Csor.00g144020 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g144020
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
Location	Csor_Chr03: 9219400 .. 9221095 (-)
RNA-Seq Expression	Csor.00g144020
Synteny	Csor.00g144020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTATGCATCTTCATCATCGCCTTCCATCTCCATCGCTATCATTTTCGGGAGCTTCACCGCCGGTTTACAGATCATCAATCTTCGCATCATCTCGCTTCTCTCCGCCATCAGTTTCATTTCCGTCCCATAAGTTAACCGATTTCACCAACTGCCTTCTTCATCTACCTCCAAAATCTCTGAGTTTCGCGCTCTCTTGGACTCTTGCGCTCGGAGTAGCTCTCTCAGGTAATCATTCTTGCAAATTATCGTCGGTTAGATGAAGAAAGAAAAAAGGAATGTCAAATTATCGTCGGTTAGATGAAGAAAGAAAAAAGGAATGTTAAATTCTGTCTGAATTGTTTCGAGCTTGAATGTTTAGGTTATATAATTGGTTTTAGATACTCGCTTGTTTATTGAAGTGATTGGCTCTGCTCTATCATAGAAACTTAAGAATTTTATGAAATGCTAACAGTAATAAGTGAGTGTACCTTGTAGGAGTTGGATTTGCTGACGCCAAAGTTGGGGTTAACAAACCAGAATTACTTCCCAAGGAGTTCACCTCTGTCATTGATGTCGCTGGCTTTCTATCTGATGGCCAGGTGTGGTTGCTTCGCCTCGTTCCTTTTCTTTTTCTTTTTTTTCCTTTTGTTGCGTTCCTTGATGTAATTTAGGGTATTTGATCATGATCAAGTTGCCATTGCTGGTTCTGATTTTCTATGAACAGGAATTTAGGCTCAAACAAGAAATTGCTGACATTGAGAAGGAAACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGTGACACCTGGTATGTTCTATGTTTTATCTTCAGCAGATCATTGAATTAATGTCACATTTAATGGCGAGGACTTTATTATTAAAATTTCAACATACATTCACTGAATCTTACTAGAACATTGTATATGTGATTTATTGACACTTCATAACTTCGAAAGTTTCTCACACACACGCATGTCAAGTTTATCAAGTTAGATAGATGATCTCTAATCTAATCGGCAGAAATAATCAATTTAATGGTCTTTACAGGGCTAGCGATCAAAGATTTTTGGCAAGTGGATGATAAAACAATCGTGTTTGTTGCTGATCCTACATTTGGTATGAACAATGTCACGGTACTTTTCTACACCTATGTCTATGATGCTATTGACATTGACATTGATTGATATCTTCATTCAGGTAACATATTGAACTTCAACGTTGGAGCGTCTGTCGATTTAGATATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATATTTTATTGGAAAGAGAAGGTAACATCTCCAATCGATACTTCTGTACAACAGTTACCGTTGTGAGTTTTTGCTTGGTTAGTAAAATATTGGTCGTAACAAGAGTATCTTGTTGAGGATTGTTGGGAGATGAGTCCCACATCGGCTAATTAAGGGGCTGATCATGAGTTTATAAGTAAGGAATGCATCTCTATTGGTATGAGGTCTTTTGGGAAACCAAAAGTAAAACGATGAAAGCTTATGCTCAAAGTGGACAATACATGTCATTGTAGAGATTCGTGATTCCTAACACATCTCATGTTGTCGCTTTGGTGACTTAAACAGGGTGAAGAGGCATCTATTGAAGCAGCTGTCATGGCGATATCTAATTGCTTGAGAGAACCAGTCGGGCCAAATAACTGTTCCGAGATAAAGTAA

mRNA sequence

ATGGCGTTTATGCATCTTCATCATCGCCTTCCATCTCCATCGCTATCATTTTCGGGAGCTTCACCGCCGGTTTACAGATCATCAATCTTCGCATCATCTCGCTTCTCTCCGCCATCAGTTTCATTTCCGTCCCATAAGTTAACCGATTTCACCAACTGCCTTCTTCATCTACCTCCAAAATCTCTGAGTTTCGCGCTCTCTTGGACTCTTGCGCTCGGAGTAGCTCTCTCAGGAGTTGGATTTGCTGACGCCAAAGTTGGGGTTAACAAACCAGAATTACTTCCCAAGGAGTTCACCTCTGTCATTGATGTCGCTGGCTTTCTATCTGATGGCCAGGAATTTAGGCTCAAACAAGAAATTGCTGACATTGAGAAGGAAACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGTGACACCTGGGCTAGCGATCAAAGATTTTTGGCAAGTGGATGATAAAACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAACGTTGGAGCGTCTGTCGATTTAGATATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATATTTTATTGGAAAGAGAAGGGTGAAGAGGCATCTATTGAAGCAGCTGTCATGGCGATATCTAATTGCTTGAGAGAACCAGTCGGGCCAAATAACTGTTCCGAGATAAAGTAA

