Csor.00g129850 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g129850
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionSignal sequence receptor subunit alpha
LocationCsor_Chr02: 1635969 .. 1639959 (-)
RNA-Seq ExpressionCsor.00g129850
SyntenyCsor.00g129850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCGAAGGCCTACAGGATTTTCTTTTTTGCACTCCTCCTCCTTGCGTCGCTTTTTCTCCAAGGTTTTGCCTCCTTCATTCTGTATTTAGATTTTTTTTTTTTTTTCTGATGTGCATATGTTTAAGCTGTTATCTTTAGATTTAATCGAATTTCGATCTTGCATGCGCGGTTATGGCTTCAATTTTCCATTTTTATTGAGAGCCGGTTCAATTTATGTATATCTCTCTATTTACATTGCATTTGTATATCTTTCAATTGATGTATATTTTCTGTTGGATTTGTGCGCGTTAGATTTTATAAATTCCAGCTATAATTTTCGCGGTGATTTCTTTTTTTTCAACATTTATATGCTGTTCGACTGTCTCTCTGGTGCTTTTCGACTCTCATTCTAGCTGATTTCAGTTTGAAAACTTCCCTTTTGAACGGATGCACAAAATGGATTGGGCAGCGTTATTAGCGTATCCATATTAACCGTATAAATTAAGCTCGATCTTTGGGTTCGTTTAGGGACTTTGACAAGCGAGATTCAAACGTTTTCGTTCTGATTAAAAGCTGTTTTAGTTCTTTCGTTGAAAGTTGTTATCCATCTTCCACAATGTGATGAACTTTTATGTATAATTTTATTCTACTTAGGTTATATATATTTCGTTTTTTCATTTCCTATAGTTGTTAGATGTCAATCGGATGCGAGTGTGGAATCTGAAGAGGCCGTTAAAGATATCACTGACTTGGGGACTGTTGGGGAGGATGAGCAAGATTTTGGTGACGGGAGCTTTAGCCCGGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTAGTGAGTATTCCATTTAAGTTGAACAGAAAAATATTATTCTGGATACGATGTAAAATAGTGTAATCAATCTATGAGTTCCCCAATTGCAGTTGTGGTGGCAGGAGAAGAGGCCGAGCTATTAGCAGGAGTGAAAAATGATGGTAATTGACCCTTAATTATCAACTAATTATGCTATATTGTTAATATTTCTGTTTATAATCAGCAATAGATGGCATTTTTATAGTTCATTTGGTGCCTTATGTGGTTTTAATGATAGTTAATCCATGCTGTCTTGTCTCCTCAGCAATGCAAGATTTCCAGTTTGAGTTTCTTTCTGTTTTTCCAATTTCTGCAGTGTTTAATCTTTTTATTTGTAATTGTGAGGCTTACTAGGGCTTGGGTGCACAAAAAACATGGAGGTTGCCCTTTTACCTCAAGCTGCAATTTAAGAACTTTTTCTTGAAAGGATTGTTTAAAATTTCCTTCACGTATTCTCAATGGAGTTACTGCTGTTCTCCCATATATATATATATTTTTTTTCCTTTTCCAATTGCTGCTAGTTGTTTGATATGTTTCTTACTTCATTTATTTTTTATGAAAAAACAGGGGACTCTAGCTTGAATGTCATTGCAATTAAAGCCAGTGTTCATTACACTTTTGATCACCGAGTACTAATTCAAAATCTTACCGCACAGGTAATGTGAAAGCATGGTTAATGTATATGTGTGCTTTTCATCAACTCACTGAATAGCCTTTATCTGGTCTGCTATCTGCAAGCATGATTTTGTGCCAATAAAATTCCAGAACTTTTACTCACTGGGCTTAAGTATTCGTGATATAGCAGTCATTTCACTCATGTTGTATATTAGGGGGGTGAATTCTTGATTGAGTTAAAGCTGTGAGATATGAACCAAATCTCTGGAAGCATGGCCTTTCTCATCTCTTGGAGCTTTGTGCCTGCTTTAGCTTATTAGAATCCATAATATAAAACACCTTTCTTGAGCCACAAGCTTAGGAGGAGATACTATTGCTGTTCGACTTTATTATCATACATTAACAGTAATTACCTGCCACATATACTCGATACAAGAAATGGCCACTATATAAACTTAAAGAAGTGCATAGGTTAAGGCCAAGAAAAGAGGAGGTACTACAATCAGGTTAAGATACTGCATTGATTTTTGTAGCTGAACTTGTGTTGCATTCTTTTATGTAGTCCTTTCTACGTAGATAATCACAGAAATAGTAGAAAATTTGTAATAGAGTTGTAGAGAACGTGTGGAATTTGAAGATATAGTTTTCTGTTTCCTCTTGGAATTCTGTTAATTTCTTATTTTGTGATTATGAGCTCTTCATGATTTTTGCGAATTCTATTGTAGGTGTGTTTGGTCTCCTTAACATAGTTGTTAATCGTTTACAAAGGGATACTTAATCTCACACTATATTTTTGGCTTTTTCGTGAAGTCCTTTTTCGCACATAACTTGAGTTCTTTATTCTAAAAAAAGTAAAAACGAAAGGTCTTATTTATTTGTTCTAAGCTTTCTTATGTGCCTGTATGTACATATTGCTTGCTACAGCGTTTTGATTTTAATTGATTACCTTCTATTATTTTCTTACATTTATGTTCTTGTTTTGGTTGCAGCCTTTTAATAATGCATCAGTACCAGCATCCTCACAAGCAACTTTCCCATACTTTTTTGCTGTCAGCAAATATCTTCAGGTCTTTGTGTTGCTGTGATGGTCTTCTACATTGAAATTTGATGTGTTGTTTTCAAAATTATTTTTCTTTGGTCTGTGTGTTTTTGAACTTCAAGCACGCATACCATAAAAATAGCTAAAAAGGCATTTCTTCTCTTTGTGCAGCCTGGGAATTTTGATCTTGTTGGAACCATCATTTATGAGATGGATCAGCATCCATATCAGAGTACATTCTTCAATGGTACCATTGAAGTTGCTGAAGCCAGTGGTTTTCTCAGCATTGAATCTGTATTTCTCGTTACCCTTGGAATTGCACTAATCGTGTTGCTTGGCTTATGGATTCACGGTCAAATACAGAATCTTTCCAAGGTACACATCTGCTGAATCTAAATTTTAGGATTTTTTTTCTACTTTTGAGCAGCAAACTCTGAATATCAGTGTTGAAGATTCATATGCAGCGTGCCTGTGGATGAATTATGTTTAACCGTAAAAAAGGATTCAACTAGCTGAGTGTTTAAAAAATCTGCTTACAAATTTATAGATTGATTGAGTAATTCCCCTCGCCCAAGGTTCTATTTCTTATCATCTTTTTTCTGTATTGTTTTGGTCAATCAAATCTTCTCAATTTCCTATCAAGGTTGATTTTTAACAGGTATATTTTCACTAAAATTATTGCATTTATTTTGCTTGGGAAAAATTTGCATCTATTTAGCAATAAGTTTATATAATAGATTTTGAGAAGAATCATTGGCTAACAGATGACCATTGTCTCACACCATTGGTTTCTTTCCTCTACAGCAAAACTGGACGTGGTTTTTGTACTTGTGCGTTTTAATTTGTTTTAGCTCCTTGACTAATTGTAATTTCTGTCCTTTTTTTTAAAAGGTAATAGTTGTTGCAGATTGGAATGGATTTTTGTGATTTCGTTGGTTTAGGTTGCGAGGACTTCTCATCTCTTCACTTTGTAATTATTCCCTTTCATTGGTGAAAACGATCTCGTTAAAATCAAATAAATAGGAAAACTCTTGTATTTCCTTTTCTTTTCTTTTCTATTTTTTTAGTAGAACTGTTATATTTATTTATTTATTTATTGGAAATTAGATTGGAATTCTGAATTTCTTACCCTCATGATCATGAGTTGATGGCTATTGACTGTTCTATTGCTTCAACATTTAACATTCTCTATTTAGCTTTTTGACTTTACCCCGCGCGCCCATATTAAGAAGCTATCTTACAATGCTCTTTTATTTGGTTAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCTTCAGATGCATCATTAGACGAATGGCTTGAGGTAAGTTCATTGACTTGTAATTAAATTTGATTAGAATTTTAAAGTCGTTTCATCTCACTGCTGACTGAGACTGATATATTCCTCTCTTTGATATGCAGGGCACTGCATATTCTCAGTCATCGTCAAACAAATTAAAGAAAAAGAAGTAA

