Identity = 276/349 (79.08%), Postives = 291/349 (83.38%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-D 60
           MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWNE D
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVV------ 120
           NRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+S+SPSNSP  LG        
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 -------------------SCVSGSITEEEE---GDDDCLDDWEAIADALAATDKQHDQC 180
                               C SGSITEEEE   GDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSP GNVVSQLDSCGD RNELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRM 320
           CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMIS +
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISSL 349

[Close]

BLAST of Csor.00g156160 vs. TAIR 10
Match: AT3G48070.2 (RING/U-box superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 2.8e-64
Identity = 153/342 (44.74%), Postives = 194/342 (56.73%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           M++DSITNAS + AP A D    KK+  R +KLKQSKL +RREQWLS+ A+ NK   E+ 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEM 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVL---------- 120
             +  +   + D       + +    +++N   H H  F ES SNSP  +          
Sbjct: 61  ESNRRIGSEKPDQRDLPRPVENL---DEDNNGTHRHESFIESLSNSPNSILSGMNSIPNF 120

Query: 121 ------GVVSCVSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSESSPSGNVVSQ 180
                 G     SG+ITEEE+ DDD CLDDWEAIADALAA D++H++  E+ P       
Sbjct: 121 SSSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEK--ENPP------- 180

Query: 181 LDSC---GDSRNELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLS 240
            +SC    D +    +G  D  +   K    +R   + +AWRPDD  RPQ LP L KQ S
Sbjct: 181 -ESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQRS 240

Query: 241 LPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILE 300
            P  + HF           V  VP+SCPIC+EDLD TDS+FLPC CGFRLCLFCHK I +
Sbjct: 241 FPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICD 300

Query: 301 EDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRM 321
            DGRCPGCRKPY+R  +  E +V GG  T  LARS SM  R+
Sbjct: 301 GDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRV 319

[Close]

BLAST of Csor.00g156160 vs. TAIR 10
Match: AT3G48070.1 (RING/U-box superfamily protein )

HSP 1 Score: 243.0 bits (619), Expect = 3.6e-64
Identity = 153/341 (44.87%), Postives = 193/341 (56.60%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           M++DSITNAS + AP A D    KK+  R +KLKQSKL +RREQWLS+ A+ NK   E+ 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEM 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVL---------- 120
             +  +   + D       + +    +++N   H H  F ES SNSP  +          
Sbjct: 61  ESNRRIGSEKPDQRDLPRPVENL---DEDNNGTHRHESFIESLSNSPNSILSGMNSIPNF 120

Query: 121 ------GVVSCVSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSESSPSGNVVSQ 180
                 G     SG+ITEEE+ DDD CLDDWEAIADALAA D++H++  E+ P       
Sbjct: 121 SSSSSSGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEK--ENPP------- 180

Query: 181 LDSC---GDSRNELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQSLPTLSKQLS 240
            +SC    D +    +G  D  +   K    +R   + +AWRPDD  RPQ LP L KQ S
Sbjct: 181 -ESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQGLPNLEKQRS 240

Query: 241 LPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILE 300
            P  + HF           V  VP+SCPIC+EDLD TDS+FLPC CGFRLCLFCHK I +
Sbjct: 241 FPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTICD 300

Query: 301 EDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 320
            DGRCPGCRKPY+R  +  E +V GG  T  LARS SM  R
Sbjct: 301 GDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCR 318

[Close]

BLAST of Csor.00g156160 vs. TAIR 10
Match: AT5G62910.1 (RING/U-box superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 8.0e-64
Identity = 154/349 (44.13%), Postives = 199/349 (57.02%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           M+TDSITNAS + AP        KK+  + +K+KQ+KL +RREQWLS+ AV NK+  E+ 
Sbjct: 1   MITDSITNASATSAPRDSG---KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEER 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLGVVSCV---- 120
            ++    +++K    SS+K+   E     N  +HH S F ESPSNS  V G  S      
Sbjct: 61  SVN----RSQKPHHESSDKVRREEDNNGGNNLLHHES-FMESPSNSS-VGGTYSSTNFSG 120

Query: 121 -------------SGSITEEEEGDDD---CLDDWEAIADALAATDK----------QHDQ 180
                        SG+ITEEE  DDD   C+DDWEA+ADALAA ++            +Q
Sbjct: 121 RSSRSSSSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIEKKSRPLESVKEQ 180

Query: 181 CSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSL 240
            S    + NV     S  D+ + +GV D     E  +++ R   + RAWR DD  RPQ L
Sbjct: 181 VSVGQSASNVCD--SSISDASDVVGVEDPKQ--ECLRVSSRKQTSNRAWRLDDDLRPQGL 240

Query: 241 PTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCL 300
           P L+KQLS P  D+ F            + +P+SCPIC+EDLD TDS+FLPC CGFRLCL
Sbjct: 241 PNLAKQLSFPELDKRF----------SSVAIPSSCPICYEDLDLTDSNFLPCPCGFRLCL 300

