Csor.00g152010 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCTAAAACGGAGCCAACATTTGGAGTTGGCCCGTTGTTTAGACTTGCGTGCTGGGTTTCTCCACGCAATCACCGCTCATTCCCAAGCTCAACCGCCCCGTCGCCTAATTCCAGAGCTTCTCAAAGAAGCATCTCCAAAACCCCAACACTCCGATTTTCTTCTAATGGATTTGCAGCCGAACGAATTCGATCGCCTACTGTTCTTCGAGCACGCTCGTAAGAATGCAGAAGCTGCTTACGCCAATAATCCCCTCGATGCCGATGTGAGTTTTCCGGGTTTTTTTTTTTTGTTAGGTTTGTGGAAGATTGAGTGATGTTCGTTTCTGTGCACAAGTCTTTGGTTAAATGGTTCCAATCGTGCTTGAAGTTTTGTTTTAACCAGCGATTTTGCTGTCTTTAAAACCCCTTTGGTTGTCCATGAGGTCACTAATGCCGACATTCATCCATAGCAGCTGCTATTTCTTGAGTTTTTTGAAGTCATGACCTCAATTTTGTTAGTTGATTACGAGATGGAGGCCCCAGTTTTTGCTTGTTGATTGTTAAAGGTAGTGATAATGAAGAAAAATAACGACTCCTTGTATTAGAATCTCGTTTGCATTTAATGGGGAGCTGAAATTTAAGGATTAAAATGAAATGTTTGAAACGATGGGATAGTTCATCATTTAATGTGCCATTTTTTCTTTAATGGGTGAGCTATATTTGATAATCAAACATGGGCGGACTTTCATGTAGAATTTGACGAGATGGGCAGGAGCTTTGTTAGAGCTATCTCAGTTTCAGAGCGTTCCAGAATCGAAGAAGATGATTTTAGGTATCTTTTTGTTCTATGAGAATTGAGAACGTTTTTGTTTGACTTAGTTGGGTCTTTTTGTGATTCATTTTTTATCTTTCTACATAAGTATTTGCAATGGCAGCTCTTTCTTTGATTTAGTGATGAACATTATCTACTGTGGATTAATTTGTAATGGGGTTGGGACAGATTCAATATCAAAGCTGGAGGAGGCACTGTTAATTAACCCCAAGAAGCATGATGCTCTTTGGTGCATAGGTAATGCTTATACTTCCCATGCATTTTTGAACCCAAACCAGGATGAGGCAAAGGATTATTTTGATAAAGCCTCAGTATACTTTCAACAAGCTGTGAATGAGGTACTTAGCCACGAAAGGCTCGGAATAAACTTACAAATATGCATTTCTTGATGGCTGTTTTAGTTTAACATGGTGATTTTTGGACTCAGGATCCTGGAAATGAGCTTTATCTCAAGTCTTTGGAGGTGACTGCTAAGGTATTTCATTGTGATTTTGGGATCAACATTCATTCGTGCTATTTGATTGTATTTCTATTTTCAAGAATACTAAGCTCTTTTCAATGGCTTTGAAATGAAAGAATCTGTTTGTTTCGTTTTTGCGTTGATAAGAAACAATTAGCTACCACATTAGAGATAGGACAATACTCCTTTTCGACAGCCACCACTAGATTTTTGACTGCTCTCTCTCTCTCTCTCTATTTTTTTTTTTCTTTTTCTTCATAAAATGTAAATCAGTGTAAAAAACTTAGTGGTGGCTACCATGGGTGCCAGCCGGTGGGGGAGTATTTTCCATTGGAGATGGTCTCTCTTGAAATGAAGACAGCACCAATGTTGGGGGAACAAATATCTCAATCAACTAATACACTTGTGGAGTTCCTGTGTTGTTCGATTGTTTTCATAAGTAAACTAGAACTTGATTATTTACTTAGGCCCCCACATAACCATTTTAACAAGAAAACTATAAGCAAAAGTAGTGTTTATAAACTTAACTTTCAAGAACATAAAACCTAAAATAAACTGGTTATCGTACACTGCCTTTGTAGTTAGTATTTTATTTCCATCTTTTGTTATGTTCATGATTCTTATTTTGTGGATTGTGCCTATTAGGCTCCAGAATTGTATTCGGAGATCCACAAGCATGGGTTTCCTCAGCAGGCAACTGGAGCAGCCGAACCATCTACTTCATCCAGTACCAAGGTATATTGCTTATTTCTCAAGAACGATAACATCTCGGGTTACTTTTGGTCCTCATCTTCTATAGACGGGATTTAAGGATGGTTTTGCCACTGCTATGCTCTATGAATGCGTGCCTTTTTATTTTCCTTCAAATTGGTAGCATCATGTTCGAGAAGTGATCTACAACGAAGTTACAAATACATGCTAACAATTTCGTGAATCTTTAGACTCAAGACTCTAAATCTTCGTTTAGACTTGGGCTTCTTCATGTTGCTTATTTGTTTGGATCACTTCTAGCCAAGGTACCTAGATTATAGACACTTAGGAGTAAATACTTAACAACATAGCACATCGATGTTTGGTTCTATACGCTTAAAAGTGCTTTCCGGTCAAGTGGAGGAAAAATCAAAAGCACTCTACAAATGCTTCTTATGTTAATCTCAAACATGATGATAATTATGGGTAGGATGGGAGATCCCACGTCGGATGGAGAGGAGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGACGACGCGTTTTAAAACCTTGAGGGTACGCCTGGAAGGGAAAATCCAAAGAGGACAATATCTGTTAATGGTGGGCTTAGGCTGTTACACGAGCACTCCCAACCAAACATAGCCTTAATTTGATGTGTACCCATCGGTGACGGTGGGTGTTACCATACTGATTCTATCTAGGTTAATGATTGTGAGCAAGAAAAGTTTTCTTTTTCACTACAAAATATTTGTGAACTTCAACTGATAGAACCGCTGTTTATATATGATTCATTGAGCAACATCTTTATTATACTTAGAGATTCACAACTAGTTTCTTACAAGCTCTGAACTTCATGCTCTTTTCTTCTTTCAAGACATCAAAGAAAAAGAAAAGCAGTGATCTGAAGTATGACATATTTGGATGGATAATACTTGCTGTTGGCATAGTTACATGGGTGGGGTTTGCAAAGTCTCACGTGCCGCCCCCGCCCCCTCCACCACCCCGATAA ATGGTTCTAAAACGGAGCCAACATTTGGAGTTGGCCCGTTGTTTAGACTTGCGTGCTGGGTTTCTCCACGCAATCACCGCTCATTCCCAAGCTCAACCGCCCCGTCGCCTAATTCCAGAGCTTCTCAAAGAAGCATCTCCAAAACCCCAACACTCCGATTTTCTTCTAATGGATTTGCAGCCGAACGAATTCGATCGCCTACTGTTCTTCGAGCACGCTCGTAAGAATGCAGAAGCTGCTTACGCCAATAATCCCCTCGATGCCGATAATTTGACGAGATGGGCAGGAGCTTTGTTAGAGCTATCTCAGTTTCAGAGCGTTCCAGAATCGAAGAAGATGATTTTAGATTCAATATCAAAGCTGGAGGAGGCACTGTTAATTAACCCCAAGAAGCATGATGCTCTTTGGTGCATAGGTAATGCTTATACTTCCCATGCATTTTTGAACCCAAACCAGGATGAGGCAAAGGATTATTTTGATAAAGCCTCAGTATACTTTCAACAAGCTGTGAATGAGGATCCTGGAAATGAGCTTTATCTCAAGTCTTTGGAGGTGACTGCTAAGGCTCCAGAATTGTATTCGGAGATCCACAAGCATGGGTTTCCTCAGCAGGCAACTGGAGCAGCCGAACCATCTACTTCATCCAGTACCAAGACATCAAAGAAAAAGAAAAGCAGTGATCTGAAGTATGACATATTTGGATGGATAATACTTGCTGTTGGCATAGTTACATGGGTGGGGTTTGCAAAGTCTCACGTGCCGCCCCCGCCCCCTCCACCACCCCGATAA ATGGTTCTAAAACGGAGCCAACATTTGGAGTTGGCCCGTTGTTTAGACTTGCGTGCTGGGTTTCTCCACGCAATCACCGCTCATTCCCAAGCTCAACCGCCCCGTCGCCTAATTCCAGAGCTTCTCAAAGAAGCATCTCCAAAACCCCAACACTCCGATTTTCTTCTAATGGATTTGCAGCCGAACGAATTCGATCGCCTACTGTTCTTCGAGCACGCTCGTAAGAATGCAGAAGCTGCTTACGCCAATAATCCCCTCGATGCCGATAATTTGACGAGATGGGCAGGAGCTTTGTTAGAGCTATCTCAGTTTCAGAGCGTTCCAGAATCGAAGAAGATGATTTTAGATTCAATATCAAAGCTGGAGGAGGCACTGTTAATTAACCCCAAGAAGCATGATGCTCTTTGGTGCATAGGTAATGCTTATACTTCCCATGCATTTTTGAACCCAAACCAGGATGAGGCAAAGGATTATTTTGATAAAGCCTCAGTATACTTTCAACAAGCTGTGAATGAGGATCCTGGAAATGAGCTTTATCTCAAGTCTTTGGAGGTGACTGCTAAGGCTCCAGAATTGTATTCGGAGATCCACAAGCATGGGTTTCCTCAGCAGGCAACTGGAGCAGCCGAACCATCTACTTCATCCAGTACCAAGACATCAAAGAAAAAGAAAAGCAGTGATCTGAAGTATGACATATTTGGATGGATAATACTTGCTGTTGGCATAGTTACATGGGTGGGGTTTGCAAAGTCTCACGTGCCGCCCCCGCCCCCTCCACCACCCCGATAA MVLKRSQHLELARCLDLRAGFLHAITAHSQAQPPRRLIPELLKEASPKPQHSDFLLMDLQPNEFDRLLFFEHARKNAEAAYANNPLDADNLTRWAGALLELSQFQSVPESKKMILDSISKLEEALLINPKKHDALWCIGNAYTSHAFLNPNQDEAKDYFDKASVYFQQAVNEDPGNELYLKSLEVTAKAPELYSEIHKHGFPQQATGAAEPSTSSSTKTSKKKKSSDLKYDIFGWIILAVGIVTWVGFAKSHVPPPPPPPPR Homology
BLAST of Csor.00g152010 vs. ExPASy Swiss-Prot
Match: P92792 (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum OX=4113 GN=TOM20 PE=1 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 7.6e-85 Identity = 156/206 (75.73%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy Swiss-Prot
Match: P82874 (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana OX=3702 GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.1e-63 Identity = 117/196 (59.69%), Postives = 148/196 (75.51%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy Swiss-Prot
Match: P82873 (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana OX=3702 GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 238.8 bits (608), Expect = 6.9e-62 Identity = 117/208 (56.25%), Postives = 150/208 (72.12%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy Swiss-Prot
Match: P82805 (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana OX=3702 GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 7.4e-56 Identity = 115/198 (58.08%), Postives = 143/198 (72.22%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy Swiss-Prot
Match: A2WYG9 (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica OX=39946 GN=TOM20 PE=2 SV=2) HSP 1 Score: 213.0 bits (541), Expect = 4.1e-54 Identity = 106/194 (54.64%), Postives = 144/194 (74.23%), Query Frame = 0
BLAST of Csor.00g152010 vs. NCBI nr
Match: KAG6581098.1 (Mitochondrial import receptor subunit TOM20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 530 bits (1365), Expect = 6.34e-190 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Csor.00g152010 vs. NCBI nr
Match: XP_022935684.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita moschata] >XP_023526202.1 mitochondrial import receptor subunit TOM20-like [Cucurbita pepo subsp. pepo] >KAG7017828.1 Mitochondrial import receptor subunit TOM20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 419 bits (1078), Expect = 4.63e-147 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Csor.00g152010 vs. NCBI nr
Match: XP_022984139.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita maxima]) HSP 1 Score: 417 bits (1071), Expect = 5.40e-146 Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0
BLAST of Csor.00g152010 vs. NCBI nr
Match: XP_023529318.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 374 bits (960), Expect = 4.10e-129 Identity = 181/203 (89.16%), Postives = 191/203 (94.09%), Query Frame = 0
BLAST of Csor.00g152010 vs. NCBI nr
Match: XP_022989712.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita maxima]) HSP 1 Score: 372 bits (956), Expect = 1.67e-128 Identity = 180/203 (88.67%), Postives = 190/203 (93.60%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy TrEMBL
Match: A0A6J1F645 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111442468 PE=3 SV=1) HSP 1 Score: 419 bits (1078), Expect = 2.24e-147 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy TrEMBL
Match: A0A6J1J9L2 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111482523 PE=3 SV=1) HSP 1 Score: 417 bits (1071), Expect = 2.62e-146 Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy TrEMBL
Match: A0A6J1JGL3 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111486712 PE=3 SV=1) HSP 1 Score: 372 bits (956), Expect = 8.08e-129 Identity = 180/203 (88.67%), Postives = 190/203 (93.60%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy TrEMBL
Match: A0A6J1ERZ1 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111435326 PE=3 SV=1) HSP 1 Score: 367 bits (942), Expect = 1.10e-126 Identity = 178/203 (87.68%), Postives = 189/203 (93.10%), Query Frame = 0
BLAST of Csor.00g152010 vs. ExPASy TrEMBL
Match: A0A1S3BPH5 (mitochondrial import receptor subunit TOM20-like OS=Cucumis melo OX=3656 GN=LOC103491792 PE=3 SV=1) HSP 1 Score: 362 bits (928), Expect = 1.33e-124 Identity = 175/203 (86.21%), Postives = 192/203 (94.58%), Query Frame = 0
BLAST of Csor.00g152010 vs. TAIR 10
Match: AT3G27080.1 (translocase of outer membrane 20 kDa subunit 3 ) HSP 1 Score: 243.8 bits (621), Expect = 1.5e-64 Identity = 117/196 (59.69%), Postives = 148/196 (75.51%), Query Frame = 0
BLAST of Csor.00g152010 vs. TAIR 10
Match: AT1G27390.1 (translocase outer membrane 20-2 ) HSP 1 Score: 238.8 bits (608), Expect = 4.9e-63 Identity = 117/208 (56.25%), Postives = 150/208 (72.12%), Query Frame = 0
BLAST of Csor.00g152010 vs. TAIR 10
Match: AT5G40930.1 (translocase of outer membrane 20-4 ) HSP 1 Score: 218.8 bits (556), Expect = 5.2e-57 Identity = 115/198 (58.08%), Postives = 143/198 (72.22%), Query Frame = 0
BLAST of Csor.00g152010 vs. TAIR 10
Match: AT3G27070.1 (translocase outer membrane 20-1 ) HSP 1 Score: 189.5 bits (480), Expect = 3.4e-48 Identity = 98/186 (52.69%), Postives = 127/186 (68.28%), Query Frame = 0
BLAST of Csor.00g152010 vs. TAIR 10
Match: AT3G27070.2 (translocase outer membrane 20-1 ) HSP 1 Score: 127.1 bits (318), Expect = 2.1e-29 Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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