Csor.00g132160 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGGCCAATTCTTGCTGCTGCAGGCGGCGGCGGCGGCTTCCAAGATGTCACCTTGGTGAGCTCCGGCGGGCTGTTTTTGCTTTCAGCCATCCTTCTATCTATCTCTCTCGTATCAATGATCATATTTGCTTGCGGCAACTCTAATGACCCTAAAAGAAAGGACGGCGGTGGAGGTTGTGGTGGCGGTGATGGTGGCGGAGGTGGTGGCTGTGGTGGAGGCTGTGGTGGCTGTGGAGGTTGA ATGGGCAGGCCAATTCTTGCTGCTGCAGGCGGCGGCGGCGGCTTCCAAGATGTCACCTTGGTGAGCTCCGGCGGGCTGTTTTTGCTTTCAGCCATCCTTCTATCTATCTCTCTCGTATCAATGATCATATTTGCTTGCGGCAACTCTAATGACCCTAAAAGAAAGGACGGCGGTGGAGGTTGTGGTGGCGGTGATGGTGGCGGAGGTGGTGGCTGTGGTGGAGGCTGTGGTGGCTGTGGAGGTTGA ATGGGCAGGCCAATTCTTGCTGCTGCAGGCGGCGGCGGCGGCTTCCAAGATGTCACCTTGGTGAGCTCCGGCGGGCTGTTTTTGCTTTCAGCCATCCTTCTATCTATCTCTCTCGTATCAATGATCATATTTGCTTGCGGCAACTCTAATGACCCTAAAAGAAAGGACGGCGGTGGAGGTTGTGGTGGCGGTGATGGTGGCGGAGGTGGTGGCTGTGGTGGAGGCTGTGGTGGCTGTGGAGGTTGA MGRPILAAAGGGGGFQDVTLVSSGGLFLLSAILLSISLVSMIIFACGNSNDPKRKDGGGGCGGGDGGGGGGCGGGCGGCGG Homology
BLAST of Csor.00g132160 vs. NCBI nr
Match: KAG6604774.1 (hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137 bits (346), Expect = 1.91e-40 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g132160 vs. NCBI nr
Match: KAG6603228.1 (hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.6 bits (187), Expect = 6.00e-16 Identity = 62/89 (69.66%), Postives = 67/89 (75.28%), Query Frame = 0
BLAST of Csor.00g132160 vs. NCBI nr
Match: KAG6603229.1 (hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 72.8 bits (177), Expect = 9.28e-15 Identity = 54/77 (70.13%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Csor.00g132160 vs. NCBI nr
Match: XP_034695771.1 (glycine-rich protein 5-like [Vitis riparia]) HSP 1 Score: 62.4 bits (150), Expect = 1.93e-10 Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0
BLAST of Csor.00g132160 vs. NCBI nr
Match: KAG6604775.1 (hypothetical protein SDJN03_02092, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 57.4 bits (137), Expect = 1.51e-08 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of Csor.00g132160 vs. ExPASy TrEMBL
Match: A0A5N5GBC1 (Loricrin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_034934 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 3.01e-08 Identity = 46/92 (50.00%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of Csor.00g132160 vs. ExPASy TrEMBL
Match: A0A0A0LJD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062640 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.80e-07 Identity = 34/58 (58.62%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of Csor.00g132160 vs. ExPASy TrEMBL
Match: F6GYM8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0054g00570 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.16e-07 Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Csor.00g132160 vs. ExPASy TrEMBL
Match: A0A540LEY3 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_029325 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.20e-06 Identity = 43/92 (46.74%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of Csor.00g132160 vs. ExPASy TrEMBL
Match: M5WY52 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G116900 PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.01e-06 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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