Csor.00g145010 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATGGAAGAAGCTCAAAGATAATTCACAAGAAAGGGTTAGCAGGGTCAGGACGTAAAGCTCTAAATGACATTACAAACAAATCAACCTGTCGCCAGGACGCTCCATTGAGGAAGCAAGAAAGAGCAAAGGAAGAAATTGATGTAGGTGTGAAAAGATTTTTGCATGATCATGATAAATGCGTTGATGCACGAAAAGCCACTATGTCTGCCTTTTTACTTGGATCTTGTTCTTCCTGGACATGGTAAGCTGTTGAATGTCGAGGATAAAATTGCTTGCAATTTGATAATAACTCAAGTCTGCTAACGATACTGCTTTTGTGAAATCTTCTGTGATTACTTTTATTACTATGTTCATTAAGAAAGTCCTGAATGGTAAAATATCTCCTGTAATTTATCATTTTACCGTCACTCTTTACATGAGATTTAAAGCCCATATTTTTATATGCAGGACTCATTGTCCAAAGTTGGATGTCATACGTCCGATCAAGCAAAGAGTAATTCTTCTTAAACTACTTTCAATTTATTATTCTCTACATAATTTTTTTTATTCTTTGTCCTGTTGTTACCATAAAAAATGACATACGTATTCATCACTATAGATTGACTCAATGCCTATAGGAGGAAATTGTAAAATTCAAACGTGTTTTAGTCATAAATTCCAAGTTACTTCGAATACTAATGTGTGGGATTTTCTTGAATCTATCCTAAATACTATGGTTTGAGGAGATGATCTAAGGTAGATGTGTGTAGGCTGAGAGGATTCATGGGTTATATAAAGACATTGATATCGATCAATTGATATAATATGATTTTTTTCTTGATGTGTTTCTTCTCTTCCTTTTAATTAAACATTTACTTTTTTCTTGAGAAAAAGTGTCTTAAACTCAAGAATATTCTCCTATTTTCACTCATTAAGAATGAAAGTATTGCCATTAGCTGGGAATATGAGAAGTTTTTAATTTTGATAAATTGATAATACACAAATGAGTAGAAACTTGAAGTATATTTCTAGTCACTTTGTTTCAATCTTTATGTCAATTTGTCCTTATACTTCAAAAGTTTTGTTACTGTCCTCTTAATAATGTTTTTAATCCTGAGTCATGAATCTCTTTATGCTATAGATTGATGTTGATGCCCCACAATGTTACCCTGACCCGGATGAATTGTTCATTCCTGAGCTTCCTAATTGGTCATAA ATGGAAAATGGAAGAAGCTCAAAGATAATTCACAAGAAAGGGTTAGCAGGGTCAGGACGTAAAGCTCTAAATGACATTACAAACAAATCAACCTGTCGCCAGGACGCTCCATTGAGGAAGCAAGAAAGAGCAAAGGAAGAAATTGATGTAGGTGTGAAAAGATTTTTGCATGATCATGATAAATGCGTTGATGCACGAAAAGCCACTATGTCTGCCTTTTTACTTGGATCTTGTTCTTCCTGGACATGGACTCATTGTCCAAAGTTGGATGTCATACGTCCGATCAAGCAAAGAATTGATGTTGATGCCCCACAATGTTACCCTGACCCGGATGAATTGTTCATTCCTGAGCTTCCTAATTGGTCATAA ATGGAAAATGGAAGAAGCTCAAAGATAATTCACAAGAAAGGGTTAGCAGGGTCAGGACGTAAAGCTCTAAATGACATTACAAACAAATCAACCTGTCGCCAGGACGCTCCATTGAGGAAGCAAGAAAGAGCAAAGGAAGAAATTGATGTAGGTGTGAAAAGATTTTTGCATGATCATGATAAATGCGTTGATGCACGAAAAGCCACTATGTCTGCCTTTTTACTTGGATCTTGTTCTTCCTGGACATGGACTCATTGTCCAAAGTTGGATGTCATACGTCCGATCAAGCAAAGAATTGATGTTGATGCCCCACAATGTTACCCTGACCCGGATGAATTGTTCATTCCTGAGCTTCCTAATTGGTCATAA MENGRSSKIIHKKGLAGSGRKALNDITNKSTCRQDAPLRKQERAKEEIDVGVKRFLHDHDKCVDARKATMSAFLLGSCSSWTWTHCPKLDVIRPIKQRIDVDAPQCYPDPDELFIPELPNWS Homology
BLAST of Csor.00g145010 vs. ExPASy Swiss-Prot
Match: Q9LJG6 (Protein PATRONUS 1 OS=Arabidopsis thaliana OX=3702 GN=PANS1 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06 Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 0
BLAST of Csor.00g145010 vs. ExPASy Swiss-Prot
Match: Q94CK6 (Protein PATRONUS 2 OS=Arabidopsis thaliana OX=3702 GN=PANS2 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.1e-04 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Csor.00g145010 vs. NCBI nr
Match: KAG6586071.1 (Protein PATRONUS 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 260 bits (665), Expect = 8.12e-88 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g145010 vs. NCBI nr
Match: KAG7022111.1 (Protein PATRONUS 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189 bits (479), Expect = 1.39e-58 Identity = 98/124 (79.03%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. NCBI nr
Match: KAG6588212.1 (Protein PATRONUS 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187 bits (476), Expect = 3.97e-58 Identity = 97/124 (78.23%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. NCBI nr
Match: XP_022973829.1 (protein PATRONUS 1-like [Cucurbita maxima] >XP_022973838.1 protein PATRONUS 1-like [Cucurbita maxima]) HSP 1 Score: 186 bits (471), Expect = 2.29e-57 Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. NCBI nr
Match: XP_022928586.1 (protein PATRONUS 1-like isoform X2 [Cucurbita moschata] >XP_022928587.1 protein PATRONUS 1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 185 bits (470), Expect = 3.24e-57 Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. ExPASy TrEMBL
Match: A0A6J1IFS7 (protein PATRONUS 1-like OS=Cucurbita maxima OX=3661 GN=LOC111472376 PE=4 SV=1) HSP 1 Score: 186 bits (471), Expect = 1.11e-57 Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. ExPASy TrEMBL
Match: A0A6J1EKC8 (protein PATRONUS 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435410 PE=4 SV=1) HSP 1 Score: 185 bits (470), Expect = 1.57e-57 Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. ExPASy TrEMBL
Match: A0A6J1ES26 (protein PATRONUS 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435410 PE=4 SV=1) HSP 1 Score: 185 bits (470), Expect = 6.76e-57 Identity = 95/124 (76.61%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of Csor.00g145010 vs. ExPASy TrEMBL
Match: A0A6J1D5A5 (protein PATRONUS 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017434 PE=4 SV=1) HSP 1 Score: 120 bits (302), Expect = 5.00e-32 Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of Csor.00g145010 vs. ExPASy TrEMBL
Match: A0A6J1D672 (protein PATRONUS 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017434 PE=4 SV=1) HSP 1 Score: 120 bits (302), Expect = 5.14e-32 Identity = 64/121 (52.89%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of Csor.00g145010 vs. TAIR 10
Match: AT3G14190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12360.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 37/116 (31.90%), Postives = 55/116 (47.41%), Query Frame = 0
BLAST of Csor.00g145010 vs. TAIR 10
Match: AT5G12360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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