Csor.00g143330 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCAATCCGGAAAACTGATGCCGAATCTCGATCAGCAGAGCACCAAAATGCTTAATCTTACTGTGCTGCAGAGAATAGATCCTTTCATTGAAGAGATTTTAATCACCGCAGCCCATGTCACATTCTACGAGTTCAATATCGAGACCAATCAATGGGTTAGTCTTAAAACTTGCTATTTTGTTGTTCTTCAGATTTTATTCACACCGCGAATGTTGGGAGGTGGAATTCAAGATCTTATGATTCTTATTCCTTATTGATCTGTTGGACAAATGAATTCATTCCACGAAATTGTTTTTAAGATTGCCTATTCTGCGATATATCCCAAGCTAATGTTAAATGGTTTATCTGGCTGTTTTCTAATATTCTTATATTTCTTAATCTCGTTTTTGTATGGTTGCAGAGTCGCAAGGATGTAGAAGGATCTCTTTTCGTAGTGAAAAGGTTTTCCATCTCTCTCTTTAAATTTAAATTTCCAGCAACTCTTTGTTTCGTAGTTGTTTGGCAGAGATTTTTTGTTTCTGAATTCCCTGATGTTAATACTTGTCTTCTTGTTTCAAGAAATGCTCAACCTCGGTTCCAATTCATTGTGATGAATCGACGCAACACGGGTTAGTAATGTCATTCTTGTTAACTTTAAAGAGTGCAATTGCTAAACATCATGAATTTCTAAAACACTTTTTACGTCGTTCTACTAATTCCAAATCATATCCAATCTTTGTGCTGGCCACAAATAACTTACAGCAGATTTAAGATCAGCACATTTATTAACATGGGAATTGAGAATGGTCAAAGCTCGAGTTTATATCAATTTTCCAATCTTTTCATTGTAGGTGAAAATTGTTAGTTGTATTTGTGTAAACATGCAACTTGAAATTTTAATACGCAAGCTAATAAGTGAAATCCGTATCTTGGATGTTGTAAACTGCATTATCTATTTTGTTCTCAACAAGATTTGAACTTCTAATTTTGTTGAATAATTTTGTTGAAATTGCATACTATCAAAATAGATAGCATTGAATTTAGCTCTTGTATGCTCAAACCTTGGCTTTTGATTTATCTATTTGTTTTATCCAGATAATCTAGTGGAGAATCTACTTGGGGATTTTGAGTATGAAGTGCAAGCTCCTTATTTGTTGTACCGGAATGCTGCTCAAGAAGTTAATGGCATCTGGTTTTACAATCCGCGGGAGTGCGAGGATGTTGCAAACCTCTTCAGTAGGTATAATACCCTTTTTATTCATTGATATCTTGTTAGCCAGACATTCAGACCATGTTTATTGTCATTAAACTGCCATATGAAGTTTGGGTTTTGACACAATTTTATCAATTAGACCACTTTTATGATCGTATTCAACACGTTGCCTTTATTCAACATTTCTTTAAGGATAGATTGGTTGATATGTCACGAGAGATTTAGTAGTGGACGAGGGTGGATGGGTGGACCTAGGTCATTGGACTGTGGTGTCTATGGGCCAAGGGAACTTGAGGAAAAATAATTATGGTGTTTGTTGGCTGATGGGTTAAGAGGTTTCCCAATACCATTATCACTGGTAAAATCGATCTTCTGTTTGTGCTATCTCCCTTTGCCCATTTCTCGAGGGAAGCTTCAAGAAATTTATTGTTGTTGTGGGGCGTGGCTAAGCTAGTGGTACATTTTCTCAAATTAAGTGGTAAGGTCCTAGGGTCTTACAGATCCAGAGTCACATGGCCAAATGTAGCGGTCCTAATACTGTGAGTGGTTTGGAAAGAGAGAAGTAGGACTGTACGAGGAATAGTGTAGGGATGCTGGGTATATGTGTTTACTGTTCAGATATGTTTTGGGGAATTTGGTTGGGGGTGGGGGATAGAAAATGTGTTTTGTGGTTTCTTTGCATACTTTCTTTATCAAAGCAAGACCTTTGTTCCCCATGGCTCATAGCACTTACCTCCATTCCTAATGGTTAGGCTTGGACATCAAGTTCCTTCTTCACCTTTTATATGAATTTTCTCTTGTAAAAATATTATAACCTTGACCTTCATTGTACTGTCAAAGAAATTTTACATTGATCTTTTATGGGTTTCTTACATGAGGCGTACTTGTGCATTTTATTTTGCAGAATACTTAATGCATTCTCGAAGGTTCCTTTAAAGTCCAAAGTTTCTTCAAGCAAGGGGTAACGATAATGTTATTATAATAATTTGAAGCATTTTAGTTTCTACATTTGTACAGTGATGGGCTTTAGGCAACACTGTTGTGTATGAATGTCAATTGCTTGTTATATGAGTCATTGAATCTTGCTTGATGGAAGCCACAACATGTTTCCCATAAAATTAAAAATGGCCATATCAATTTACCTGCCTATTTGATTGAATTATTGGATAGCATTTGTATTTTCCATATTAAAACTTAACCTTCATTAAGATAGATGAAAGAATGTAAGAAAATCATATTAAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAACTAGAGAGCCCAATGCAAAAGGAGCATATGCAGCTAAAACTACAAGAGAAAGAATGTTACAAAAAACGTCTCCAATGGTTGAGAATACGCGACATAGGACAGCCACAGAACTCTTTGATTAGACACATCCAAAGGGAGGTGTGAACTCTACCATAGTCCACTATTCTCCTCAAGGGCTTCAAGTGTTAAACTGAAAAATTGAAGTTCTCTGTTCTATCTGTGGTTTTAGGCGTTACGATTTGGTGTTCTCTGTTCTTTGATTACGTGTTAAGCAGTACCATGTTAACTGTTGGGTTGATATAGTTATGTGAAATCAGTTTTTCAGATTGGCTTGGATATTTTTGAGGCCTGGATATTAACTCATTTTCTACTTTTCTCAATCTTTTATTTATTTTCCAACCCAGTGATTTTGAGGAGCTTGAGGCAGTGCCATCAATGTCAGTGATTGAAGGTCCATTGGAGCCCTCAGCACCACCCTCTACTGTCACCGATGCCCCTGAAGATCCTTCCTTTGTGAACTTCTTTAGTGTTAGTGCTCTAACCTTGTCTTTCTGCTCTTTTTATTTTTTTAGTTACTTTCTTGTGGTAGCGTTGTAAGCTTTTCATTTTCATGGACTTAATATTTTATCTTTATATATCGAACTTGTGCTACTGTAAACCTTTTCTTATCCAACTTTGTTTGTCTACTGTTGAAAATAAACATTTTTGTCAATGAGAGATAAAAAATAAAATATGCGTTTACCAAATTCTGATGAAAATTCCTTTTACTGAATGAAAATCTTCCAAATGAAACAGAACTATTATTGAACTTCAGGGTAAAATGGTTGCAAATGTTGACAAAGAAGTTTACCGATTAAGAGATGATTCATCTGCTAGACCTAGAAATACATCAGCTCATCTATTAACTGGCTTTAGAACTGCTGGTCTGAATTGATTACATAGTTATTGGTGTGAATGACCAGATTCTTATGAAATTCTAGTTCACATTTAAGTTTCATTTTCTGGCTAAATTTTTCGTTGTACCTCAAAATTGTTCTTTAGGTTAGTCAATTGCAAATCAGATACTGAAGCTTGCAGATGTAATAATGTTATTATTATATTGTTCCTTTTTAGTATCCTATCAAACTGTATAGCTGAACTTAATAATTATAAGGCTAAATGAATAAAAATACCCCCGAACTTTGTACTTTGTCTAAAATATACCCCTAAACTTTCAAAAAAAAGTTTCAAAAATACCTTTACTGTAAGTTTTGGATGGAAACGATAGTATTTTATTTCAAAAATACTCTTGAACTTTTAATAGTGTTTCAAACATAACTTGAACTTTAAAAGATTTCGTTAGTACCTTTCATTGTTAAAAAAAAGTTCAAAAATACCCTTACCGTTAGTACTATGTTTAAAAAATACCCATGTAATTTTAAAAATAACATTAAAACTCTTTACCTTGATTAAAAAAAAGTTTAAAAAAATCCTTACCATCGATATATTAACAAAAACCATCTGATCCAAACTTTTTAATGTTACTTTTGAAAGTTCATGTGTATTTTCGGAACATGGTACTAAAGGTAAGGGTATATTTGAATTTTTTAAAAAAGTTTAAAGGTATTTTTGAAGTTTTCAAACAAACTTAAGAGTATTAATGAAACTTTTGAAAGTTAAAAGGGTATTTTTGAAACAAAGTATTAATAGTTTTTATCCAAAACTAACGGTAAAAGTAGTATTGAACTTTTTTTTAAAGTTTAAGGAGATATTTTTGAGACAAAAGACAAAGTTTAAGGGTATTTTTATTAATTTAGCCTAATTATAATTCTATTGTTTGTTTTTTTTCCTTTTAAATATCTTGTTAATTATTTTTGTCTCCCTCGCTTCTTTTCTGGTACTTTCCACCGAGGGGTAAAAAATTTATACATAACGACATTTATGGAAATAAGACCCTTTTTTGCATTATGGTGAAACTCTAAGTTCGGGAGACTTCCATTCTCTTACAAACCACTGACTGCCTTGGTTGGGATGATATCTACAAAGGAACTTGTACATTCAGTAATTGTGTGGTTTATTTTATTTTCAATGCCATTCGGTTACCTTGATGGTATTTCTGCAGGCGGCCATGAATATTGGAAATAATGCTCCAAATATACCGGATTCAAGGCAGGCATATCATGCTTCTGCTATAAACCCTCCATCTTTGATTCCTCCTAATGTTGTATCAGCTCCTGCACTGGCTTCACAGCCATCTTTTCCCATCGTAGCCTCGACTACGCTAACCTCTCCTTATGGACCTCCTGACCCAAACAATGGCACTAATCAGGTCACTAATCTTGTGAAGCCTTCTTCTTTCTTTCCACCTCCATCTTTCTCATCTGCACCAATGAGGCCTTCCTTGCCCTCATCCATGCCAATGCCTACACTTCATCCTCCCCTTAACTTACAAAGCCCATATGGGACCCCAATGCTCCAGCCATTTCCACCGCCTAATCCCCCGCCTTCACTTACACCTGGTTCTGCCCCTGCTCTCAATGATGGACCTCTTATTAACAGGGATAAAGTTCGTGATGCACTTCTGATGCTTGTTCAGGTATCTTTCTCTCATTTTTTTAGCCATATTATGACCAGCAGTTTTGGTTAGAAGTTTATGCTCTGGTGTGGTTTGTTTATTAGCTACCTATGTTAGGACCAGAATTCCAGCCCATAACTAAAAAGAATATGGAAATGAATGTAGAAAGATATTTGCCCAGATAACTCACTAATTAATGATACCCTCAGCAATGGCCTTGTTCACAATTAACCACAATTGCATTGCAATTTGAAACTGATTGTATTCTTATTGATCCTCCATGCTCCCATGTTCTGTCTTAAACAATTTCAACACTTTGAAGCACATGTTTTAAACAATTTCCTTTGACTGAGTGTCTGCAAAAGAAAAATAGTGTTGTTCCGTTGCAGGTGTAGAACAAATTGTCAGTTCTTCCCTCTTATTTTTGACTTGTTAGTTCGATTCTTCGTCGAACAATTTGCCAGTTTCGAGGAGGAGCGATTTAAATTTGTTTCTTATATCATGGCTGAGAGGCTTAACGATCCTCCCCTTCTTTCTGTGCTTTACTTCTAGTATGTAACTCTGTTTCATTATCCAGATCAATCAAAGTTTATGCATTATAGAAACACTTTTTTCTGGGTGTATATAACTCTGTTTCATTATCCAGTTCAATCAAAGTTTATGCATTATAAAAACACTTATTTCTGGGTGTATATAGCTCTGTTTCATTATCCAGTTCAATCAAAGTTTATGCATTGTAAAAACACTTATTTCTGGGTGTGCTGGCTGACCTGTGGAATATTGATTGATATGCTAGGATGATCAATTTATCGATAAGTTTTACCAAGCACTGCTGAAGATGCACCATTCTTGA ATGACTCAATCCGGAAAACTGATGCCGAATCTCGATCAGCAGAGCACCAAAATGCTTAATCTTACTGTGCTGCAGAGAATAGATCCTTTCATTGAAGAGATTTTAATCACCGCAGCCCATGTCACATTCTACGAGTTCAATATCGAGACCAATCAATGGAGTCGCAAGGATGTAGAAGGATCTCTTTTCGTAGTGAAAAGAAATGCTCAACCTCGGTTCCAATTCATTGTGATGAATCGACGCAACACGGATAATCTAGTGGAGAATCTACTTGGGGATTTTGAGTATGAAGTGCAAGCTCCTTATTTGTTGTACCGGAATGCTGCTCAAGAAGTTAATGGCATCTGGTTTTACAATCCGCGGGAGTGCGAGGATGTTGCAAACCTCTTCAGTAGAATACTTAATGCATTCTCGAAGGTTCCTTTAAAGTCCAAAGTTTCTTCAAGCAAGGGTGATTTTGAGGAGCTTGAGGCAGTGCCATCAATGTCAGTGATTGAAGGTCCATTGGAGCCCTCAGCACCACCCTCTACTGTCACCGATGCCCCTGAAGATCCTTCCTTTGTGAACTTCTTTAGTGCGGCCATGAATATTGGAAATAATGCTCCAAATATACCGGATTCAAGGCAGGCATATCATGCTTCTGCTATAAACCCTCCATCTTTGATTCCTCCTAATGTTGTATCAGCTCCTGCACTGGCTTCACAGCCATCTTTTCCCATCGTAGCCTCGACTACGCTAACCTCTCCTTATGGACCTCCTGACCCAAACAATGGCACTAATCAGGTCACTAATCTTGTGAAGCCTTCTTCTTTCTTTCCACCTCCATCTTTCTCATCTGCACCAATGAGGCCTTCCTTGCCCTCATCCATGCCAATGCCTACACTTCATCCTCCCCTTAACTTACAAAGCCCATATGGGACCCCAATGCTCCAGCCATTTCCACCGCCTAATCCCCCGCCTTCACTTACACCTGGTTCTGCCCCTGCTCTCAATGATGGACCTCTTATTAACAGGGATAAAGTTCGTGATGCACTTCTGATGCTTGTTCAGGATGATCAATTTATCGATAAGTTTTACCAAGCACTGCTGAAGATGCACCATTCTTGA ATGACTCAATCCGGAAAACTGATGCCGAATCTCGATCAGCAGAGCACCAAAATGCTTAATCTTACTGTGCTGCAGAGAATAGATCCTTTCATTGAAGAGATTTTAATCACCGCAGCCCATGTCACATTCTACGAGTTCAATATCGAGACCAATCAATGGAGTCGCAAGGATGTAGAAGGATCTCTTTTCGTAGTGAAAAGAAATGCTCAACCTCGGTTCCAATTCATTGTGATGAATCGACGCAACACGGATAATCTAGTGGAGAATCTACTTGGGGATTTTGAGTATGAAGTGCAAGCTCCTTATTTGTTGTACCGGAATGCTGCTCAAGAAGTTAATGGCATCTGGTTTTACAATCCGCGGGAGTGCGAGGATGTTGCAAACCTCTTCAGTAGAATACTTAATGCATTCTCGAAGGTTCCTTTAAAGTCCAAAGTTTCTTCAAGCAAGGGTGATTTTGAGGAGCTTGAGGCAGTGCCATCAATGTCAGTGATTGAAGGTCCATTGGAGCCCTCAGCACCACCCTCTACTGTCACCGATGCCCCTGAAGATCCTTCCTTTGTGAACTTCTTTAGTGCGGCCATGAATATTGGAAATAATGCTCCAAATATACCGGATTCAAGGCAGGCATATCATGCTTCTGCTATAAACCCTCCATCTTTGATTCCTCCTAATGTTGTATCAGCTCCTGCACTGGCTTCACAGCCATCTTTTCCCATCGTAGCCTCGACTACGCTAACCTCTCCTTATGGACCTCCTGACCCAAACAATGGCACTAATCAGGTCACTAATCTTGTGAAGCCTTCTTCTTTCTTTCCACCTCCATCTTTCTCATCTGCACCAATGAGGCCTTCCTTGCCCTCATCCATGCCAATGCCTACACTTCATCCTCCCCTTAACTTACAAAGCCCATATGGGACCCCAATGCTCCAGCCATTTCCACCGCCTAATCCCCCGCCTTCACTTACACCTGGTTCTGCCCCTGCTCTCAATGATGGACCTCTTATTAACAGGGATAAAGTTCGTGATGCACTTCTGATGCTTGTTCAGGATGATCAATTTATCGATAAGTTTTACCAAGCACTGCTGAAGATGCACCATTCTTGA MTQSGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITAAHVTFYEFNIETNQWSRKDVEGSLFVVKRNAQPRFQFIVMNRRNTDNLVENLLGDFEYEVQAPYLLYRNAAQEVNGIWFYNPRECEDVANLFSRILNAFSKVPLKSKVSSSKGDFEELEAVPSMSVIEGPLEPSAPPSTVTDAPEDPSFVNFFSAAMNIGNNAPNIPDSRQAYHASAINPPSLIPPNVVSAPALASQPSFPIVASTTLTSPYGPPDPNNGTNQVTNLVKPSSFFPPPSFSSAPMRPSLPSSMPMPTLHPPLNLQSPYGTPMLQPFPPPNPPPSLTPGSAPALNDGPLINRDKVRDALLMLVQDDQFIDKFYQALLKMHHS Homology
BLAST of Csor.00g143330 vs. ExPASy Swiss-Prot
Match: Q9SJF3 (mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g08370 PE=1 SV=2) HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-108 Identity = 229/377 (60.74%), Postives = 279/377 (74.01%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy Swiss-Prot
Match: Q8IZD4 (mRNA-decapping enzyme 1B OS=Homo sapiens OX=9606 GN=DCP1B PE=1 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 1.4e-23 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy Swiss-Prot
Match: Q5R413 (mRNA-decapping enzyme 1B OS=Pongo abelii OX=9601 GN=DCP1B PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.4e-23 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy Swiss-Prot
Match: Q3U564 (mRNA-decapping enzyme 1B OS=Mus musculus OX=10090 GN=Dcp1b PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 7.5e-22 Identity = 50/149 (33.56%), Postives = 84/149 (56.38%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy Swiss-Prot
Match: I3LHS8 (mRNA-decapping enzyme 1A OS=Sus scrofa OX=9823 GN=DCP1A PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.2e-21 Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 0
BLAST of Csor.00g143330 vs. NCBI nr
Match: KAG6604334.1 (mRNA-decapping enzyme-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 724 bits (1868), Expect = 5.05e-263 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
