Csor.00g130430 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g130430
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pre-mRNA-splicing factor SYF2
Location	Csor_Chr02: 1235915 .. 1240426 (-)
RNA-Seq Expression	Csor.00g130430
Synteny	Csor.00g130430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCAGTTGCCGTGGGTACAGCCCTTTTCGAGAGACCCTTCTAATGGGCCTAAAGCCCATCAATTTCAACCCGAATGTACTATTCAACTTTCTTTTATAAATTATAAGCTAAATTAATCATAGTTTTCAATTTGGTCCCTATAAATTTTAGAATTACAATTTAGTTCTTCAAATTGTTCTAATAATTCTAATTAGTTGAGAGAAAATTTTTCATTTTATTTTTTATGTCAATAATAAAATATGATTAATTTAATGGATCGCGATGTTGTACCACACTATTCTTAGAGATTAAAATAACGGTTCATTTATTTATCTTAGATAACTAAACATCTTGTTGATCATATCAGAATTATGTTGACACTGGTACTGGAGTTAGGGGAGGGGACGAGGAAGGAGGCAGGGTCGGGGTCATAGGTGAAAAGGAGGTGGAGGAAGAGGGAAAATGAGAGAGTTTTTTTTTTTTTTTTTTCCTTAAAAAAAAATGAAAACTAAATATTAATTTTAATTTTAAAACTAGTTTTTTATTTTAAAAAAATTGCACTTTAGCCCTCCATTAAATAACTATTTAATAAAGGGTTTGATTGCCTAATTATAAAACATAGAGACGAAATAAAGCAATTTTTTAATTTCAACAACCAAAAAATAGTTTACGAAATAGTAAAAAATGACAATGATTATTTTAATTTTGATTTTAAAAAAATAAATGACAGAGAGGATGATTAAATATATGTATTTAAATAATAATAATAAAAATAAATAAATAAATAAAATATATGTTTCTATTATTCCTAATTAGAAACCAAAATTAATTTTGTACTTAAATTTTAGAGAATTTTATTAATAGGATTTGTTGTTTCGGAAGAAATCTTGAGCAATTGTTCTTCGTTCTTCCCAAATCGGGAACGGAACCTCTTCTGCTTTCTTCTTCGAGTTCTTCCCGCGCGGAAAACCTAGATTTCAGGTATAGTTCTGCATCTTGCTTTTAGCGCCTCTAAATCTCTAATATTGCTTTTCTCGTTGTGATTCCGGATGAATTTCGGTTTTGATTCGCAAGTTTTGTCTGGAATCAGTGATAATGTTCATGCTGCTATTTGTTGTTGTGTGTTGTAGTAGACTTGATTTTGTTGTAGTTTGCTCCGGAATTGATTAATTGATTGTACTCCTTCGAATTCCTCTTGTGAAAAACAAAGACATGCAAGGAAAATCAATTTTCCATTGAGTACACTTCGCGCGCATTGTATACATTCGGAGAAATTGAGGATTGTTGTTGGCGTTGGTACGATAAATTAAGTTGGAAGTTTGAATGTTTTGACTCGTTTGATTGATCGTGTAACCTTCGTATTCATCCAATGATGCCTTTTATTGTCAAAATTTTCTTTTACAGCTTTAAGTTTCCGGAATTTTTGTATATTTTAAAGCTCCGTTTAATTATGACTCTTTATTTGCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCGGCAAAATGAGCCAGGTTTTTTCACATGCTACAATTTCTTTGCAACTCCCTTGAACATAATGACCTTCTCGTATTGTAGCTGACAATTTCATTATTCATCACTATTTATCCTTTTGTCTAATTTGTTAACGTTTTCTTTGAATTACGTAGCTTTTTTAACATTGCTAAAAATTGGCCCTATAAATTGCTTAACCATTCCTCCTCCACCTTTCAAATTCAAGTGATATCATTTGTTACCTTTCTCTCTGATCTCATGTAGATGTTTTCTTGTGAATTTTGATCACAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAACCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGGTAATTTTCTACATTTTCCAAAAGTAGTTAACAATTCCTATCAAGTATCAAGTAATGACTTATGGATCCATTGATGCAGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATCTGTACTACAAATTTACACTATGGTGATCTTAGCTGCTTTTTTATGGACAAATACATTTTTTAATAATTTGACTAGATTCCTTAATTTGCTAGTTGATGACGAACACATGATTTGATCTAGGGTATAGATATTGTGAATTTGATTGTGAATTGAAAAAACTTCGTACTTAATGTACTGGTGTTTCTCACTGTATAAAGAAGCTATTTAAGTGTTTGTTTAATTATGAATCGTGTTATATCCCAAAGTAATCACATTTTTGGGGGGAGGACTTAGATATAAAGTTTGCTTAATTGGTTGTATTTTATCTATTTGTTGTTAATATGTAAATACTTATCTAAAAGGGTTAAACTGCTTTGGTTTTAACAGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAGAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGTACTCTTAGTTCCACTGTATAATTTCGACCATATGTGTAATTATCAGATTTCTGAGGATATAGATCTTGTGTCACTATCCTGCAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAAGGTATTTTGTTTAGATGAGGCTCTGGCTCAATTATACATGCATGCATGCATACATTCTTTTTACTCTTGCCCACCTTTCTCTGCTATGTGCTGAATATACTTCTTCACGAGGAGAGACAAGATGTGAGATCCCACATCGGTTGGAGAGGGGAGAGTAGAACAAAGCATTCTTTAAAAGGGTGTGGAAACCTCTTTCTAGTAGACGTGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCAGTGGACCGGCCGTTACGTGTATTCTATGCTATGCTGAACTTACATATTTCTTTGTAAGCATGGCTTGGTGCACTTGATTAAATTTTATTTCGTGTTTTCCATTGTTTTTTCGTGTAGGCTTTTGGAATTCAAGTAGTTGGGAGGTATTTAAAGCAGCAGATTTGTACGCAAAGCTATAGAAAAGTGATTGTAAGTGATTTTGTTTTTAATATGACTATGAATTCACATTAGAAAAGAATTCTCTCCTATTTTATTTTGTCTTGCAATTAAAGAAAAGTTGTTTTCTTCCTTTATAGAAGTTTGTTCTATTTATCTCTGATTTTAACCGCTATCTTTAAAATTTCTCTTAAATATTTCTAAATTTTTATCTTCAGTAACTTTTGTCTACCGTCTTCTAATTTTTTTTTTTTTTTAATCTCAAATATAAGACTCTTTTTAAATGGGATGATTCTAAAACTACTTTTGTAAATAAACATTAATCATTTTAAAATGTTTTAAAATCGTTTTTACAAGTGCGGCATTAAATATCAATAGAAATGATTTATAACTAAACATTTTTACAAAATTAATTACTATTAAATCGCTTAATTGAAAACATTTAGGCTTATTCATTTACCAAGGAAAAAACATTTAAATATACTGTAACCCAACATTATAGCATTTCAACATTAGTAATGTGTCACAATCGCTTTTTCTCGAGACTTTGCAAAGCATTTTCGTGATACTCACTCTCACCAACGATCAAGTTAGTGAACTCAAATTTATGTCACAGTTGGTATGGACGATATATGCTAAAGTCTTATCTTAGTTCTGTTAATCAACATTGATAGCATTGATAGCATATAATCTCTTAATGCTAAAAACATTAATGTATAGCACATTTTGTGATAGATATTATAATAATAAAATAATACAAAATAAAAACGATAAAATAATATTAAAATAGAAGTAGACAATGATTTGACATGACATTCAACAACTATGACATGTCTTGAATAGGCATAA

mRNA sequence

ATGGGCCAGTTGCCGTGGAATTATGTTGACACTGGTACTGGAGTTAGGGGAGGGGACGAGGAAGGAGGCAGGGTCGGGGTCATAGCAATTGTTCTTCGTTCTTCCCAAATCGGGAACGGAACCTCTTCTGCTTTCTTCTTCGAGTTCTTCCCGCGCGGAAAACCTAGATTTCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCGGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAACCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAGAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAAGGCTTTTGGAATTCAAGTAGTTGGGAGGTATTTAAAGCAGCAGATTTGTACGCAAAGCTATAGAAAAGTGATTGCATAA

Coding sequence (CDS)

ATGGGCCAGTTGCCGTGGAATTATGTTGACACTGGTACTGGAGTTAGGGGAGGGGACGAGGAAGGAGGCAGGGTCGGGGTCATAGCAATTGTTCTTCGTTCTTCCCAAATCGGGAACGGAACCTCTTCTGCTTTCTTCTTCGAGTTCTTCCCGCGCGGAAAACCTAGATTTCAGCGAGTAAGAGACGTTGTTGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCGGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAACCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAATAGAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGACCGGGAGGAGAAGCGAAAATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAAGGCTTTTGGAATTCAAGTAGTTGGGAGGTATTTAAAGCAGCAGATTTGTACGCAAAGCTATAGAAAAGTGATTGCATAA

Protein sequence

MGQLPWNYVDTGTGVRGGDEEGGRVGVIAIVLRSSQIGNGTSSAFFFEFFPRGKPRFQRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSSGPLVDILWRSKTILSEELHCLIKAFGIQVVGRYLKQQICTQSYRKVIA

Homology

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BLAST of Csor.00g130430 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.7e-08
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 0


Query: 165 KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 224
           K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 225 LLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNV 284
              ANG+D  +A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQLRQ-YQRLTKQIKP 145

Query: 285 DLEEYNRMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRK 331
           D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+
Sbjct: 146 DMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKRE 191

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BLAST of Csor.00g130430 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-07
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 0


Query: 165 KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 224
           K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 225 LLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNV 284
              ANG+D  +A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQLRQ-YQRLTKQIKP 154

Query: 285 DLEEYNRMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRK 331
           D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+
Sbjct: 155 DMEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKRE 200

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BLAST of Csor.00g130430 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-06
Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 0


Query: 169 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 228
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 229 NGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEY 288
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQ-YHRLTKQIKPDMESY 151

Query: 289 NRMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKR 330
            R +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKR 192

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BLAST of Csor.00g130430 vs. ExPASy Swiss-Prot
Match: Q4QRB2 (Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.7e-06
Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 0


Query: 169 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 228
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 229 NGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEY 288
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQ-YHRLTKQIKPDMESY 151

Query: 289 NRMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKR 330
            R +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKR 192

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BLAST of Csor.00g130430 vs. ExPASy Swiss-Prot
Match: Q6DGP2 (Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 50/165 (30.30%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 169 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQKWLEDRKKKIGKLLD 228
           R +K  EL  K NEARK N   +  E K+++ PS     +   + + L D+KKK      
Sbjct: 28  RLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNWEAKKARLEYELLVDQKKK-ECAER 87

Query: 229 ANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEY 288
               D  K   +  ++A   + KK +++P P G+  + +  L   Y++ TK +  D+E Y
Sbjct: 88  GEDYDRVKLLEISAEDAERWERKKKKRNPDP-GFSGYAEAQLRQ-YQRLTKQIKPDMENY 147

Query: 289 NRMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKR 330
            + KE    +F+  ++SL YG     S+D I+ MV +++ + EKR
Sbjct: 148 EKQKEECGEDFHPTSNSLIYGTHVP-SKDSINRMVDDVEKQIEKR 188

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BLAST of Csor.00g130430 vs. NCBI nr
Match: KAG6604945.1 (hypothetical protein SDJN03_02262, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 757 bits (1955), Expect = 7.06e-276
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MGQLPWNYVDTGTGVRGGDEEGGRVGVIAIVLRSSQIGNGTSSAFFFEFFPRGKPRFQRV 60
           MGQLPWNYVDTGTGVRGGDEEGGRVGVIAIVLRSSQIGNGTSSAFFFEFFPRGKPRFQRV
Sbjct: 1   MGQLPWNYVDTGTGVRGGDEEGGRVGVIAIVLRSSQIGNGTSSAFFFEFFPRGKPRFQRV 60

Query: 61  RDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRS 120
           RDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRS
Sbjct: 61  RDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRS 120

Query: 121 SGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKM 180
           SGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKM
Sbjct: 121 SGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKM 180

Query: 181 NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ 240
           NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ
Sbjct: 181 NEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQ 240

Query: 241 EAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREAS 300
           EAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREAS
Sbjct: 241 EAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREAS 300

Query: 301 SLQYGKAPKISEDKIDNMVKELKDREEKRKSSGPLVDILWRSKTILSEELHCLIKAFGIQ 360
           SLQYGKAPKISEDKIDNMVKELKDREEKRKSSGPLVDILWRSKTILSEELHCLIKAFGIQ
Sbjct: 301 SLQYGKAPKISEDKIDNMVKELKDREEKRKSSGPLVDILWRSKTILSEELHCLIKAFGIQ 360

Query: 361 VVGRYLKQQICTQSYRKVIA 380
           VVGRYLKQQICTQSYRKVIA
Sbjct: 361 VVGRYLKQQICTQSYRKVIA 380

[Close]

BLAST of Csor.00g130430 vs. NCBI nr
Match: KAG7027023.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 538 bits (1387), Expect = 3.59e-190
Identity = 271/274 (98.91%), Postives = 273/274 (99.64%), Query Frame = 0


Query: 58  QRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQA 117
           QRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARN+QNEPVATSSEAVQA
Sbjct: 6   QRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQA 65

Query: 118 GRSSGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELR 177
           GRSS PSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELR
Sbjct: 66  GRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELR 125

Query: 178 LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYML 237
           LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYML
Sbjct: 126 LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYML 185

