Csor.00g132210 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g132210
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionRetrotrans_gag domain-containing protein
LocationCsor_Chr02: 410675 .. 411751 (-)
RNA-Seq ExpressionCsor.00g132210
SyntenyCsor.00g132210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCAAAACTCAGGCGTTCACCGCCGCCGTTGCGGCGGCGTAACTACGCCACCGATTATGATGCTTCCCTATCTCAATCTCTCGACGCATCAAACGAAGACGACTACGACGCTTCTGAATCTAATAACTTCCAAACCAGCGGCCACAAATCAAAATCCCTAGAAATCAATGAAGAATCCGCCACGAACAGTCCAACGAATTTACAGAGTCCAAACGCCGCCGCAACAGTATTTCCATACATTAATATCGCACCGTTGCCTGTTTTCCACGGCGGCTCCGATGAATGTCCGGCTACGCATTTAAGCAGATTCGCCAAAGTTTGCCGTGCGAACAACGCGGCCTCCGTCGAGATTATGATGAGAATCTTTCCGGTAACGTTACAGGGTGAGGCTCTGCTTTGGTACGACTTGAACATTGAACCGTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTCGTTCTTGGACGCGTATAACAAAATCGAATTGGCTGAGCAGTTGCGATCGGAGCTTATGACGATCAGTCAACGGCCGGAGGAGAATGTTCGTTCTTATTTTCTGAGGCTGCAGTTGATCCTGAAGAAATGGCCGCCGGGAAACGAACTTTCCGATGGGTTTTTGAAAGCGATTTTCATGGATGGATTGAGGGAAGAGTTTAAGGAATGGATGATTCCACAGAAACCGGATTCTCTGAACGAGGCGTTGCGACTTGCATTTGGGCTCGAACAAGTTACGGTCATCCGTACTTCCGGCGGAAAGCGGTTTCTCCGGTGTGGGTTTTGTGAGGGGCGGCATGAGGAATTGGTTTGTGAGGTTAGGGAAAGAATGAGACGGTTGTGGAAGAGTAGGGAAAAGAAGAATGGCGGCGATATGGCGGAGAGCGAGGGGCATAATACGGCGGAGCTTGTGCGGTCGGTTTCGGCGATAAGCAGAAATGAAGCGGAGGTTGGGAAGGACGGCGGGGAAATGGTGGGTTTGAAGAAGAAAGGTCAGTGTCAGTGCTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGCTATCCAAAACTTCTAAACCCTAA

mRNA sequence

ATGGCGCCAAAACTCAGGCGTTCACCGCCGCCGTTGCGGCGGCGTAACTACGCCACCGATTATGATGCTTCCCTATCTCAATCTCTCGACGCATCAAACGAAGACGACTACGACGCTTCTGAATCTAATAACTTCCAAACCAGCGGCCACAAATCAAAATCCCTAGAAATCAATGAAGAATCCGCCACGAACAGTCCAACGAATTTACAGAGTCCAAACGCCGCCGCAACAGTATTTCCATACATTAATATCGCACCGTTGCCTGTTTTCCACGGCGGCTCCGATGAATGTCCGGCTACGCATTTAAGCAGATTCGCCAAAGTTTGCCGTGCGAACAACGCGGCCTCCGTCGAGATTATGATGAGAATCTTTCCGGTAACGTTACAGGGTGAGGCTCTGCTTTGGTACGACTTGAACATTGAACCGTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTCGTTCTTGGACGCGTATAACAAAATCGAATTGGCTGAGCAGTTGCGATCGGAGCTTATGACGATCAGTCAACGGCCGGAGGAGAATGTTCGTTCTTATTTTCTGAGGCTGCAGTTGATCCTGAAGAAATGGCCGCCGGGAAACGAACTTTCCGATGGGTTTTTGAAAGCGATTTTCATGGATGGATTGAGGGAAGAGTTTAAGGAATGGATGATTCCACAGAAACCGGATTCTCTGAACGAGGCGTTGCGACTTGCATTTGGGCTCGAACAAGTTACGGTCATCCGTACTTCCGGCGGAAAGCGGTTTCTCCGGTGTGGGTTTTGTGAGGGGCGGCATGAGGAATTGGTTTGTGAGGTTAGGGAAAGAATGAGACGGTTGTGGAAGAGTAGGGAAAAGAAGAATGGCGGCGATATGGCGGAGAGCGAGGGGCATAATACGGCGGAGCTTGTGCGGTCGGTTTCGGCGATAAGCAGAAATGAAGCGGAGGTTGGGAAGGACGGCGGGGAAATGGTGGGTTTGAAGAAGAAAGGTCAGTGTCAGTGCTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGCTATCCAAAACTTCTAAACCCTAA

Coding sequence (CDS)

ATGGCGCCAAAACTCAGGCGTTCACCGCCGCCGTTGCGGCGGCGTAACTACGCCACCGATTATGATGCTTCCCTATCTCAATCTCTCGACGCATCAAACGAAGACGACTACGACGCTTCTGAATCTAATAACTTCCAAACCAGCGGCCACAAATCAAAATCCCTAGAAATCAATGAAGAATCCGCCACGAACAGTCCAACGAATTTACAGAGTCCAAACGCCGCCGCAACAGTATTTCCATACATTAATATCGCACCGTTGCCTGTTTTCCACGGCGGCTCCGATGAATGTCCGGCTACGCATTTAAGCAGATTCGCCAAAGTTTGCCGTGCGAACAACGCGGCCTCCGTCGAGATTATGATGAGAATCTTTCCGGTAACGTTACAGGGTGAGGCTCTGCTTTGGTACGACTTGAACATTGAACCGTACCCTCCAATTTCTTGGGAAGAATTGAAGTCTTCGTTCTTGGACGCGTATAACAAAATCGAATTGGCTGAGCAGTTGCGATCGGAGCTTATGACGATCAGTCAACGGCCGGAGGAGAATGTTCGTTCTTATTTTCTGAGGCTGCAGTTGATCCTGAAGAAATGGCCGCCGGGAAACGAACTTTCCGATGGGTTTTTGAAAGCGATTTTCATGGATGGATTGAGGGAAGAGTTTAAGGAATGGATGATTCCACAGAAACCGGATTCTCTGAACGAGGCGTTGCGACTTGCATTTGGGCTCGAACAAGTTACGGTCATCCGTACTTCCGGCGGAAAGCGGTTTCTCCGGTGTGGGTTTTGTGAGGGGCGGCATGAGGAATTGGTTTGTGAGGTTAGGGAAAGAATGAGACGGTTGTGGAAGAGTAGGGAAAAGAAGAATGGCGGCGATATGGCGGAGAGCGAGGGGCATAATACGGCGGAGCTTGTGCGGTCGGTTTCGGCGATAAGCAGAAATGAAGCGGAGGTTGGGAAGGACGGCGGGGAAATGGTGGGTTTGAAGAAGAAAGGTCAGTGTCAGTGCTGGAAGCATCAGTGTGGGATGAAGAAATTGGATCGAAACCTTAGCATGCTATCCAAAACTTCTAAACCCTAA

Protein sequence

MAPKLRRSPPPLRRRNYATDYDASLSQSLDASNEDDYDASESNNFQTSGHKSKSLEINEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMAESEGHNTAELVRSVSAISRNEAEVGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSMLSKTSKP
Homology
BLAST of Csor.00g132210 vs. NCBI nr
Match: KAG6604769.1 (hypothetical protein SDJN03_02086, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 714 bits (1842), Expect = 2.13e-259
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0

Query: 1   MAPKLRRSPPPLRRRNYATDYDASLSQSLDASNEDDYDASESNNFQTSGHKSKSLEINEE 60
           MAPKLRRSPPPLRRRNYATDYDASLSQSLDASNEDDYDASESNNFQTSGHKSKSLEINEE
Sbjct: 1   MAPKLRRSPPPLRRRNYATDYDASLSQSLDASNEDDYDASESNNFQTSGHKSKSLEINEE 60

Query: 61  SATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIM 120
           SATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIM
Sbjct: 61  SATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIM 120

Query: 121 MRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPE 180
           MRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPE
Sbjct: 121 MRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPE 180

Query: 181 ENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAF 240
           ENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAF
Sbjct: 181 ENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAF 240

Query: 241 GLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMAESEGHNT 300
           GLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMAESEGHNT
Sbjct: 241 GLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMAESEGHNT 300

Query: 301 AELVRSVSAISRNEAEVGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSMLSKTSKP 358
           AELVRSVSAISRNEAEVGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSMLSKTSKP
Sbjct: 301 AELVRSVSAISRNEAEVGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSMLSKTSKP 358

BLAST of Csor.00g132210 vs. NCBI nr
Match: CAN62167.1 (hypothetical protein VITISV_007470 [Vitis vinifera])

HSP 1 Score: 325 bits (832), Expect = 1.06e-103
Identity = 172/306 (56.21%), Postives = 216/306 (70.59%), Query Frame = 0

Query: 53  KSLEINEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRAN 112
           K       S+ NS +N  +P   ++   YINIAPLP+F G SDECP THLSRF KVCRAN
Sbjct: 211 KGKSFRPSSSLNSSSNSLNPFXQSS---YINIAPLPIFRGSSDECPVTHLSRFTKVCRAN 270

Query: 113 NAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSEL 172
           N +SVE++MRIFPVTL GEA LWYDLNIEPY  +SWEE+KSSFL AY+++ L ++LRSEL
Sbjct: 271 NVSSVEMIMRIFPVTLDGEAALWYDLNIEPYSSLSWEEIKSSFLQAYHRJGLTDELRSEL 330

Query: 173 MTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSL 232
           M I+Q  EE+VRSYFLRLQ ILK+WP  + L DG L+ IF+DGLR++F++W+IPQKP SL
Sbjct: 331 MMINQGTEESVRSYFLRLQWILKRWPD-HGLPDGLLEGIFIDGLRKDFQDWIIPQKPSSL 390

Query: 233 NEALRLAFGLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKK----N 292
           NEALRLAF  E+V  IR   G R   CGFC G H+E  CE+RERMR LW   +K+    +
Sbjct: 391 NEALRLAFAWEKVQSIR---GGREKECGFCSGGHDEEGCEIRERMRXLWVKSKKQTRDYS 450

Query: 293 GGDMAESEGHNTAELVRSVSAISRNEAEVGKDGGE-MVGLKKKGQCQCWKHQCGMKKLDR 352
           G  + + +G    E   SV   SR+  +  ++G E  +G KKK QCQC KHQC  KKL+R
Sbjct: 451 GRIVNDEDGEKEFERRVSVGGESRBVGKNEEEGEEGXMGWKKKSQCQCGKHQCWKKKLER 509

BLAST of Csor.00g132210 vs. NCBI nr
Match: EXB78111.1 (hypothetical protein L484_004813 [Morus notabilis])

HSP 1 Score: 312 bits (800), Expect = 2.47e-100
Identity = 172/303 (56.77%), Postives = 205/303 (67.66%), Query Frame = 0

Query: 70  QSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIMMRIFPVTLQ 129
           Q P +      Y+NIA  P+F GGS+ECP  HLSRFAKVCRANN +S+++MM+IFPVTL+
Sbjct: 103 QQPVSQTGYNSYMNIAQFPIFRGGSEECPFAHLSRFAKVCRANNVSSIDMMMKIFPVTLE 162

Query: 130 GEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLR 189
            EA LWYDLN+EPY  +SWEE+KSSF  AY KIEL EQLRS+LMTI+Q   E+VRSYFLR
Sbjct: 163 DEAALWYDLNVEPYEELSWEEIKSSFYHAYGKIELTEQLRSQLMTINQGDAESVRSYFLR 222

Query: 190 LQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGLEQVTVIR 249
           LQ ILKKWP  + LSD  LK +F+DGLR +F+EWM PQKP SLN+ALRLAF  EQV  IR
Sbjct: 223 LQWILKKWPE-HGLSDDLLKGVFVDGLRGDFQEWMAPQKPGSLNKALRLAFCFEQVKSIR 282

Query: 250 TSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNG--------GDMAESEGHNTA 309
                  ++CGFC G HEE  CEVRERMR LW    K +G          + +SEG    
Sbjct: 283 NVRRNASVKCGFCGGLHEERGCEVRERMRELWLKSNKDDGLGKGMLERNLIEKSEG--VK 342

Query: 310 ELVRSVS-AISRNEAEVGK------DG----GEMVGLKKKGQCQCWKHQCGMKKLDRNLS 353
           EL RSVS A SR+   VGK      DG     E+   KK+ QCQC KHQC  K ++RN S
Sbjct: 343 ELGRSVSMATSRSTCVVGKNDQVEEDGKEEEDELGSKKKRSQCQCGKHQCWKKNIERNNS 402

BLAST of Csor.00g132210 vs. NCBI nr
Match: CAB4273215.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 309 bits (791), Expect = 1.05e-99
Identity = 162/291 (55.67%), Postives = 208/291 (71.48%), Query Frame = 0

Query: 68  NLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRAN-NAASVEIMMRIFPV 127
           N   P    T + YI IAPLP+F GGS+ECP THL+RFAK+CRAN +  +V++M+RIFPV
Sbjct: 71  NFSEPTTNQTPY-YIPIAPLPIFRGGSNECPVTHLTRFAKICRANFSCPTVDVMVRIFPV 130

Query: 128 TLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSY 187
           TL+ EA LWYDLNI+PYP +SWEE++S F  AY++I+   QLRSEL  I Q  +E VRSY
Sbjct: 131 TLENEAALWYDLNIDPYPSLSWEEIRSLFFQAYDQID---QLRSELTMIKQGRDETVRSY 190

Query: 188 FLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGLEQVT 247
           FLRLQ ILK+WP  + L D  LK +F+DGLR+EFK+W++ +KP SLN+ALRLAFG E+V 
Sbjct: 191 FLRLQWILKRWPD-HGLQDNVLKGVFIDGLRKEFKDWIVAEKPSSLNDALRLAFGFEKVK 250

Query: 248 VIR--TSGGKRFLRCGFCEGRHEELVCEVRERMRRLW-KSREKKNGGDMAESEGHNTAEL 307
            +R  T+  ++ + CGFC G HEE  CEVRERMR+LW KS+E          EG     L
Sbjct: 251 SVRATTAAKEKAVECGFCGGGHEEKGCEVRERMRKLWVKSKE----------EG-----L 310

Query: 308 VRSVSAISRNEAE--VGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSML 352
           VR VS + + E E    ++ GE+V LKKKGQCQCWKHQC  KKL+R+ S++
Sbjct: 311 VRMVSVVGKREEEGVEREEEGELVDLKKKGQCQCWKHQCWKKKLERSKSLV 341

BLAST of Csor.00g132210 vs. NCBI nr
Match: KAF3973300.1 (hypothetical protein CMV_003263 [Castanea mollissima])

HSP 1 Score: 311 bits (797), Expect = 2.39e-99
Identity = 176/333 (52.85%), Postives = 225/333 (67.57%), Query Frame = 0

Query: 57  INEESATNSP----------TNLQSPNAAATVFP-------------------YINIAPL 116
           I  ES TN+P           + QS N + T FP                   YINIAP 
Sbjct: 68  IGSESETNAPGDRFSSQLRDPDSQSVNLSTTAFPNSTSNFPKISQPPSTHLASYINIAPF 127

Query: 117 PVFHGGSDECPATHLSRFAKVCRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPIS 176
           P+FHG  +ECP  H+SRFAKVC ANN ++ ++MM IFPVTL+ EA LWYDLNI+PYP ++
Sbjct: 128 PIFHGNPNECPVKHVSRFAKVCVANNVSTTDMMMSIFPVTLEDEAALWYDLNIDPYPSLT 187

Query: 177 WEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGF 236
           WEE+KSSFL AY+KI++ +QLRSELM I+Q  EE+VRSYFLRLQ ILK+WP  + + DG 
Sbjct: 188 WEEIKSSFLHAYHKIQVVDQLRSELMMINQGDEESVRSYFLRLQWILKQWPD-HGIPDGL 247

Query: 237 LKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGLEQVTVIRTSGGKRFLRCGFCEGRHE 296
           LK +F+DGLREEF++W+ PQKPDSL+EALRLAF  EQV  IR    ++ L+CGFC+G HE
Sbjct: 248 LKGVFIDGLREEFRDWIFPQKPDSLHEALRLAFAFEQVKSIRAV--RKELKCGFCDGMHE 307

Query: 297 ELVCEVRERMRRLWK-SREKKNGGDMAESEGHNT---AELVRSVS---AISRNEAEVGKD 353
           E  CEVRERMR+LW+ S+EK+    +A+S   +     ELVRSVS   + S  +   G++
Sbjct: 308 ERDCEVRERMRKLWRESKEKEEPVVLAKSTRSDDDLGKELVRSVSIGASSSVGKNNEGEE 367

BLAST of Csor.00g132210 vs. ExPASy TrEMBL
Match: A0A7N2R9A7 (Retrotrans_gag domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.22e-104
Identity = 191/375 (50.93%), Postives = 246/375 (65.60%), Query Frame = 0

Query: 15  RNYATDYDASLSQSLDASNEDDYDASESNNFQTSGHKSKSLEINEESATNSP-------- 74
           R YA   D     SL  SNE+ Y+       + +   +    I+ ES TN+P        
Sbjct: 30  REYAYKDDNYSDASLSESNENGYEYE-----RPAKDDNDDAYISSESETNAPGDRFSSQL 89

Query: 75  --TNLQSPNAAATVFP-------------------YINIAPLPVFHGGSDECPATHLSRF 134
              + QS N + T FP                   Y+NIAP+P+FHG ++ECP  H+SRF
Sbjct: 90  RDPDSQSINLSTTAFPNSTSNFPKISQPPSTHLASYMNIAPIPIFHGNTNECPVKHVSRF 149

Query: 135 AKVCRANNAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELA 194
           AKVC ANN ++ ++MMRIFPVTL+ EA LWYDLNIEPYP ++WEE+KSSFL AY+KIE+ 
Sbjct: 150 AKVCVANNVSTTDMMMRIFPVTLEDEAALWYDLNIEPYPSLTWEEIKSSFLHAYHKIEVV 209

Query: 195 EQLRSELMTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMI 254
           +QLRSELM I+Q  EE+VRSYFLRLQ ILK+WP  + +SDG LK +F+DGLREEF+ W+I
Sbjct: 210 DQLRSELMMINQGDEESVRSYFLRLQWILKQWPD-HGISDGLLKGVFIDGLREEFRGWII 269

Query: 255 PQKPDSLNEALRLAFGLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWK-SR 314
           PQKPDSL+EALRLAFG EQV  IR    ++ L+CGFC+G HEE  CEVRERMR+LW+ S+
Sbjct: 270 PQKPDSLHEALRLAFGFEQVKSIRAV--RKELKCGFCDGMHEERDCEVRERMRKLWRESK 329

Query: 315 EKKNGGDMAESEGHNTA---ELVRSVS---AISRNEAEVGKDGGEMVGLKKKGQCQCWKH 353
           EK+    +A+S G +     ELVRSVS   + S  +   G++ G M G  KK Q Q  K+
Sbjct: 330 EKEEAVVLAKSTGGDDELGKELVRSVSIGASSSVGKNNEGEEAGFMDG--KKNQFQYGKY 389

BLAST of Csor.00g132210 vs. ExPASy TrEMBL
Match: A5C7E6 (Retrotrans_gag domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_007470 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 2.06e-103
Identity = 172/306 (56.21%), Postives = 215/306 (70.26%), Query Frame = 0

Query: 53  KSLEINEESATNSPTNLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRAN 112
           K       S+ NS +N  +P   ++   YINIAPLP+F G SDECP THLSRF KVCRAN
Sbjct: 211 KGKSFRPSSSLNSSSNSLNPFXQSS---YINIAPLPIFRGSSDECPVTHLSRFTKVCRAN 270

Query: 113 NAASVEIMMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSEL 172
           N +SVE++MRIFPVTL GEA LWYDLNIEPY  +SWEE+KSSFL AY++  L ++LRSEL
Sbjct: 271 NVSSVEMIMRIFPVTLDGEAALWYDLNIEPYSSLSWEEIKSSFLQAYHRXGLTDELRSEL 330

Query: 173 MTISQRPEENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSL 232
           M I+Q  EE+VRSYFLRLQ ILK+WP  + L DG L+ IF+DGLR++F++W+IPQKP SL
Sbjct: 331 MMINQGTEESVRSYFLRLQWILKRWPD-HGLPDGLLEGIFIDGLRKDFQDWIIPQKPSSL 390

Query: 233 NEALRLAFGLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKK----N 292
           NEALRLAF  E+V  IR   G R   CGFC G H+E  CE+RERMR LW   +K+    +
Sbjct: 391 NEALRLAFAWEKVQSIR---GGREKECGFCSGGHDEEGCEIRERMRXLWVKSKKQTRDYS 450

Query: 293 GGDMAESEGHNTAELVRSVSAISRNEAEVGKDGGE-MVGLKKKGQCQCWKHQCGMKKLDR 352
           G  + + +G    E   SV   SR+  +  ++G E  +G KKK QCQC KHQC  KKL+R
Sbjct: 451 GRIVNDEDGEKEFERRVSVGGESRBVGKNEEEGEEGXMGWKKKSQCQCGKHQCWKKKLER 509

BLAST of Csor.00g132210 vs. ExPASy TrEMBL
Match: W9R9S0 (Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_004813 PE=4 SV=1)

HSP 1 Score: 312 bits (800), Expect = 1.19e-100
Identity = 172/303 (56.77%), Postives = 205/303 (67.66%), Query Frame = 0

Query: 70  QSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEIMMRIFPVTLQ 129
           Q P +      Y+NIA  P+F GGS+ECP  HLSRFAKVCRANN +S+++MM+IFPVTL+
Sbjct: 103 QQPVSQTGYNSYMNIAQFPIFRGGSEECPFAHLSRFAKVCRANNVSSIDMMMKIFPVTLE 162

Query: 130 GEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSYFLR 189
            EA LWYDLN+EPY  +SWEE+KSSF  AY KIEL EQLRS+LMTI+Q   E+VRSYFLR
Sbjct: 163 DEAALWYDLNVEPYEELSWEEIKSSFYHAYGKIELTEQLRSQLMTINQGDAESVRSYFLR 222

Query: 190 LQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGLEQVTVIR 249
           LQ ILKKWP  + LSD  LK +F+DGLR +F+EWM PQKP SLN+ALRLAF  EQV  IR
Sbjct: 223 LQWILKKWPE-HGLSDDLLKGVFVDGLRGDFQEWMAPQKPGSLNKALRLAFCFEQVKSIR 282

Query: 250 TSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNG--------GDMAESEGHNTA 309
                  ++CGFC G HEE  CEVRERMR LW    K +G          + +SEG    
Sbjct: 283 NVRRNASVKCGFCGGLHEERGCEVRERMRELWLKSNKDDGLGKGMLERNLIEKSEG--VK 342

Query: 310 ELVRSVS-AISRNEAEVGK------DG----GEMVGLKKKGQCQCWKHQCGMKKLDRNLS 353
           EL RSVS A SR+   VGK      DG     E+   KK+ QCQC KHQC  K ++RN S
Sbjct: 343 ELGRSVSMATSRSTCVVGKNDQVEEDGKEEEDELGSKKKRSQCQCGKHQCWKKNIERNNS 402

BLAST of Csor.00g132210 vs. ExPASy TrEMBL
Match: A0A6J5UDI4 (Retrotrans_gag domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20487 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 5.06e-100
Identity = 162/291 (55.67%), Postives = 208/291 (71.48%), Query Frame = 0

Query: 68  NLQSPNAAATVFPYINIAPLPVFHGGSDECPATHLSRFAKVCRAN-NAASVEIMMRIFPV 127
           N   P    T + YI IAPLP+F GGS+ECP THL+RFAK+CRAN +  +V++M+RIFPV
Sbjct: 71  NFSEPTTNQTPY-YIPIAPLPIFRGGSNECPVTHLTRFAKICRANFSCPTVDVMVRIFPV 130

Query: 128 TLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRPEENVRSY 187
           TL+ EA LWYDLNI+PYP +SWEE++S F  AY++I+   QLRSEL  I Q  +E VRSY
Sbjct: 131 TLENEAALWYDLNIDPYPSLSWEEIRSLFFQAYDQID---QLRSELTMIKQGRDETVRSY 190

Query: 188 FLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLAFGLEQVT 247
           FLRLQ ILK+WP  + L D  LK +F+DGLR+EFK+W++ +KP SLN+ALRLAFG E+V 
Sbjct: 191 FLRLQWILKRWPD-HGLQDNVLKGVFIDGLRKEFKDWIVAEKPSSLNDALRLAFGFEKVK 250

Query: 248 VIR--TSGGKRFLRCGFCEGRHEELVCEVRERMRRLW-KSREKKNGGDMAESEGHNTAEL 307
            +R  T+  ++ + CGFC G HEE  CEVRERMR+LW KS+E          EG     L
Sbjct: 251 SVRATTAAKEKAVECGFCGGGHEEKGCEVRERMRKLWVKSKE----------EG-----L 310

Query: 308 VRSVSAISRNEAE--VGKDGGEMVGLKKKGQCQCWKHQCGMKKLDRNLSML 352
           VR VS + + E E    ++ GE+V LKKKGQCQCWKHQC  KKL+R+ S++
Sbjct: 311 VRMVSVVGKREEEGVEREEEGELVDLKKKGQCQCWKHQCWKKKLERSKSLV 341

BLAST of Csor.00g132210 vs. ExPASy TrEMBL
Match: A0A061DJI4 (Retrotrans_gag domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_001704 PE=4 SV=1)

HSP 1 Score: 306 bits (785), Expect = 2.05e-98
Identity = 181/360 (50.28%), Postives = 229/360 (63.61%), Query Frame = 0

Query: 24  SLSQSLDASNEDDYDASESNN----FQTSGHKSKSLEINEESATNSPTNLQSPN---AAA 83
           SLS S D SN DD +   + N    F  S  +S+S+     +A N+P  L   N   AAA
Sbjct: 47  SLSHSPDESNGDDLEQPRNENDYDDFDASDFQSESM----TNAPNAPKTLLRGNGLSAAA 106

Query: 84  TV-----------------FPYINIAPLPVFHGGSDECPATHLSRFAKVCRANNAASVEI 143
           ++                   YINIAPLP+F G   +CP THLSRFAKVCRANN +SV++
Sbjct: 107 SLNSVSNSAIWSRSNLIEATSYINIAPLPIFQGSPSDCPVTHLSRFAKVCRANNVSSVDM 166

Query: 144 MMRIFPVTLQGEALLWYDLNIEPYPPISWEELKSSFLDAYNKIELAEQLRSELMTISQRP 203
           MMRIFPVTL+ EA LWYDLNIEPYP + WEE+KSSFL AY+K ++ EQLR ELM I+Q  
Sbjct: 167 MMRIFPVTLENEAGLWYDLNIEPYPSLRWEEIKSSFLQAYHKTQVTEQLRHELMMINQGS 226

Query: 204 EENVRSYFLRLQLILKKWPPGNELSDGFLKAIFMDGLREEFKEWMIPQKPDSLNEALRLA 263
           EE VRSYFLRLQ  L++WP  + + +  LK IF+DGLRE+F++W++PQKPDSL EALRLA
Sbjct: 227 EERVRSYFLRLQWSLQRWPD-HGIPENLLKEIFVDGLREDFQDWIVPQKPDSLVEALRLA 286

Query: 264 FGLEQVTVIRTSGGKRFLRCGFCEGRHEELVCEVRERMRRLWKSREKKNGGDMAESEGHN 323
              EQ+  I+ S  K+ L+C FCEG HEE  C+VRERM+ LW+  + K   D +E    N
Sbjct: 287 IAFEQLKSIKISR-KKDLKCDFCEGSHEERNCQVRERMKELWRKTKDKEWMDSSEKNQSN 346

Query: 324 TAELVRSV-SAISRNEAEVGKDGGEMVGLK--KKGQCQCWKHQCGMKKLDRNLSMLSKTS 356
            A    +  SA  R E E   +G  + G K  KK  CQC KHQC  K+LDR  S++S+ S
Sbjct: 347 EAVNESAEGSAEDRIEEENVVEGEMLSGRKQKKKSPCQCCKHQCWKKQLDRTNSLVSRNS 400

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6604769.12.13e-259100.00hypothetical protein SDJN03_02086, partial [Cucurbita argyrosperma subsp. sorori... [more]
CAN62167.11.06e-10356.21hypothetical protein VITISV_007470 [Vitis vinifera][more]
EXB78111.12.47e-10056.77hypothetical protein L484_004813 [Morus notabilis][more]
CAB4273215.11.05e-9955.67unnamed protein product [Prunus armeniaca][more]
KAF3973300.12.39e-9952.85hypothetical protein CMV_003263 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
A0A7N2R9A71.22e-10450.93Retrotrans_gag domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A5C7E62.06e-10356.21Retrotrans_gag domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_00... [more]
W9R9S01.19e-10056.77Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_00... [more]
A0A6J5UDI45.06e-10055.67Retrotrans_gag domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_... [more]
A0A061DJI42.05e-9850.28Retrotrans_gag domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_00170... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 123..218
e-value: 1.2E-9
score: 38.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availablePANTHERPTHR33223FAMILY NOT NAMEDcoord: 30..352

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g132210.m01Csor.00g132210.m01mRNA