Query: 301 FCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 320
           FCHK I + DGRCPGCRKPY+R  V  ET++ GG  T  LARS SM  +
Sbjct: 301 FCHKTICDGDGRCPGCRKPYERNMVKAETSIQGGGLTIRLARSSSMFCK 326

[Close]

BLAST of Csor.00g156160 vs. TAIR 10
Match: AT1G74870.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 4.2e-20
Identity = 84/275 (30.55%), Postives = 127/275 (46.18%), Query Frame = 0


Query: 24  KKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-DNRLDSVVVKTRKDDDLSSNKINS 83
           K+K   + KLKQ K+D RR+QW+S+    N    E   RL S++ K     D  + +I+ 
Sbjct: 22  KRKANWFCKLKQWKIDARRKQWISQWKKANVDEEEIGRRLRSLLEKL---TDQKAWRIDY 81

Query: 84  REIGEQNNRSVHHHSDFSESPSN----SPLVLGVVSCVSGSITEEEEG-DDDCLDDWEAI 143
            +  E +   +   S F+ SP++       V G   C S  +TEEEE   DD  D+W+  
Sbjct: 82  DD-DEDDEIDLERTSSFASSPTSVLKRKDSVSGDCFCCSKQMTEEEEEVFDDAYDNWDGF 141

Query: 144 ADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCR 203
            DAL + +      ++++ S  +V++     D   E      D+S  + K  Q A+    
Sbjct: 142 KDALNSFE------NDNNESSRLVTE-----DFEQEEEDLIPDTSQRMNKCKQEAAPG-- 201

Query: 204 AWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDS 263
                      ++   S +    N+++  G G               CPIC E +D TD 
Sbjct: 202 --------NQTTIHRNSNKKKRSNSEKQRGDG------------DEECPICSELMDATDL 259

Query: 264 SFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR 293
            F PC CGFR+CLFCH +I E + RCP CRK Y +
Sbjct: 262 EFEPCTCGFRICLFCHNKISENEARCPACRKDYKK 259

[Close]

BLAST of Csor.00g156160 vs. TAIR 10
Match: AT3G45630.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 244 SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDREHV 296
           +CP+C E++D TD    PC CG+++C++C   I+      + +GRCP CR PYD+E +
Sbjct: 8   TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKEKI 65

The following BLAST results are available for this feature:

BLAST of Csor.00g156160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34909	5.9e-11	50.00	General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisia...	[more]
O95628	1.0e-10	49.06	CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 S...	[more]
Q8BT14	1.0e-10	49.06	CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 ...	[more]
Q09818	1.7e-10	50.00	Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharo...	[more]
A2YU42	5.3e-04	36.21	Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica OX=39946 GN=CSL...	[more]

BLAST of Csor.00g156160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587498.1	6.66e-266	100.00	hypothetical protein SDJN03_16063, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021482.1	2.19e-223	90.99	MOT-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933340.1	8.50e-221	90.41	uncharacterized protein LOC111440610 [Cucurbita moschata]	[more]
XP_023529902.1	8.13e-219	88.66	uncharacterized protein LOC111792615 [Cucurbita pepo subsp. pepo]	[more]
XP_022972777.1	3.85e-217	88.37	uncharacterized protein LOC111471280 [Cucurbita maxima]	[more]

BLAST of Csor.00g156160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4L8	4.12e-221	90.41	uncharacterized protein LOC111440610 OS=Cucurbita moschata OX=3662 GN=LOC1114406...	[more]
A0A6J1I5R9	1.86e-217	88.37	uncharacterized protein LOC111471280 OS=Cucurbita maxima OX=3661 GN=LOC111471280...	[more]
A0A1S3BVJ1	1.66e-191	79.60	uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=...	[more]
A0A5A7UPV5	2.46e-191	72.25	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BIS7	1.19e-188	79.08	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Csor.00g156160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48070.2	2.8e-64	44.74	RING/U-box superfamily protein	[more]
AT3G48070.1	3.6e-64	44.87	RING/U-box superfamily protein	[more]
AT5G62910.1	8.0e-64	44.13	RING/U-box superfamily protein	[more]
AT1G74870.1	4.2e-20	30.55	RING/U-box superfamily protein	[more]
AT3G45630.1	1.6e-11	41.38	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 245..291 e-value: 7.8E-18 score: 64.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12603:SF7	RING/U-BOX SUPERFAMILY PROTEIN	coord: 114..318 coord: 7..109
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 243..295
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 241..302 e-value: 1.5E-17 score: 64.7
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 114..318 coord: 7..109
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 245..287 score: 9.096088
IPR039515	NOT4, modified RING finger, HC subclass (C4C4-type)	CDD	cd16618	mRING-HC-C4C4_CNOT4	coord: 245..288 e-value: 1.51568E-18 score: 76.114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g156160.m01	Csor.00g156160.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity