Csor.00g139570 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g139570
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 14300968 .. 14302434 (+)
RNA-Seq ExpressionCsor.00g139570
SyntenyCsor.00g139570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTTCTTGGTTTGATGTGGGTTTGTTTAGCAAAGGGCTTCCCCGCAGAGTTTATTGGCATTCTGTCCACCTCCTTTCCCGCCTTCACTGAGTGTTTACTGTTTGGTTGGGGTTTTATATGATGTTGGGGAGGTGGGCATGCTGCCAATTCAGCTCTGTCGGATTCTCTTTGTAACACCTCTCATTACAAACAAGTTGAATTCAAGGCTTGTTTACAAGGTTTCAATGAAGTTTGGGTCAAATTCTGAATCTTCAAATCTCAACTCTCCAGTGCAAATTTTGTGAAGAAAAATGAAATGAAATGATTGTTTCTCTTTTGCAGCTCACGGGGCCGAAATCATAATGATGATGCACGCAAGGGTAATAACTTTTTTACTTTTTCAACTCATTTCTGTCTCAAAAATTCAAATTAAAAATGCTTTATGGGTTTTGCGACAATGATTTGTTATCCGTGTGTGTTCTTAGCCTTCATGCATGCCTTGTCTCTCTGTCTGTCTGTCTGTCTGTCCCTCATTTTTAATTTCACTTTAATTATTACATTATGTTTGGTTTCATAATCCCTTTGAGTTATTCAATTTCCCAACCCTTCATTTCAATACCCAAAGATGCTTCCATTGTTACCCTCTCCTCATGGTGGCGCGTGTGTGTTTCAGTCGGCGGTTCGCGGCGGCGATTGGAGACCACGGATTGTTTATGGACGAGTGTTGGTTGGTTTGAAGGTGTGCGTATTTTCTGGTATTGGAATTTGAGCCTATGAAGATCTGATATGATCTTCTTCTTTGAGCTTTGGAGTTAGGGTTTGGTGTCCTAATATTCTTCTGCAGATCACTGTCGTAGGTAATTTATTCTCTCCATTTTTTGTTTTCTAAAAAATCATTTTCTTAATATGTTTCTTTTTAAATTACCCTAAATTATTTATATTGTTTATGGCTGTTAAATTAGTTTAATATTTATATTTATATTTATTTAGTCTCTCTAAACACTTACTTATTTTCCCTATTTTTTCCTTCTCTTTAGGTCTCTTAATATATTTATTTCCAATGTCTTGAATATTTTAGCGAAGAGGATACTCATTACTTAATTTTTTTCATTTAAATATTCGTCAAGTCATTCTGCCTAGGATTATATTTTCGAATTTTTTGAATCATACGCTTTAACCTAAAGTATTGAGCTTCGGTCAGTTTGGAGAGAAAATTGGTCTAATCTACTTAAAAAATGGTATACATACGGAAAAAAAATAGATGTTCATGGGGTAGGGACGGAAATTTTGTTCCCTCCCCTATCCCTATCTTCCCATCCCCTCTACCATCCATGTCATCTATTTTATTCTTAATTGCTGTGAAAATTTTCATTTATTTTTGCAGAATTTGGGATGAGATTTCCTACGAATAAATTTTACATTTGTGCAGGGTTCGAGGTGAGATTCTCGGTGAAGAATTTGTTGAGATCAGGTTTCAGGTAA

mRNA sequence

ATGGGGTTTTCTTGGTTTGATGTGGCTCTGTCGGATTCTCTTTGTAACACCTCTCATTACAAACAAGTTGAATTCAAGGCTTGTTTACAAGCTCACGGGGCCGAAATCATAATGATGATGCACGCAAGGTCGGCGGTTCGCGGCGGCGATTGGAGACCACGGATTGTTTATGGACGAGTGTTGGTTGGTTTGAAGATCACTGTCGTAGGGTTCGAGGTGAGATTCTCGGTGAAGAATTTGTTGAGATCAGGTTTCAGGTAA

Coding sequence (CDS)

ATGGGGTTTTCTTGGTTTGATGTGGCTCTGTCGGATTCTCTTTGTAACACCTCTCATTACAAACAAGTTGAATTCAAGGCTTGTTTACAAGCTCACGGGGCCGAAATCATAATGATGATGCACGCAAGGTCGGCGGTTCGCGGCGGCGATTGGAGACCACGGATTGTTTATGGACGAGTGTTGGTTGGTTTGAAGATCACTGTCGTAGGGTTCGAGGTGAGATTCTCGGTGAAGAATTTGTTGAGATCAGGTTTCAGGTAA

Protein sequence

MGFSWFDVALSDSLCNTSHYKQVEFKACLQAHGAEIIMMMHARSAVRGGDWRPRIVYGRVLVGLKITVVGFEVRFSVKNLLRSGFR
Homology
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BLAST of Csor.00g139570 vs. NCBI nr
Match: KAG6608617.1 (hypothetical protein SDJN03_01959, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178 bits (452), Expect = 1.82e-56
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MGFSWFDVALSDSLCNTSHYKQVEFKACLQAHGAEIIMMMHARSAVRGGDWRPRIVYGRV 60
          MGFSWFDVALSDSLCNTSHYKQVEFKACLQAHGAEIIMMMHARSAVRGGDWRPRIVYGRV
Sbjct: 1  MGFSWFDVALSDSLCNTSHYKQVEFKACLQAHGAEIIMMMHARSAVRGGDWRPRIVYGRV 60

Query: 61 LVGLKITVVGFEVRFSVKNLLRSGFR 86
          LVGLKITVVGFEVRFSVKNLLRSGFR
Sbjct: 61 LVGLKITVVGFEVRFSVKNLLRSGFR 86

The following BLAST results are available for this feature:
BLAST of Csor.00g139570 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g139570 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6608617.11.82e-56100.00hypothetical protein SDJN03_01959, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g139570 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g139570 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g139570.m01Csor.00g139570.m01mRNA