BLAST of Csor.00g143330 vs. NCBI nr
Match: XP_023543322.1 (mRNA-decapping enzyme-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 722 bits (1863), Expect = 2.92e-262 Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 0
BLAST of Csor.00g143330 vs. NCBI nr
Match: XP_022925995.1 (mRNA-decapping enzyme-like protein [Cucurbita moschata]) HSP 1 Score: 719 bits (1856), Expect = 3.41e-261 Identity = 365/368 (99.18%), Postives = 366/368 (99.46%), Query Frame = 0
BLAST of Csor.00g143330 vs. NCBI nr
Match: XP_022979172.1 (mRNA-decapping enzyme-like protein [Cucurbita maxima]) HSP 1 Score: 718 bits (1854), Expect = 6.88e-261 Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0
BLAST of Csor.00g143330 vs. NCBI nr
Match: XP_004143332.2 (mRNA-decapping enzyme-like protein [Cucumis sativus] >KGN48282.1 hypothetical protein Csa_002753 [Cucumis sativus]) HSP 1 Score: 697 bits (1798), Expect = 2.36e-252 Identity = 353/368 (95.92%), Postives = 360/368 (97.83%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy TrEMBL
Match: A0A6J1EJS3 (mRNA-decapping enzyme-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433245 PE=3 SV=1) HSP 1 Score: 719 bits (1856), Expect = 1.65e-261 Identity = 365/368 (99.18%), Postives = 366/368 (99.46%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy TrEMBL
Match: A0A6J1IN25 (mRNA-decapping enzyme-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478890 PE=3 SV=1) HSP 1 Score: 718 bits (1854), Expect = 3.33e-261 Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy TrEMBL
Match: A0A0A0KIR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G453810 PE=3 SV=1) HSP 1 Score: 697 bits (1798), Expect = 1.14e-252 Identity = 353/368 (95.92%), Postives = 360/368 (97.83%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy TrEMBL
Match: A0A1S3CHD0 (mRNA-decapping enzyme-like protein OS=Cucumis melo OX=3656 GN=LOC103500917 PE=3 SV=1) HSP 1 Score: 695 bits (1793), Expect = 6.60e-252 Identity = 352/368 (95.65%), Postives = 359/368 (97.55%), Query Frame = 0
BLAST of Csor.00g143330 vs. ExPASy TrEMBL
Match: A0A6J1BUN2 (mRNA-decapping enzyme-like protein OS=Momordica charantia OX=3673 GN=LOC111005690 PE=3 SV=1) HSP 1 Score: 686 bits (1770), Expect = 2.19e-248 Identity = 349/369 (94.58%), Postives = 357/369 (96.75%), Query Frame = 0
BLAST of Csor.00g143330 vs. TAIR 10
Match: AT1G08370.1 (decapping 1 ) HSP 1 Score: 394.8 bits (1013), Expect = 7.5e-110 Identity = 229/377 (60.74%), Postives = 279/377 (74.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|