Csor.00g142790 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g142790
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 7900845 .. 7901205 (+)
RNA-Seq ExpressionCsor.00g142790
SyntenyCsor.00g142790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACGGCGCTGATACTTGAAGGCATTGATGCAGCGGAGGGTCTGAGCGACAGAGACATAGAAAGTGAGATGGGAAAGGGAGAGGAGAGCAATGGGTATCCAGCAATGGCGGCACTGGAGGCGAGGGGAAAGGGATTGGGCTAAGAAGATGAGAGCCAGAAAAATGAAGAAGAGGTGGAAGAGGTTGTGGAGCTGTTTCTTTTGAAGATCTATGGCGTGCTTCTTCTCTAGGGTCTTCTCGAAATGGAGCTGGATTAAGGTGTTCAGTGCCTGGAGAGCTGTCTCTGTGGAGATTGATGGGTGTGGCCGAGTGTGGGCTTCCAAATCCGCCATTGATTACGAGCTTGCTTCAATCTGA

mRNA sequence

ATGGCAACGGCGCTGATACTTGAAGGCATTGATGCAGCGGAGGGTCTGAGCGACAGAGACATAGAAAGTGAGATGGGAAAGGGAGAGGAGAGCAATGGGGTCTTCTCGAAATGGAGCTGGATTAAGGTGTTCAGTGCCTGGAGAGCTGTCTCTGTGGAGATTGATGGGTGTGGCCGAGTGTGGGCTTCCAAATCCGCCATTGATTACGAGCTTGCTTCAATCTGA

Coding sequence (CDS)

ATGGCAACGGCGCTGATACTTGAAGGCATTGATGCAGCGGAGGGTCTGAGCGACAGAGACATAGAAAGTGAGATGGGAAAGGGAGAGGAGAGCAATGGGGTCTTCTCGAAATGGAGCTGGATTAAGGTGTTCAGTGCCTGGAGAGCTGTCTCTGTGGAGATTGATGGGTGTGGCCGAGTGTGGGCTTCCAAATCCGCCATTGATTACGAGCTTGCTTCAATCTGA

Protein sequence

MATALILEGIDAAEGLSDRDIESEMGKGEESNGVFSKWSWIKVFSAWRAVSVEIDGCGRVWASKSAIDYELASI
Homology
[Close]
BLAST of Csor.00g142790 vs. NCBI nr
Match: KAG6604269.1 (hypothetical protein SDJN03_04878, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (379), Expect = 1.07e-45
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MATALILEGIDAAEGLSDRDIESEMGKGEESNGVFSKWSWIKVFSAWRAVSVEIDGCGRV 60
          MATALILEGIDAAEGLSDRDIESEMGKGEESNGVFSKWSWIKVFSAWRAVSVEIDGCGRV
Sbjct: 1  MATALILEGIDAAEGLSDRDIESEMGKGEESNGVFSKWSWIKVFSAWRAVSVEIDGCGRV 60

Query: 61 WASKSAIDYELASI 74
          WASKSAIDYELASI
Sbjct: 61 WASKSAIDYELASI 74

[Close]
BLAST of Csor.00g142790 vs. NCBI nr
Match: KAA0025559.1 (hypothetical protein E6C27_scaffold253G00480 [Cucumis melo var. makuwa] >TYK12434.1 hypothetical protein E5676_scaffold255G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 2.68e-07
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 1  MATALILEGIDAAEGLSDRDIESEMGKGEESNG 33
          MATALILE IDA EGLS+RDIE+EMG GE+SNG
Sbjct: 39 MATALILEAIDATEGLSNRDIETEMGNGEKSNG 71

[Close]
BLAST of Csor.00g142790 vs. NCBI nr
Match: KAG6595114.1 (hypothetical protein SDJN03_11667, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 53.9 bits (128), Expect = 2.75e-07
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0 

Query: 1  MATALILEGIDAAEGLSDRDIESEMGKGEESNG 33
          MA AL+LE IDAAEGL DRD+E EMG GE+SNG
Sbjct: 1  MAAALVLEAIDAAEGLGDRDVEGEMGNGEKSNG 33

[Close]
BLAST of Csor.00g142790 vs. ExPASy TrEMBL
Match: A0A0A0KJ28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485135 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.52e-08
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 1  MATALILEGIDAAEGLSDRDIESEMGKGEESNG 33
          MATAL+LE IDA EGLSDRD+E+EMG GE+SNG
Sbjct: 58 MATALVLEAIDATEGLSDRDVETEMGNGEKSNG 90

[Close]
BLAST of Csor.00g142790 vs. ExPASy TrEMBL
Match: A0A5D3CMS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00090 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.30e-07
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 1  MATALILEGIDAAEGLSDRDIESEMGKGEESNG 33
          MATALILE IDA EGLS+RDIE+EMG GE+SNG
Sbjct: 39 MATALILEAIDATEGLSNRDIETEMGNGEKSNG 71

The following BLAST results are available for this feature:
BLAST of Csor.00g142790 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g142790 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604269.11.07e-45100.00hypothetical protein SDJN03_04878, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0025559.12.68e-0781.82hypothetical protein E6C27_scaffold253G00480 [Cucumis melo var. makuwa] >TYK1243... [more]
KAG6595114.12.75e-0775.76hypothetical protein SDJN03_11667, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g142790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ286.52e-0878.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485135 PE=4 SV=1[more]
A0A5D3CMS21.30e-0781.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Csor.00g142790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g142790.m01Csor.00g142790.m01mRNA