Csor.00g155190 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g155190
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 11053677 .. 11053988 (+)
RNA-Seq ExpressionCsor.00g155190
SyntenyCsor.00g155190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGAAAGTCATTGAACGCATCCATAGTGAAGTTAGCACTTCTATCCATTGTCTGCATAGTCATTTTAGCACCATCAATAATGGCGGTAGCACCTGATCCATATGATCCTTCGAATATATCTATCTCTGGTTGTGAATCTTTCATTAAAGACTCTGCAGTATGTATTGTAAGCGTGATCAAGGCTCGAACCGGTGATCATCCTTCTTGTTGCAAAGCTATTTCTGATTTGGACACATGTTCTCATTTTCTTTACAAACATATTCCCGATGCTGACATGGATGCAGCTAAGAAACTTTGTGGTATGTAA

mRNA sequence

ATGGCAGGAAAGTCATTGAACGCATCCATAGTGAAGTTAGCACTTCTATCCATTGTCTGCATAGTCATTTTAGCACCATCAATAATGGCGGTAGCACCTGATCCATATGATCCTTCGAATATATCTATCTCTGGTTGTGAATCTTTCATTAAAGACTCTGCAGTATGTATTGTAAGCGTGATCAAGGCTCGAACCGGTGATCATCCTTCTTGTTGCAAAGCTATTTCTGATTTGGACACATGTTCTCATTTTCTTTACAAACATATTCCCGATGCTGACATGGATGCAGCTAAGAAACTTTGTGGTATGTAA

Coding sequence (CDS)

ATGGCAGGAAAGTCATTGAACGCATCCATAGTGAAGTTAGCACTTCTATCCATTGTCTGCATAGTCATTTTAGCACCATCAATAATGGCGGTAGCACCTGATCCATATGATCCTTCGAATATATCTATCTCTGGTTGTGAATCTTTCATTAAAGACTCTGCAGTATGTATTGTAAGCGTGATCAAGGCTCGAACCGGTGATCATCCTTCTTGTTGCAAAGCTATTTCTGATTTGGACACATGTTCTCATTTTCTTTACAAACATATTCCCGATGCTGACATGGATGCAGCTAAGAAACTTTGTGGTATGTAA

Protein sequence

MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM
Homology
BLAST of Csor.00g155190 vs. NCBI nr
Match: KAG6581726.1 (hypothetical protein SDJN03_21728, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204 bits (520), Expect = 2.64e-66
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVSV 60
           MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVSV
Sbjct: 1   MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVSV 60

Query: 61  IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
           IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM
Sbjct: 61  IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103

BLAST of Csor.00g155190 vs. NCBI nr
Match: KAG6581727.1 (hypothetical protein SDJN03_21729, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193 bits (490), Expect = 9.98e-62
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0

Query: 1   MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVSV 60
           MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPY P NISISGCESFI+DSAVCIVSV
Sbjct: 1   MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYIPPNISISGCESFIRDSAVCIVSV 60

Query: 61  IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCG 102
           IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADM AAKKLCG
Sbjct: 61  IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMAAAKKLCG 102

BLAST of Csor.00g155190 vs. NCBI nr
Match: KAG6581728.1 (hypothetical protein SDJN03_21730, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (484), Expect = 8.21e-61
Identity = 96/103 (93.20%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MAGKSLNASIVKLALLSIVCIVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVSV 60
           MAGKSLNASIVKLALLSIVC VILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIV+V
Sbjct: 1   MAGKSLNASIVKLALLSIVCTVILAPSIMAVAPDPYDPSNISISGCESFIKDSAVCIVNV 60

Query: 61  IKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
           IKA+TGDHPSCCKAISDLDTCSHFLYK+IPD D+ AAKKLCGM
Sbjct: 61  IKAQTGDHPSCCKAISDLDTCSHFLYKNIPDDDLAAAKKLCGM 103

BLAST of Csor.00g155190 vs. NCBI nr
Match: TYK10344.1 (hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 8.27e-23
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 0

Query: 2   AGKSLNASIVKLALLSIVCIVILAPSI----MAVAPDPY----DPSNISISGCESFIKDS 61
           A KS +AS ++LAL+ +VCIVILAPS+    MA AP P     D  + S S C  FI ++
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDS-SFSNCAPFILEA 62

Query: 62  AVCIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
            +C+V VIK     HPSCCKAISDL+ C+  +Y+HIP   MD  KK+CG+
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

