Csor.00g145320 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g145320
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionWound-responsive family protein
LocationCsor_Chr16: 4538271 .. 4538543 (-)
RNA-Seq ExpressionCsor.00g145320
SyntenyCsor.00g145320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCGGAGTGCGGCTTGCAGGGCCTGGTTCGTGGCGGCAAGCATCGGCGCCGTGGAGGCCATGAAGGATCAAGGGGTTTGCCGTTGGAACAACCTCATCAAATCCCTGCACCAACACGGGAATAGCAAGCTCAGATCTTACTACCAAGCTAAGAAGCTCTCTGCTTCCTCTTCTTCCGCCATTGCCAACCAGATCAACAAGTCTAGAGAGGAGAAGATGAGGAAAGTCATGGATTTGGGGTGTTTGGGTCCCAGTACCATCAGATTCTAG

mRNA sequence

ATGTCTCGGAGTGCGGCTTGCAGGGCCTGGTTCGTGGCGGCAAGCATCGGCGCCGTGGAGGCCATGAAGGATCAAGGGGTTTGCCGTTGGAACAACCTCATCAAATCCCTGCACCAACACGGGAATAGCAAGCTCAGATCTTACTACCAAGCTAAGAAGCTCTCTGCTTCCTCTTCTTCCGCCATTGCCAACCAGATCAACAAGTCTAGAGAGGAGAAGATGAGGAAAGTCATGGATTTGGGGTGTTTGGGTCCCAGTACCATCAGATTCTAG

Coding sequence (CDS)

ATGTCTCGGAGTGCGGCTTGCAGGGCCTGGTTCGTGGCGGCAAGCATCGGCGCCGTGGAGGCCATGAAGGATCAAGGGGTTTGCCGTTGGAACAACCTCATCAAATCCCTGCACCAACACGGGAATAGCAAGCTCAGATCTTACTACCAAGCTAAGAAGCTCTCTGCTTCCTCTTCTTCCGCCATTGCCAACCAGATCAACAAGTCTAGAGAGGAGAAGATGAGGAAAGTCATGGATTTGGGGTGTTTGGGTCCCAGTACCATCAGATTCTAG

Protein sequence

MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAIANQINKSREEKMRKVMDLGCLGPSTIRF
Homology
BLAST of Csor.00g145320 vs. NCBI nr
Match: XP_022929392.1 (uncharacterized protein LOC111435977 [Cucurbita moschata] >KAG6577397.1 hypothetical protein SDJN03_24971, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015474.1 hypothetical protein SDJN02_23110, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177 bits (449), Expect = 6.99e-56
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AIANQINKSREEKMRKVMDLGCLGPSTIRF
Sbjct: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90

BLAST of Csor.00g145320 vs. NCBI nr
Match: XP_022985278.1 (uncharacterized protein LOC111483317 [Cucurbita maxima])

HSP 1 Score: 174 bits (441), Expect = 1.16e-54
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHG+SKLRSYYQAKKLSASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGSSKLRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AI+NQINKSREEKMRKVMDLGCLGPSTIRF
Sbjct: 61 AISNQINKSREEKMRKVMDLGCLGPSTIRF 90

BLAST of Csor.00g145320 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida])

HSP 1 Score: 163 bits (413), Expect = 2.13e-49
Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 0

Query: 1   MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
           MS+SAACRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +K RSYYQAKKLSASSSS
Sbjct: 74  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKFRSYYQAKKLSASSSS 133

Query: 61  AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
           AIANQINKSREEKMRKVMDL CLGPSTIRF
Sbjct: 134 AIANQINKSREEKMRKVMDLSCLGPSTIRF 163

BLAST of Csor.00g145320 vs. NCBI nr
Match: KAA0046885.1 (putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative wound-induced protein [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (402), Expect = 1.04e-48
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSA CRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +K+RSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AIA QINKSRE+KMRKVMDL CLGPSTIRF
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPSTIRF 90

BLAST of Csor.00g145320 vs. NCBI nr
Match: KAG7031383.1 (hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157 bits (396), Expect = 8.54e-48
Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MS+SAACRAWFVAASIGAVEA KDQGVCRWNN+IKSL QHG +KLRSYYQAKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEASKDQGVCRWNNVIKSLQQHGKTKLRSYYQAKKISASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AI NQ+ +SREEKMRKVMDL CLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A6J1EMN4 (uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC111435977 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 3.39e-56
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AIANQINKSREEKMRKVMDLGCLGPSTIRF
Sbjct: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90

BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A6J1JD67 (uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 5.63e-55
Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHG+SKLRSYYQAKKLSASSSS
Sbjct: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGSSKLRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AI+NQINKSREEKMRKVMDLGCLGPSTIRF
Sbjct: 61 AISNQINKSREEKMRKVMDLGCLGPSTIRF 90

BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 2.49e-49
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSA CRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +K+RSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AIANQI KSRE+KMRKVMDL CLGPSTIRF
Sbjct: 61 AIANQIKKSREDKMRKVMDLSCLGPSTIRF 90

BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A5A7TZR6 (Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00840 PE=4 SV=1)

HSP 1 Score: 159 bits (402), Expect = 5.02e-49
Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MSRSA CRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +K+RSYYQAKKLSASSSS
Sbjct: 1  MSRSAVCRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKVRSYYQAKKLSASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AIA QINKSRE+KMRKVMDL CLGPSTIRF
Sbjct: 61 AIAYQINKSREDKMRKVMDLSCLGPSTIRF 90

BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1)

HSP 1 Score: 155 bits (393), Expect = 1.19e-47
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0

Query: 1  MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSS 60
          MS+SAACRAWFVAASIGAVEA+KDQGVCRWNN+IKSL QHG +KLRSYY AKK+SASSSS
Sbjct: 1  MSKSAACRAWFVAASIGAVEALKDQGVCRWNNVIKSLQQHGKTKLRSYYPAKKISASSSS 60

Query: 61 AIANQINKSREEKMRKVMDLGCLGPSTIRF 90
          AI NQ+ +SREEKMRKVMDL CLGPSTIRF
Sbjct: 61 AIGNQMKRSREEKMRKVMDLSCLGPSTIRF 90

BLAST of Csor.00g145320 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 0

Query: 4  SAACRAWFVAASIGAVEAMKDQ-GVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAI 63
          S+A + W VAASIGAVEA+KDQ GVCRWN +I+S +Q+  + LRS  QAKKL  SSSS  
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKL--SSSSID 61

Query: 64 ANQINKSREEKMRKVMDLGCLGPS 87
               K  EE +R VM L C GPS
Sbjct: 62 YTNKTKQAEESLRTVMYLSCWGPS 83

BLAST of Csor.00g145320 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 75.5 bits (184), Expect = 2.5e-14
Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0

Query: 4  SAACRAWFVAASIGAVEAMKDQ-GVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAI 63
          S+  +AW VA SIGAVEA+KDQ G+CRWN +++S++QH  + +RS  Q K+ S+SS SA 
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 64 ANQINKSR-----EEKMRKVMDLGCLGPS 87
               +S      EE +R VM L C GP+
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCWGPN 90

BLAST of Csor.00g145320 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 63.9 bits (154), Expect = 7.4e-11
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0

Query: 9  AWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAIANQINK 68
          +W VA +I AVE +KDQGV RWN L + LH+   +++R+     + S  +SS+ A  I  
Sbjct: 8  SWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRS 67

Query: 69 SR------EEKMRKVMDLGCLGPSTIRF 91
                  E    K M L C GP+T+RF
Sbjct: 68 KPLSTTPFETSFEKAMGLSCFGPTTVRF 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022929392.16.99e-56100.00uncharacterized protein LOC111435977 [Cucurbita moschata] >KAG6577397.1 hypothet... [more]
XP_022985278.11.16e-5497.78uncharacterized protein LOC111483317 [Cucurbita maxima][more]
XP_038877273.12.13e-4991.11uncharacterized protein LOC120069557 [Benincasa hispida][more]
KAA0046885.11.04e-4888.89putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative w... [more]
KAG7031383.18.54e-4886.67hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A6J1EMN43.39e-56100.00uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC1114359... [more]
A0A6J1JD675.63e-5597.78uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317... [more]
A0A0A0L5942.49e-4988.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1[more]
A0A5A7TZR65.02e-4988.89Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1JZW31.19e-4785.56uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778... [more]
Match NameE-valueIdentityDescription
AT4G10265.11.0e-1557.14Wound-responsive family protein [more]
AT4G10270.12.5e-1447.19Wound-responsive family protein [more]
AT4G33560.17.4e-1138.64Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 12..85
e-value: 4.0E-25
score: 88.6
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 4..90
NoneNo IPR availablePANTHERPTHR33090:SF69WOUND-RESPONSIVE FAMILY PROTEINcoord: 4..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g145320.m01Csor.00g145320.m01mRNA