Csor.00g143250 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTCGCCGGAGAAATCTCCAACTCACCTCCCTCTCCGTCGATCTCAACATTTGCAGACCAAAACTCTCTCACCTCTTCCACCATCTCAAACCAAAGTCCTCCTCCAAATCCCCCAATCATTGCTTCTCCTCCGACTCCGATTCGCCGCCTTTCTCCGACTCTGACTCCGATACCAGAGCTTCCATCACCTTCCGTGGCTTCGGAAAGTCCGGCGGCGAGAGCGTCGCCGTCGAGAAGGATTCGGACGATCCGTACCTCGATTTCCGGCATTCAATGGTTCAGATGATTCTGGAGAACGAGATATACTCGAAGGATGACTTACGAGGGCTCCTTCGCTGTTTCTTGCAGTTGAATTCCCCTTCTCACCATGAAATTATAATTAGGGCTTTCGCTGAGATTTGGGACTCTGTTTTCTCTGCCAGGTTCCCGGTTTCTCCCCCGATCTTCCGCTTTTGA ATGGCGGCTCGCCGGAGAAATCTCCAACTCACCTCCCTCTCCGTCGATCTCAACATTTGCAGACCAAAACTCTCTCACCTCTTCCACCATCTCAAACCAAAGTCCTCCTCCAAATCCCCCAATCATTGCTTCTCCTCCGACTCCGATTCGCCGCCTTTCTCCGACTCTGACTCCGATACCAGAGCTTCCATCACCTTCCGTGGCTTCGGAAAGTCCGGCGGCGAGAGCGTCGCCGTCGAGAAGGATTCGGACGATCCGTACCTCGATTTCCGGCATTCAATGGTTCAGATGATTCTGGAGAACGAGATATACTCGAAGGATGACTTACGAGGGCTCCTTCGCTGTTTCTTGCAGTTGAATTCCCCTTCTCACCATGAAATTATAATTAGGGCTTTCGCTGAGATTTGGGACTCTGTTTTCTCTGCCAGGTTCCCGGTTTCTCCCCCGATCTTCCGCTTTTGA ATGGCGGCTCGCCGGAGAAATCTCCAACTCACCTCCCTCTCCGTCGATCTCAACATTTGCAGACCAAAACTCTCTCACCTCTTCCACCATCTCAAACCAAAGTCCTCCTCCAAATCCCCCAATCATTGCTTCTCCTCCGACTCCGATTCGCCGCCTTTCTCCGACTCTGACTCCGATACCAGAGCTTCCATCACCTTCCGTGGCTTCGGAAAGTCCGGCGGCGAGAGCGTCGCCGTCGAGAAGGATTCGGACGATCCGTACCTCGATTTCCGGCATTCAATGGTTCAGATGATTCTGGAGAACGAGATATACTCGAAGGATGACTTACGAGGGCTCCTTCGCTGTTTCTTGCAGTTGAATTCCCCTTCTCACCATGAAATTATAATTAGGGCTTTCGCTGAGATTTGGGACTCTGTTTTCTCTGCCAGGTTCCCGGTTTCTCCCCCGATCTTCCGCTTTTGA MAARRRNLQLTSLSVDLNICRPKLSHLFHHLKPKSSSKSPNHCFSSDSDSPPFSDSDSDTRASITFRGFGKSGGESVAVEKDSDDPYLDFRHSMVQMILENEIYSKDDLRGLLRCFLQLNSPSHHEIIIRAFAEIWDSVFSARFPVSPPIFRF Homology
BLAST of Csor.00g143250 vs. ExPASy Swiss-Prot
Match: Q3EAL1 (Transcription repressor OFP6 OS=Arabidopsis thaliana OX=3702 GN=OFP6 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24 Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy Swiss-Prot
Match: Q3E9B4 (Transcription repressor OFP8 OS=Arabidopsis thaliana OX=3702 GN=OFP8 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy Swiss-Prot
Match: Q94CV1 (Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14 Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy Swiss-Prot
Match: Q9ZU65 (Transcription repressor OFP7 OS=Arabidopsis thaliana OX=3702 GN=OFP7 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy Swiss-Prot
Match: F4HNU8 (Transcription repressor OFP4 OS=Arabidopsis thaliana OX=3702 GN=OFP4 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.1e-10 Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0
BLAST of Csor.00g143250 vs. NCBI nr
Match: XP_022925974.1 (transcription repressor OFP6-like [Cucurbita moschata] >KAG6604326.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034478.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307 bits (787), Expect = 2.05e-105 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g143250 vs. NCBI nr
Match: XP_023544919.1 (transcription repressor OFP6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 304 bits (779), Expect = 3.40e-104 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Csor.00g143250 vs. NCBI nr
Match: XP_022979076.1 (transcription repressor OFP6-like [Cucurbita maxima]) HSP 1 Score: 302 bits (773), Expect = 2.80e-103 Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Csor.00g143250 vs. NCBI nr
Match: KAG6595162.1 (Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027177.1 Transcription repressor OFP6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 267 bits (683), Expect = 1.64e-89 Identity = 141/157 (89.81%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of Csor.00g143250 vs. NCBI nr
Match: XP_022963122.1 (transcription repressor OFP6-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 267 bits (683), Expect = 1.64e-89 Identity = 141/157 (89.81%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy TrEMBL
Match: A0A6J1EDP8 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111433229 PE=4 SV=1) HSP 1 Score: 307 bits (787), Expect = 9.91e-106 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy TrEMBL
Match: A0A6J1IPR9 (Transcription repressor OS=Cucurbita maxima OX=3661 GN=LOC111478821 PE=4 SV=1) HSP 1 Score: 302 bits (773), Expect = 1.35e-103 Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy TrEMBL
Match: A0A6J1HEC8 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111463422 PE=4 SV=1) HSP 1 Score: 267 bits (683), Expect = 7.94e-90 Identity = 141/157 (89.81%), Postives = 146/157 (92.99%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy TrEMBL
Match: A0A6J1HGU3 (Transcription repressor OS=Cucurbita moschata OX=3662 GN=LOC111463422 PE=4 SV=1) HSP 1 Score: 249 bits (637), Expect = 5.44e-83 Identity = 131/153 (85.62%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of Csor.00g143250 vs. ExPASy TrEMBL
Match: A0A0A0KKL0 (Transcription repressor OS=Cucumis sativus OX=3659 GN=Csa_6G454395 PE=4 SV=1) HSP 1 Score: 248 bits (632), Expect = 4.71e-82 Identity = 128/153 (83.66%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of Csor.00g143250 vs. TAIR 10
Match: AT2G36026.1 (Ovate family protein ) HSP 1 Score: 117.5 bits (293), Expect = 9.6e-27 Identity = 75/148 (50.68%), Postives = 92/148 (62.16%), Query Frame = 0
BLAST of Csor.00g143250 vs. TAIR 10
Match: AT3G52525.1 (ovate family protein 6 ) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25 Identity = 72/148 (48.65%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of Csor.00g143250 vs. TAIR 10
Match: AT5G19650.1 (ovate family protein 8 ) HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of Csor.00g143250 vs. TAIR 10
Match: AT2G18500.1 (ovate family protein 7 ) HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Csor.00g143250 vs. TAIR 10
Match: AT1G06920.1 (ovate family protein 4 ) HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11 Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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