Coding sequence (CDS)

ATGGCGTTTATGCATCTTCATCATCGCCTTCCATCTCCATCGCTATCATTTTCGGGAGCTTCACCGCCGGTTTACAGATCATCAATCTTCGCATCATCTCGCTTCTCTCCGCCATCAGTTTCATTTCCGTCCCATAAGTTAACCGATTTCACCAACTGCCTTCTTCATCTACCTCCAAAATCTCTGAGTTTCGCGCTCTCTTGGACTCTTGCGCTCGGAGTAGCTCTCTCAGGAGTTGGATTTGCTGACGCCAAAGTTGGGGTTAACAAACCAGAATTACTTCCCAAGGAGTTCACCTCTGTCATTGATGTCGCTGGCTTTCTATCTGATGGCCAGGAATTTAGGCTCAAACAAGAAATTGCTGACATTGAGAAGGAAACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGTGACACCTGGGCTAGCGATCAAAGATTTTTGGCAAGTGGATGATAAAACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAACGTTGGAGCGTCTGTCGATTTAGATATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATATTTTATTGGAAAGAGAAGGGTGAAGAGGCATCTATTGAAGCAGCTGTCATGGCGATATCTAATTGCTTGAGAGAACCAGTCGGGCCAAATAACTGTTCCGAGATAAAGTAA

Protein sequence

MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPKSLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEIADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK

Homology

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BLAST of Csor.00g144020 vs. ExPASy Swiss-Prot
Match: Q9LVV5 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g52970 PE=1 SV=2)

HSP 1 Score: 307.4 bits (786), Expect = 1.4e-82
Identity = 163/225 (72.44%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 11  PSPSLSFSGASPPVYRSS---IFASSRFSPPSVSFPSHKLTDFTNCLLHLPPKSLSFALS 70
           PS   SF   SP V+  S   + +SSR S  +         D  N +     KSLS   S
Sbjct: 9   PSQCRSF---SPFVFNYSSREVSSSSRLSLKTSG-------DEENWVSRFRSKSLSLVFS 68

Query: 71  WTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEIADIEKET 130
             LALG++LSGVGFADAKVGVNKPELLPKEFTSVIDVA FLS+GQE R+ QEIA++EK+T
Sbjct: 69  GALALGLSLSGVGFADAKVGVNKPELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDT 128

Query: 131 GYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLDIPRSFWS 190
           G+KLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGA+VDLDIPRSFWS
Sbjct: 129 GFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWS 188

Query: 191 RLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 233
           RLAGKYGN+FYWKEKGE+ASIEAAVMAIS+CLREPVG NNC+EI+
Sbjct: 189 RLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGRNNCAEIQ 223

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BLAST of Csor.00g144020 vs. NCBI nr
Match: KAG6604403.1 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470 bits (1209), Expect = 3.81e-167
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of Csor.00g144020 vs. NCBI nr
Match: KAG7034554.1 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469 bits (1207), Expect = 7.68e-167
Identity = 231/232 (99.57%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWT+ALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI
Sbjct: 61  SLSFALSWTIALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of Csor.00g144020 vs. NCBI nr
Match: XP_022979097.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 465 bits (1197), Expect = 2.57e-165
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSF GASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEK+TGYKLRVLAQN+PVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNFPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

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BLAST of Csor.00g144020 vs. NCBI nr
Match: XP_022925930.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 464 bits (1194), Expect = 7.37e-165
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSF GASPPVYRSSIFA SRFSPPSVSFPSHK TDFTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFALSRFSPPSVSFPSHKFTDFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of Csor.00g144020 vs. NCBI nr
Match: XP_023543502.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460 bits (1183), Expect = 3.51e-163
Identity = 227/232 (97.84%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSF GASPPVYRSSIFASSRFSPPSVSFPSH LT FTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFASSRFSPPSVSFPSHNLTGFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQELRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of Csor.00g144020 vs. ExPASy TrEMBL
Match: A0A6J1IMV5 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478838 PE=4 SV=1)

HSP 1 Score: 465 bits (1197), Expect = 1.24e-165
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSF GASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEK+TGYKLRVLAQN+PVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNFPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of Csor.00g144020 vs. ExPASy TrEMBL
Match: A0A6J1EJL7 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433197 PE=4 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 3.57e-165
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHHRLPSPSLSF GASPPVYRSSIFA SRFSPPSVSFPSHK TDFTNCLLHLPPK
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFALSRFSPPSVSFPSHKFTDFTNCLLHLPPK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of Csor.00g144020 vs. ExPASy TrEMBL
Match: A0A0A0KH91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 2.53e-139
Identity = 200/232 (86.21%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHH LPSPSLSFS  SPP+ RSS    SRFSPPS   PS K TDF++ LLHLP K
Sbjct: 1   MAFMHLHHHLPSPSLSFSRPSPPLCRSS----SRFSPPSSPLPSQKYTDFSHRLLHLPQK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
           SLSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEK+TGYKLRVLAQNYPVTPGLAIKDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVG NNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228

