Csor.00g145320 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGGAGTGCGGCTTGCAGGGCCTGGTTCGTGGCGGCAAGCATCGGCGCCGTGGAGGCCATGAAGGATCAAGGGGTTTGCCGTTGGAACAACCTCATCAAATCCCTGCACCAACACGGGAATAGCAAGCTCAGATCTTACTACCAAGCTAAGAAGCTCTCTGCTTCCTCTTCTTCCGCCATTGCCAACCAGATCAACAAGTCTAGAGAGGAGAAGATGAGGAAAGTCATGGATTTGGGGTGTTTGGGTCCCAGTACCATCAGATTCTAG ATGTCTCGGAGTGCGGCTTGCAGGGCCTGGTTCGTGGCGGCAAGCATCGGCGCCGTGGAGGCCATGAAGGATCAAGGGGTTTGCCGTTGGAACAACCTCATCAAATCCCTGCACCAACACGGGAATAGCAAGCTCAGATCTTACTACCAAGCTAAGAAGCTCTCTGCTTCCTCTTCTTCCGCCATTGCCAACCAGATCAACAAGTCTAGAGAGGAGAAGATGAGGAAAGTCATGGATTTGGGGTGTTTGGGTCCCAGTACCATCAGATTCTAG ATGTCTCGGAGTGCGGCTTGCAGGGCCTGGTTCGTGGCGGCAAGCATCGGCGCCGTGGAGGCCATGAAGGATCAAGGGGTTTGCCGTTGGAACAACCTCATCAAATCCCTGCACCAACACGGGAATAGCAAGCTCAGATCTTACTACCAAGCTAAGAAGCTCTCTGCTTCCTCTTCTTCCGCCATTGCCAACCAGATCAACAAGTCTAGAGAGGAGAAGATGAGGAAAGTCATGGATTTGGGGTGTTTGGGTCCCAGTACCATCAGATTCTAG MSRSAACRAWFVAASIGAVEAMKDQGVCRWNNLIKSLHQHGNSKLRSYYQAKKLSASSSSAIANQINKSREEKMRKVMDLGCLGPSTIRF Homology
BLAST of Csor.00g145320 vs. NCBI nr
Match: XP_022929392.1 (uncharacterized protein LOC111435977 [Cucurbita moschata] >KAG6577397.1 hypothetical protein SDJN03_24971, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015474.1 hypothetical protein SDJN02_23110, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 177 bits (449), Expect = 6.99e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g145320 vs. NCBI nr
Match: XP_022985278.1 (uncharacterized protein LOC111483317 [Cucurbita maxima]) HSP 1 Score: 174 bits (441), Expect = 1.16e-54 Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g145320 vs. NCBI nr
Match: XP_038877273.1 (uncharacterized protein LOC120069557 [Benincasa hispida]) HSP 1 Score: 163 bits (413), Expect = 2.13e-49 Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of Csor.00g145320 vs. NCBI nr
Match: KAA0046885.1 (putative wound-induced protein [Cucumis melo var. makuwa] >TYK03263.1 putative wound-induced protein [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (402), Expect = 1.04e-48 Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of Csor.00g145320 vs. NCBI nr
Match: KAG7031383.1 (hypothetical protein SDJN02_05423, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157 bits (396), Expect = 8.54e-48 Identity = 78/90 (86.67%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A6J1EMN4 (uncharacterized protein LOC111435977 OS=Cucurbita moschata OX=3662 GN=LOC111435977 PE=4 SV=1) HSP 1 Score: 177 bits (449), Expect = 3.39e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A6J1JD67 (uncharacterized protein LOC111483317 OS=Cucurbita maxima OX=3661 GN=LOC111483317 PE=4 SV=1) HSP 1 Score: 174 bits (441), Expect = 5.63e-55 Identity = 88/90 (97.78%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A0A0L594 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099650 PE=4 SV=1) HSP 1 Score: 160 bits (404), Expect = 2.49e-49 Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A5A7TZR6 (Putative wound-induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00840 PE=4 SV=1) HSP 1 Score: 159 bits (402), Expect = 5.02e-49 Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of Csor.00g145320 vs. ExPASy TrEMBL
Match: A0A6J1JZW3 (uncharacterized protein LOC111489778 OS=Cucurbita maxima OX=3661 GN=LOC111489778 PE=4 SV=1) HSP 1 Score: 155 bits (393), Expect = 1.19e-47 Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Csor.00g145320 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15 Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of Csor.00g145320 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 75.5 bits (184), Expect = 2.5e-14 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Csor.00g145320 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein ) HSP 1 Score: 63.9 bits (154), Expect = 7.4e-11 Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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