Query: 238 DTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYR 297
           DTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+MKESDPEFYR
Sbjct: 186 DTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYR 245

Query: 298 EASSLQYGKAPKISEDKIDNMVKELKDREEKRKS 331
           EASSLQYGKAPKISEDKIDNMVKELKDREEKRKS
Sbjct: 246 EASSLQYGKAPKISEDKIDNMVKELKDREEKRKS 279

[Close]

BLAST of Csor.00g130430 vs. NCBI nr
Match: XP_023532640.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534 bits (1375), Expect = 2.41e-188
Identity = 269/274 (98.18%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 58  QRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQA 117
           QRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARN+QNEPVATSSEAVQA
Sbjct: 6   QRVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQA 65

Query: 118 GRSSGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELR 177
           GRSS PSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKLTGRKKKLFELR
Sbjct: 66  GRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGEENVEGDFTKLTGRKKKLFELR 125

Query: 178 LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYML 237
           LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYML
Sbjct: 126 LKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEERKKKIGKLLDANGLDMTKAYML 185

Query: 238 DTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYR 297
           DTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+MKESDPEFYR
Sbjct: 186 DTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYR 245

Query: 298 EASSLQYGKAPKISEDKIDNMVKELKDREEKRKS 331
           EASSLQYGKAPKISEDKIDNMVKELKDREEKRKS
Sbjct: 246 EASSLQYGKAPKISEDKIDNMVKELKDREEKRKS 279

[Close]

BLAST of Csor.00g130430 vs. NCBI nr
Match: KAG6571016.1 (hypothetical protein SDJN03_29931, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 539 bits (1389), Expect = 9.35e-183
Identity = 276/307 (89.90%), Postives = 285/307 (92.83%), Query Frame = 0


Query: 52  RGKPRFQ---RVRDVVAEMSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPV 111
           R  P FQ    VR+VVA+MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARN+QNEPV
Sbjct: 497 RRSPSFQCVVGVREVVAKMSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPV 556

Query: 112 ATSSEAVQAGRSSGPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTG 171
            TSSE VQAGRSSG SNF PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTG
Sbjct: 557 PTSSEGVQAGRSSGSSNFMPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTG 616

Query: 172 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANG 231
           RKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANG
Sbjct: 617 RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANG 676

Query: 232 LDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRM 291
           LDM+KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+M
Sbjct: 677 LDMSKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKM 736

Query: 292 KESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSSGPLVDILWRSKTILSE 351
           KESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKS       LWRSKTILSE
Sbjct: 737 KESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFS---HTLWRSKTILSE 796

Query: 352 ELHCLIK 355
           ELH LIK
Sbjct: 797 ELHYLIK 800

[Close]

BLAST of Csor.00g130430 vs. NCBI nr
Match: XP_022947463.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 519 bits (1336), Expect = 1.24e-182
Identity = 261/265 (98.49%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNF 126
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARN+QNEPVATSSEAVQAGRSS PSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 127 APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 186
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 187 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 246
           NQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 247 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGK 306
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+MKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 307 APKISEDKIDNMVKELKDREEKRKS 331
           APKISEDKIDNMVKELKDREEKRKS
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKS 265

[Close]

BLAST of Csor.00g130430 vs. ExPASy TrEMBL
Match: A0A6J1G6N2 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111451319 PE=3 SV=1)

HSP 1 Score: 519 bits (1336), Expect = 6.02e-183
Identity = 261/265 (98.49%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNF 126
           MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARN+QNEPVATSSEAVQAGRSS PSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNF 60

Query: 127 APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 186
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 187 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 246
           NQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 247 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGK 306
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+MKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 307 APKISEDKIDNMVKELKDREEKRKS 331
           APKISEDKIDNMVKELKDREEKRKS
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKS 265

[Close]

BLAST of Csor.00g130430 vs. ExPASy TrEMBL
Match: A0A6J1I290 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111469841 PE=3 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 9.46e-180
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNF 126
           MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA N++NEPVATSSEAVQAGRSS P NF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKIIAEVKALNQKNEPVATSSEAVQAGRSSAPFNF 60

Query: 127 APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 186
           APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA
Sbjct: 61  APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 120

Query: 187 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 246
           NQTAIAAEKKKMEPP+ESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPTESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 180

Query: 247 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGK 306
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVD+EEYN+MKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDIEEYNKMKESDPEFYREASSLQYGK 240

Query: 307 APKISEDKIDNMVKELKDREEKRKS 331
           APKISEDKIDNMVKELKDREEKRKS
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKS 265

[Close]