[Close]

BLAST of Csor.00g144020 vs. ExPASy TrEMBL
Match: A0A1S3CH24 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500819 PE=4 SV=1)

HSP 1 Score: 395 bits (1016), Expect = 4.20e-138
Identity = 198/232 (85.34%), Postives = 210/232 (90.52%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60
           MAFMHLHH LPSPSLSFS +S P+ RSS    SRFSPPS  FPS K TDF + LLHLP K
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSKKYTDFGDRLLHLPQK 60

Query: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120
            LSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  PLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120

Query: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180
           ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228

[Close]

BLAST of Csor.00g144020 vs. ExPASy TrEMBL
Match: A0A6J1CRY9 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013734 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 4.19e-133
Identity = 195/236 (82.63%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MAFMHLHHRLPSPSLSF--SGASPPVYRS--SIFASSRFSPPSVSFPSHKLTDFTNCLLH 60
           MA +HLHH LPS S+S   + ASPP+     S+ ASSRFSPPS    +  LT FTN LLH
Sbjct: 1   MASIHLHHHLPSASISLPKAKASPPLCAPPLSVSASSRFSPPSFPTINLNLTGFTNWLLH 60

Query: 61  LPPKSLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRL 120
            PPKS SFALS  LALG+ALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RL
Sbjct: 61  FPPKSFSFALSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEVRL 120

Query: 121 KQEIADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGAS 180
           KQEIA+IEK+TGYKLRVLAQNYPVTPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+
Sbjct: 121 KQEIAEIEKDTGYKLRVLAQNYPVTPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGAT 180

Query: 181 VDLDIPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232
           VDLDIPRSFWSRLAGKYGNIFYWKEKGE+ SIE+AVMAISNCLREPVGPNNCSEIK
Sbjct: 181 VDLDIPRSFWSRLAGKYGNIFYWKEKGEDTSIESAVMAISNCLREPVGPNNCSEIK 236

[Close]

BLAST of Csor.00g144020 vs. TAIR 10
Match: AT5G52970.1 (thylakoid lumen 15.0 kDa protein )

HSP 1 Score: 307.4 bits (786), Expect = 9.9e-84
Identity = 163/225 (72.44%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 11  PSPSLSFSGASPPVYRSS---IFASSRFSPPSVSFPSHKLTDFTNCLLHLPPKSLSFALS 70
           PS   SF   SP V+  S   + +SSR S  +         D  N +     KSLS   S
Sbjct: 9   PSQCRSF---SPFVFNYSSREVSSSSRLSLKTSG-------DEENWVSRFRSKSLSLVFS 68

Query: 71  WTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEIADIEKET 130
             LALG++LSGVGFADAKVGVNKPELLPKEFTSVIDVA FLS+GQE R+ QEIA++EK+T
Sbjct: 69  GALALGLSLSGVGFADAKVGVNKPELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDT 128

Query: 131 GYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLDIPRSFWS 190
           G+KLRVLAQNYPVTPGLAIKDFWQVDD TIVFVADPTFGNILNFNVGA+VDLDIPRSFWS
Sbjct: 129 GFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWS 188

Query: 191 RLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 233
           RLAGKYGN+FYWKEKGE+ASIEAAVMAIS+CLREPVG NNC+EI+
Sbjct: 189 RLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGRNNCAEIQ 223

The following BLAST results are available for this feature:

BLAST of Csor.00g144020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVV5	1.4e-82	72.44	Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Csor.00g144020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604403.1	3.81e-167	100.00	Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosp...	[more]
KAG7034554.1	7.68e-167	99.57	Thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucurbita argyrosperma subs...	[more]
XP_022979097.1	2.57e-165	98.71	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita maxima]	[more]
XP_022925930.1	7.37e-165	98.71	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita moschata]	[more]
XP_023543502.1	3.51e-163	97.84	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucurbita pepo subsp. ...	[more]

BLAST of Csor.00g144020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IMV5	1.24e-165	98.71	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=...	[more]
A0A6J1EJL7	3.57e-165	98.71	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata O...	[more]
A0A0A0KH91	2.53e-139	86.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1	[more]
A0A1S3CH24	4.20e-138	85.34	thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1CRY9	4.19e-133	82.63	thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Momordica charantia OX=36...	[more]

BLAST of Csor.00g144020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52970.1	9.9e-84	72.44	thylakoid lumen 15.0 kDa protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35514	FAMILY NOT NAMED	coord: 41..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g144020.m01	Csor.00g144020.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane