Csor.00g155180 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g155180
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 11031249 .. 11032192 (+)
RNA-Seq ExpressionCsor.00g155180
SyntenyCsor.00g155180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCACCCTTATCCAACTCCTTACCTCTGAGACTGTGTTCCATCTCATCCGAGAATACAATGGATCACAGCAAGTAAGCCACAATCCACTGTGTGCTGTTTCCGCCGAGTTCGTGGTTATGCTAGCGGATAAAAGACCCACCCAATTAATTACTGGGTGAATAGGCTAGGCGAGTGGGGAATTAAAGCATATTATCACACGTTTTCTTGTGTTTCTTACTTCCTCCTTATTTGTTCGCTAACTCTCGTTATACGGCTGCTGGACACTAGTACAATTGAATTGCTATTTTCATGTAAGTTATCATTCTCAATAACTAGAAATGATAATATGTCTTCACCCTTATCCAACTCCTTACCTCTGAGACTGTGTTCCATCTCATCCGAGAATACAATGGATCACAGCAAGTAAGCCACAATCCACTGTGTGCTGTTTCCGCCGAGTTCGTGGTTATGCTAGCGGATAAAAGACCCACCCAATTAATTACTGGGTGAATAGGCTAGGCGAGTGGGGAATTAAAGCATATTATCACACGTTTTCTGGTGTTTCTGACTTCCTCATTATTTGTTCGCTAACTGTCGTTATCCGGCTGATGGATCCGCCTACAATCGAATCGCTATTTTCGTGTAAGTTATCGTCTTGCTCTACCTGACCCTATCTTGTTTTTGTTCTGCCCCATCCTATATTTTTTCAAGGCCCAATTTTTCGTCATAATGCTTATTACCCACAAACATCATTCCCAGAGGGTTTTTTCGTCATAATGCGTATTACCCACAAAACATCTTGAAAGAAAGAGGTGATCTGTGTTATTATCATTGCATATTACCCACAAAACCTCTTACCCTGAATCGGAGAAAGAGGTGATCTGTGTTATTATCATTGCATATTACCCACAAAACCTCTTACCCTGAATCAGGAAAATCGACTCCGAATCCAAAGATAG

mRNA sequence

ATGTCTTCACCCTTATCCAACTCCTTACCTCTGAGACTGTGTTCCATCTCATCCGAGAATACAATGGATCACAGCAAAGGGTTTTTTCGTCATAATGCGTATTACCCACAAAACATCTTGAAAGAAAGAGGTGATCTGTGTTATTATCATTGCATATTACCCACAAAACCTCTTACCCTGAATCAGGAAAATCGACTCCGAATCCAAAGATAG

Coding sequence (CDS)

ATGTCTTCACCCTTATCCAACTCCTTACCTCTGAGACTGTGTTCCATCTCATCCGAGAATACAATGGATCACAGCAAAGGGTTTTTTCGTCATAATGCGTATTACCCACAAAACATCTTGAAAGAAAGAGGTGATCTGTGTTATTATCATTGCATATTACCCACAAAACCTCTTACCCTGAATCAGGAAAATCGACTCCGAATCCAAAGATAG

Protein sequence

MSSPLSNSLPLRLCSISSENTMDHSKGFFRHNAYYPQNILKERGDLCYYHCILPTKPLTLNQENRLRIQR
Homology
[Close]
BLAST of Csor.00g155180 vs. NCBI nr
Match: KAG6581725.1 (hypothetical protein SDJN03_21727, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147 bits (372), Expect = 9.47e-45
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MSSPLSNSLPLRLCSISSENTMDHSKGFFRHNAYYPQNILKERGDLCYYHCILPTKPLTL 60
          MSSPLSNSLPLRLCSISSENTMDHSKGFFRHNAYYPQNILKERGDLCYYHCILPTKPLTL
Sbjct: 1  MSSPLSNSLPLRLCSISSENTMDHSKGFFRHNAYYPQNILKERGDLCYYHCILPTKPLTL 60

Query: 61 NQENRLRIQR 70
          NQENRLRIQR
Sbjct: 61 NQENRLRIQR 70

The following BLAST results are available for this feature:
BLAST of Csor.00g155180 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g155180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581725.19.47e-45100.00hypothetical protein SDJN03_21727, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g155180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g155180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g155180.m01Csor.00g155180.m01mRNA