Csor.00g150610 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGGGTTAGGGTTGAGGAACAAGGAAAGGGTGGAAGGTGGTAAGAGGCTGCTAATCAGTGTAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGCGAAGGAGGAAGATTTGGTGTGTGAAGTTATTCATGCTGCGCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTACTTGGCACTCATGCTTCCAACTTTCTTCTCTATTCTTCTAATTCTGAGGACCCATATGCCTGTAATTTCTGCTACCCTTTCTCTAATATTCTTCTTTTTTGTTGTTTATTTCAATCTTTAAATTTGGGATATGGTTTGGGTTCATGTTTTGTGGCAGCTCTTAATCCAATGGAAACCATAGGATCAAAGCAAGCAAGAAACTTTGTGCTATGCAAGAAGGTAGCCACAGCATCCCCATTGCCAGCTGATCAAAACATGAAAAAGCTAATGACACTAAAGGAAAGCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTTAA ATGAAGGGGTTAGGGTTGAGGAACAAGGAAAGGGTGGAAGGTGGTAAGAGGCTGCTAATCAGTGTAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGCGAAGGAGGAAGATTTGGTGTGTGAAGTTATTCATGCTGCGCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTACTTGGCACTCATGCTTCCAACTTTCTTCTCTATTCTTCTAATTCTGAGGACCCATATGCCTCTCTTAATCCAATGGAAACCATAGGATCAAAGCAAGCAAGAAACTTTGTGCTATGCAAGAAGGTAGCCACAGCATCCCCATTGCCAGCTGATCAAAACATGAAAAAGCTAATGACACTAAAGGAAAGCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTTAA ATGAAGGGGTTAGGGTTGAGGAACAAGGAAAGGGTGGAAGGTGGTAAGAGGCTGCTAATCAGTGTAAATGTTGTGGGAAGTTCAGGTCCATTAAGATTTGTGGCGAAGGAGGAAGATTTGGTGTGTGAAGTTATTCATGCTGCGCTCAAATCTTATGCTCGTCAAGCTCGTCTTCCTCTACTTGGCACTCATGCTTCCAACTTTCTTCTCTATTCTTCTAATTCTGAGGACCCATATGCCTCTCTTAATCCAATGGAAACCATAGGATCAAAGCAAGCAAGAAACTTTGTGCTATGCAAGAAGGTAGCCACAGCATCCCCATTGCCAGCTGATCAAAACATGAAAAAGCTAATGACACTAAAGGAAAGCCATGGCTGGAAGGCTTGGATTAACAAGTCCTTAAGTTTTTAA MKGLGLRNKERVEGGKRLLISVNVVGSSGPLRFVAKEEDLVCEVIHAALKSYARQARLPLLGTHASNFLLYSSNSEDPYASLNPMETIGSKQARNFVLCKKVATASPLPADQNMKKLMTLKESHGWKAWINKSLSF Homology
BLAST of Csor.00g150610 vs. NCBI nr
Match: KAG6581236.1 (hypothetical protein SDJN03_21238, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 272 bits (696), Expect = 4.32e-92 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of Csor.00g150610 vs. NCBI nr
Match: XP_022934727.1 (uncharacterized protein LOC111441823 [Cucurbita moschata]) HSP 1 Score: 271 bits (692), Expect = 1.76e-91 Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of Csor.00g150610 vs. NCBI nr
Match: XP_023529063.1 (uncharacterized protein LOC111791812 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261 bits (668), Expect = 1.48e-87 Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0
BLAST of Csor.00g150610 vs. NCBI nr
Match: XP_022983917.1 (uncharacterized protein LOC111482395 [Cucurbita maxima]) HSP 1 Score: 259 bits (662), Expect = 1.22e-86 Identity = 129/136 (94.85%), Postives = 131/136 (96.32%), Query Frame = 0
BLAST of Csor.00g150610 vs. NCBI nr
Match: XP_022143447.1 (uncharacterized protein LOC111013321 [Momordica charantia]) HSP 1 Score: 184 bits (466), Expect = 8.03e-57 Identity = 94/126 (74.60%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of Csor.00g150610 vs. ExPASy TrEMBL
Match: A0A6J1F3L9 (uncharacterized protein LOC111441823 OS=Cucurbita moschata OX=3662 GN=LOC111441823 PE=4 SV=1) HSP 1 Score: 271 bits (692), Expect = 8.53e-92 Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of Csor.00g150610 vs. ExPASy TrEMBL
Match: A0A6J1J0M6 (uncharacterized protein LOC111482395 OS=Cucurbita maxima OX=3661 GN=LOC111482395 PE=4 SV=1) HSP 1 Score: 259 bits (662), Expect = 5.90e-87 Identity = 129/136 (94.85%), Postives = 131/136 (96.32%), Query Frame = 0
BLAST of Csor.00g150610 vs. ExPASy TrEMBL
Match: A0A6J1CQV0 (uncharacterized protein LOC111013321 OS=Momordica charantia OX=3673 GN=LOC111013321 PE=4 SV=1) HSP 1 Score: 184 bits (466), Expect = 3.89e-57 Identity = 94/126 (74.60%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of Csor.00g150610 vs. ExPASy TrEMBL
Match: A0A0A0LBQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190360 PE=4 SV=1) HSP 1 Score: 167 bits (422), Expect = 1.02e-50 Identity = 91/138 (65.94%), Postives = 101/138 (73.19%), Query Frame = 0
BLAST of Csor.00g150610 vs. ExPASy TrEMBL
Match: A0A1S2YDA3 (uncharacterized protein LOC101504281 OS=Cicer arietinum OX=3827 GN=LOC101504281 PE=4 SV=1) HSP 1 Score: 129 bits (323), Expect = 1.59e-35 Identity = 65/127 (51.18%), Postives = 88/127 (69.29%), Query Frame = 0
BLAST of Csor.00g150610 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.4 bits (246), Expect = 2.4e-21 Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of Csor.00g150610 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 97.4 bits (241), Expect = 9.2e-21 Identity = 56/132 (42.42%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of Csor.00g150610 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 0
BLAST of Csor.00g150610 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.4e-05 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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