BLAST of Csor.00g130430 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 503 bits (1295), Expect = 1.04e-176
Identity = 251/265 (94.72%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNF 126
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARN+QNEPV TSSE VQAGRSSG SNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 127 APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 186
            PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 187 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 246
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 247 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGK 306
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+MKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 307 APKISEDKIDNMVKELKDREEKRKS 331
           APKISEDKIDNMVKELKDREEKRKS
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKS 265

[Close]

BLAST of Csor.00g130430 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 502 bits (1292), Expect = 2.99e-176
Identity = 250/265 (94.34%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNF 126
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARN+QNEPV TSSE VQAGRSSG SNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 127 APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 186
            PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 187 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 246
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 247 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGK 306
           YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN+MK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 307 APKISEDKIDNMVKELKDREEKRKS 331
           APKISEDKIDNMVKELKDREEKRKS
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKS 265

[Close]

BLAST of Csor.00g130430 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 493 bits (1269), Expect = 9.43e-173
Identity = 244/265 (92.08%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNRQNEPVATSSEAVQAGRSSGPSNF 126
           MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+++NEPV TSSE VQAGRSSG S+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 127 APPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARKA 186
            PPDEYEDLHDEKP+EEGHSDGD DK SG ENVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 187 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESK 246
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 247 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYGK 306
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYN+MKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 307 APKISEDKIDNMVKELKDREEKRKS 331
           APKISEDKIDNMVKELKDR+EKRKS
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKS 265

[Close]

BLAST of Csor.00g130430 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 326.2 bits (835), Expect = 3.4e-89
Identity = 177/265 (66.79%), Postives = 201/265 (75.85%), Query Frame = 0


Query: 67  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKAR-NRQNEPVATSSEAVQAGRSSGPSN 126
           M  E RVHPDC NASNPYHEC EYCF+ IAE KAR  +QN  +A   E  +         
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEKQNTGLAKVHEQTR--------- 60

Query: 127 FAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFELRLKMNEARK 186
             P D+     D   EEE   D    ++        D T+LTGR+KKLFELRLKMNEARK
Sbjct: 61  -EPLDDKRIEEDSSEEEEEEEDNQEPQV--------DVTQLTGRQKKLFELRLKMNEARK 120

Query: 187 ANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAES 246
           +NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAES
Sbjct: 121 SNQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAES 180

Query: 247 KYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNRMKESDPEFYREASSLQYG 306
           KYKKWEK+P P GWDVFNQKTLY+AYKKRTKN+ VDLEEYNRM+ +DPEFYREASSLQYG
Sbjct: 181 KYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYG 240

Query: 307 KAPKISEDKIDNMVKELKDREEKRK 331
           KAPK S+DKID M KEL DRE+KR+
Sbjct: 241 KAPKTSQDKIDKMAKELLDREQKRQ 247

The following BLAST results are available for this feature:

BLAST of Csor.00g130430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVQ6	3.7e-08	32.94	Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1	[more]
Q28G05	1.1e-07	32.35	Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1	[more]
Q9D198	2.7e-06	32.73	Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1	[more]
Q4QRB2	2.7e-06	32.73	Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1	[more]
Q6DGP2	1.0e-05	30.30	Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1	[more]

BLAST of Csor.00g130430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604945.1	7.06e-276	100.00	hypothetical protein SDJN03_02262, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027023.1	3.59e-190	98.91	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023532640.1	2.41e-188	98.18	pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571016.1	9.35e-183	89.90	hypothetical protein SDJN03_29931, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022947463.1	1.24e-182	98.49	pre-mRNA-splicing factor syf2-like [Cucurbita moschata]	[more]

BLAST of Csor.00g130430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6N2	6.02e-183	98.49	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111451319 PE=3...	[more]
A0A6J1I290	9.46e-180	96.60	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111469841 PE=3 S...	[more]
A0A6J1FXE9	1.04e-176	94.72	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3...	[more]
A0A6J1JD37	2.99e-176	94.34	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S...	[more]
A0A0A0LJ81	9.43e-173	92.08	Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV...	[more]

BLAST of Csor.00g130430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16860.1	3.4e-89	66.79	GCIP-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013260	mRNA splicing factor SYF2	PFAM	PF08231	SYF2	coord: 227..331 e-value: 2.3E-12 score: 47.5
IPR013260	mRNA splicing factor SYF2	PANTHER	PTHR13264	GCIP-INTERACTING PROTEIN P29	coord: 67..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..164
None	No IPR available	PANTHER	PTHR13264:SF5	PRE-MRNA-SPLICING FACTOR SYF2	coord: 67..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g130430.m01	Csor.00g130430.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0000974	Prp19 complex