Csor.00g130530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g130530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 1185001 .. 1187163 (+)
RNA-Seq ExpressionCsor.00g130530
SyntenyCsor.00g130530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCAAATGGCGTTCAGAAAACCCATCATAAACCTCCCTTTCGCCGCCTTATCAGCCGTTTACTGCCGTGTCGGAGCCGGAATATTCGGTTACGGCCCGCTTCAGACGTCCTCTCGCCGGCGAGGAATTGTAAGCTTTCTTGCGAAGGGGATTGTTTTTCTTATTTGCTAATCCACCGAAACACGTGTAAAAAACAGAGAGATTGAGTTGAAGAAATGCCTACACGTGTAAAAAATAATATAATTTTTAAAAATTTTAAATTTTAAAAAATTTAAAAAATTATTTATTAAACAATTTGGAGGATTATTCAACAACTGTCCAAATATTACACTTTTCTATTTATTATTTATTTAATGAATTATTAAAATTAGCACATGGATTGTTCTAATTTGAATACTGAAATAATTTTCTCAAAAAGCGCAAGATGACGTCAGATTGTGAGAAACGTGGCGAATTTTAAGGTCTCCACGTTGGCGAACATTAGAAGACCATAACTATGGGTGGGGCCAGCTCGATAACTGTCAAATAACGGTAATAAGGAAGTTATTGCCTCGTAGCAAACGTGTCATTTTCCCTTTTTTTATTTTTTTTTCTTATTTCTTTCTTAAAATATTTTTAAATAAAAAATTGTAAATTTAATTTTTAAAAATTTAAATGTAAATATTTCTCCTCTAAGATTAATTAAAATTGTCATATATAAATAATGTTTTTTATTTATAAAATTAAAATTCTCGATGATGTCATATTGTGATTTTGACCTAGATAGGAGTAACCATCTTGGTTAAAGGAAATCAAACGATAGCGACGTGACTCCAACAAGTACGTGTAAACCTAAATCTAATGATAATGTCTTTTTCTTGCTACGACATTTAGTGATTCTTCGATGAGTGTTGCAGTTGTTAATGATCGAGTAGTTCAATTGACAAATGATTAAAGTTATCAACGATTAATTCGATGAAACACAAAGTTGTTGTTGTTGACACGAGAACAAGAAGTGAGTTGCATATAAATCGACGTTGTAGCATAAAGTACAAACGTGATGTCATTTTATATAATAATCAAATAATCTCATTGTATTGGCGACGTAGTTGGTTTTGTTAGTTTCTATTACATTAATAAAAACAATACAATAATGTTCGAGACTTGATACTTCTACAACTACTGTAGCCCATCGTGCAACGTTTATCCATCGTAGGTGCAACGTTGCTCATGGTCACCTACACCCACATCCTCCACATGTCTCAAGCTAATGTTCAACGTGCAATGTCAAATCTCGCAACCCTATATCAACTATAAGTCGTCAAATTTGTCGATTTACTACTAACGAATGTTTGAGCATCGTCAAATTTTGTGTATGACTCACATACCAAAAAAACTCTGTTGTGAAACTCCACAAAACCGACCAAATAACGAGTCCCCATACGACTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAACAAGAGACTTATTCATCGTTCACTTATTTCCAGTTCTTCACCGTCTACACCATGTGAGATAGTTGTACATGACGTGTTAAAAAATGCACTAGAAGTTTATTTTTATCACTTCAATGTAATTTTTCATTATGTTAGTAATTATAAGCGTATTTTTTTTTCAATAAACTTTAAATATCATGAATTTTAATATATATATTTTAAAGTTTAAATACATAATTAAGAAAGTTTGGGGATTTTTTTATTTTTTTTATAATTTTGGAAATACAGGTGGCAGTTTTGAAGGGGTTTTCCGACGTCGGCGGCGGAGCAAGGCGGTGGGAGGTGGTATAATCTTGTGGAAGTCACCATCACCGGCGTGCAGACAAAATGTTTAAGCTCATTATGTCACCATCATACAAGAAATTAAATAAATAAAAATTATATTTTTCATGAAAATAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAATTACTTTCCAAAGCAAGCACACTGTACTATAATAGGAAGATTAGTTCCCGTTTCCTGTTCTACGTTCTCTTCGTCCCCCTAGGGCTTGCCCATTAATTTCCCCCTTCTCCATTCCTTCAGGGGACATCTTTGTTATGTAATTCTCAATCTTGAACTCAGATTTCAAACGCTGGGAAAGGCTTCAATCCAATCACCGGCGTTTCTCCGATTTCTCCTTGA

mRNA sequence

ATGCTCCAAATGGCGTTCAGAAAACCCATCATAAACCTCCCTTTCGCCGCCTTATCAGCCGTTTACTGCCGTGTCGGAGCCGGAATATTCGGTTACGGCCCGCTTCAGACGTCCTCTCGCCGGCGAGGAATTGTGGCAGTTTTGAAGGGGTTTTCCGACGTCGGCGGCGGAGCAAGGCGGTGGGAGGTGATTTCAAACGCTGGGAAAGGCTTCAATCCAATCACCGGCGTTTCTCCGATTTCTCCTTGA

Coding sequence (CDS)

ATGCTCCAAATGGCGTTCAGAAAACCCATCATAAACCTCCCTTTCGCCGCCTTATCAGCCGTTTACTGCCGTGTCGGAGCCGGAATATTCGGTTACGGCCCGCTTCAGACGTCCTCTCGCCGGCGAGGAATTGTGGCAGTTTTGAAGGGGTTTTCCGACGTCGGCGGCGGAGCAAGGCGGTGGGAGGTGATTTCAAACGCTGGGAAAGGCTTCAATCCAATCACCGGCGTTTCTCCGATTTCTCCTTGA

Protein sequence

MLQMAFRKPIINLPFAALSAVYCRVGAGIFGYGPLQTSSRRRGIVAVLKGFSDVGGGARRWEVISNAGKGFNPITGVSPISP
Homology
[Close]
BLAST of Csor.00g130530 vs. NCBI nr
Match: KAG6604935.1 (hypothetical protein SDJN03_02252, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027013.1 hypothetical protein SDJN02_11021, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165 bits (417), Expect = 3.01e-51
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MLQMAFRKPIINLPFAALSAVYCRVGAGIFGYGPLQTSSRRRGIVAVLKGFSDVGGGARR 60
          MLQMAFRKPIINLPFAALSAVYCRVGAGIFGYGPLQTSSRRRGIVAVLKGFSDVGGGARR
Sbjct: 1  MLQMAFRKPIINLPFAALSAVYCRVGAGIFGYGPLQTSSRRRGIVAVLKGFSDVGGGARR 60

Query: 61 WEVISNAGKGFNPITGVSPISP 82
          WEVISNAGKGFNPITGVSPISP
Sbjct: 61 WEVISNAGKGFNPITGVSPISP 82

The following BLAST results are available for this feature:
BLAST of Csor.00g130530 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g130530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604935.13.01e-51100.00hypothetical protein SDJN03_02252, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g130530 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g130530 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g130530.m01Csor.00g130530.m01mRNA