Csor.00g133280 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g133280
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 13491134 .. 13491397 (-)
RNA-Seq ExpressionCsor.00g133280
SyntenyCsor.00g133280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACTGAAATCAATTCCACAGAACCGGCTTTGAAATCGACAAGAAAACTTAGGGAATGGTGGAATTTATTGTCGAAATGGATCGCCAGCCGCATCGTTGTGAAGTTCCTTTCGCTTTCAGAAAATGATCTAAGCATACAGAACACTGAAAATTGGAAGTATCGTAAATTATACAAGTCAAACCTATCTGTAGCGGCCGGATCATACGGCATTGTCAACTGGCACCATGAAGCCATTGCAACTGGGGAAATTAATAAGTAA

mRNA sequence

ATGATCACTGAAATCAATTCCACAGAACCGGCTTTGAAATCGACAAGAAAACTTAGGGAATGGTGGAATTTATTGTCGAAATGGATCGCCAGCCGCATCGTTGTGAAGTTCCTTTCGCTTTCAGAAAATGATCTAAGCATACAGAACACTGAAAATTGGAAGTATCGTAAATTATACAAGTCAAACCTATCTGTAGCGGCCGGATCATACGGCATTGTCAACTGGCACCATGAAGCCATTGCAACTGGGGAAATTAATAAGTAA

Coding sequence (CDS)

ATGATCACTGAAATCAATTCCACAGAACCGGCTTTGAAATCGACAAGAAAACTTAGGGAATGGTGGAATTTATTGTCGAAATGGATCGCCAGCCGCATCGTTGTGAAGTTCCTTTCGCTTTCAGAAAATGATCTAAGCATACAGAACACTGAAAATTGGAAGTATCGTAAATTATACAAGTCAAACCTATCTGTAGCGGCCGGATCATACGGCATTGTCAACTGGCACCATGAAGCCATTGCAACTGGGGAAATTAATAAGTAA

Protein sequence

MITEINSTEPALKSTRKLREWWNLLSKWIASRIVVKFLSLSENDLSIQNTENWKYRKLYKSNLSVAAGSYGIVNWHHEAIATGEINK
Homology
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BLAST of Csor.00g133280 vs. NCBI nr
Match: KAG6582065.1 (hypothetical protein SDJN03_22067, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180 bits (457), Expect = 3.38e-57
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 1  MITEINSTEPALKSTRKLREWWNLLSKWIASRIVVKFLSLSENDLSIQNTENWKYRKLYK 60
          MITEINSTEPALKSTRKLREWWNLLSKWIASRIVVKFLSLSENDLSIQNTENWKYRKLYK
Sbjct: 1  MITEINSTEPALKSTRKLREWWNLLSKWIASRIVVKFLSLSENDLSIQNTENWKYRKLYK 60

Query: 61 SNLSVAAGSYGIVNWHHEAIATGEINK 87
          SNLSVAAGSYGIVNWHHEAIATGEINK
Sbjct: 61 SNLSVAAGSYGIVNWHHEAIATGEINK 87

The following BLAST results are available for this feature:
BLAST of Csor.00g133280 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g133280 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6582065.13.38e-57100.00hypothetical protein SDJN03_22067, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g133280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g133280 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g133280.m01Csor.00g133280.m01mRNA