BLAST of Csor.00g155190 vs. NCBI nr
Match: KAA0050069.1 (hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK10341.1 hypothetical protein E5676_scaffold367G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 1.14e-22
Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MAGKSLNASIVKLALLSIVCIVILAPSIM-----AVAPDPYDPSNISISGCESFIKDSAV 60
           MA +SLN S +KL L+ +VCI ILAPS       A AP P  P N     C  FI ++ +
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
           C+  VIK     HPSCCKAIS L+ C+  +Y+ IP  DMD  KK+C +
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

BLAST of Csor.00g155190 vs. ExPASy TrEMBL
Match: A0A0A0LTD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1)

HSP 1 Score: 102 bits (254), Expect = 5.37e-26
Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 0

Query: 2   AGKSLNASIVKLALLSIVCIVILAPSI----MAVAPDP----YDPSNISISGCESFIKDS 61
           A KS +AS ++LA++ +VCIVILAPS+    MA AP P    +D  + S S C  FI ++
Sbjct: 3   ATKSTSASTIRLAIVFLVCIVILAPSVTARTMAEAPSPVLVLFDEDDSSFSNCAPFILEA 62

Query: 62  AVCIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
            +C+V VIK     HPSCCKAISDL+ C+  +Y+HIPD  MD  KK+CG+
Sbjct: 63  TMCVVDVIKLPVASHPSCCKAISDLNDCAPQIYQHIPD--MDVIKKICGL 110

BLAST of Csor.00g155190 vs. ExPASy TrEMBL
Match: A0A5D3CGL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00200 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.00e-23
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 0

Query: 2   AGKSLNASIVKLALLSIVCIVILAPSI----MAVAPDPY----DPSNISISGCESFIKDS 61
           A KS +AS ++LAL+ +VCIVILAPS+    MA AP P     D  + S S C  FI ++
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDS-SFSNCAPFILEA 62

Query: 62  AVCIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
            +C+V VIK     HPSCCKAISDL+ C+  +Y+HIP   MD  KK+CG+
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYQHIPG--MDVIKKICGL 109

BLAST of Csor.00g155190 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.52e-23
Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MAGKSLNASIVKLALLSIVCIVILAPSIM-----AVAPDPYDPSNISISGCESFIKDSAV 60
           MA +SLN S +KL L+ +VCI ILAPS       A AP P  P N     C  FI ++ +
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
           C+  VIK     HPSCCKAIS L+ C+  +Y+ IP  DMD  KK+C +
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

BLAST of Csor.00g155190 vs. ExPASy TrEMBL
Match: A0A5A7U4A7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00450 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.06e-23
Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 0

Query: 2   AGKSLNASIVKLALLSIVCIVILAPSI----MAVAPDPY----DPSNISISGCESFIKDS 61
           A KS +AS ++LAL+ +VCIVILAPS+    MA AP P     D  + S S C  FI ++
Sbjct: 3   AAKSTSASTIRLALVFLVCIVILAPSVTAHTMAEAPSPLLVLLDQDS-SFSNCAPFILEA 62

Query: 62  AVCIVSVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
            +C+V VIK     HPSCCKAISDL+ C+  +Y HIP   MD  KK+CG+
Sbjct: 63  TMCMVDVIKLPVAPHPSCCKAISDLNDCAPEIYHHIPG--MDVIKKICGL 109

BLAST of Csor.00g155190 vs. ExPASy TrEMBL
Match: A0A5A7U475 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00490 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.66e-20
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 0

Query: 3   GKSLNASIVKLALLSIVCIVILAPSI----MAVAPDPYDPSNISISGCESFIKDSAVCIV 62
            + ++  I+K++L  +V + ILAPS     +A AP P    ++S S C  FI D+ +C+V
Sbjct: 4   NRGMSTFIMKISLTFLVGMAILAPSATATTVAAAPSPLALEDLSFSNCTPFILDATMCVV 63

Query: 63  SVIKARTGDHPSCCKAISDLDTCSHFLYKHIPDADMDAAKKLCGM 103
           SVIK     HPSCCKAISDL+ CS  +Y+HIP   MD  KK+C +
Sbjct: 64  SVIKFPVAPHPSCCKAISDLNDCSPEVYQHIPG--MDVIKKICSL 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6581726.12.64e-66100.00hypothetical protein SDJN03_21728, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6581727.19.98e-6296.08hypothetical protein SDJN03_21729, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6581728.18.21e-6193.20hypothetical protein SDJN03_21730, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK10344.18.27e-2350.00hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa][more]
KAA0050069.11.14e-2246.30hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa] >TYK1034... [more]
Match NameE-valueIdentityDescription
A0A0A0LTD65.37e-2650.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263450 PE=4 SV=1[more]
A0A5D3CGL74.00e-2350.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U9A15.52e-2346.30Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4A78.06e-2350.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U4755.66e-2044.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g155190.m01Csor.00g155190.m01mRNA