mRNA sequence

ATGGCGTCGAAGGCCTACAGGATTTTCTTTTTTGCACTCCTCCTCCTTGCGTCGCTTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGAGTGTGGAATCTGAAGAGGCCGTTAAAGATATCACTGACTTGGGGACTGTTGGGGAGGATGAGCAAGATTTTGGTGACGGGAGCTTTAGCCCGGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATTGTGGTGGCAGGAGAAGAGGCCGAGCTATTAGCAGGAGTGAAAAATGATGGGGACTCTAGCTTGAATGTCATTGCAATTAAAGCCAGTGTTCATTACACTTTTGATCACCGAGTACTAATTCAAAATCTTACCGCACAGCCTTTTAATAATGCATCAGTACCAGCATCCTCACAAGCAACTTTCCCATACTTTTTTGCTGTCAGCAAATATCTTCAGCCTGGGAATTTTGATCTTGTTGGAACCATCATTTATGAGATGGATCAGCATCCATATCAGAGTACATTCTTCAATGGTACCATTGAAGTTGCTGAAGCCAGTGGTTTTCTCAGCATTGAATCTGTATTTCTCGTTACCCTTGGAATTGCACTAATCGTGTTGCTTGGCTTATGGATTCACGGTCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCTTCAGATGCATCATTAGACGAATGGCTTGAGGGCACTGCATATTCTCAGTCATCGTCAAACAAATTAAAGAAAAAGAAGTAA

Coding sequence (CDS)

ATGGCGTCGAAGGCCTACAGGATTTTCTTTTTTGCACTCCTCCTCCTTGCGTCGCTTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGAGTGTGGAATCTGAAGAGGCCGTTAAAGATATCACTGACTTGGGGACTGTTGGGGAGGATGAGCAAGATTTTGGTGACGGGAGCTTTAGCCCGGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATTGTGGTGGCAGGAGAAGAGGCCGAGCTATTAGCAGGAGTGAAAAATGATGGGGACTCTAGCTTGAATGTCATTGCAATTAAAGCCAGTGTTCATTACACTTTTGATCACCGAGTACTAATTCAAAATCTTACCGCACAGCCTTTTAATAATGCATCAGTACCAGCATCCTCACAAGCAACTTTCCCATACTTTTTTGCTGTCAGCAAATATCTTCAGCCTGGGAATTTTGATCTTGTTGGAACCATCATTTATGAGATGGATCAGCATCCATATCAGAGTACATTCTTCAATGGTACCATTGAAGTTGCTGAAGCCAGTGGTTTTCTCAGCATTGAATCTGTATTTCTCGTTACCCTTGGAATTGCACTAATCGTGTTGCTTGGCTTATGGATTCACGGTCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCTTCAGATGCATCATTAGACGAATGGCTTGAGGGCACTGCATATTCTCAGTCATCGTCAAACAAATTAAAGAAAAAGAAGTAA

Protein sequence

MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFSPAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEGTAYSQSSSNKLKKKK
Homology
BLAST of Csor.00g129850 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3)

HSP 1 Score: 288.5 bits (737), Expect = 7.5e-77
Identity = 154/255 (60.39%), Postives = 194/255 (76.08%), Query Frame = 0

Query: 7   RIFFFALLLLASLFLQVVRCQSDASVES---EEAVKDITDLGTVGEDEQDFGDGSFSPAP 66
           R+ F ALLLLAS  LQV RCQSDA   S   ++ V + TD   V ED+ D  D + S  P
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTD-DAVEEDDHDL-DMNLSSFP 64

Query: 67  GVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTA 126
           GV+TVCVFPKNSA++V AGEE ELL G+KN+G + + V+ I+ASVH  +DH++L+QNLT 
Sbjct: 65  GVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTM 124

Query: 127 QPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEA 186
              NNAS+P S QATFPY FAVS+YLQPG FDLVG IIY+++  PYQS F+NGTIEV E+
Sbjct: 125 LRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVES 184

Query: 187 SGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEG 246
            G LS ESVFL+TLGI L++LLGLW + Q+Q L+KKTK+  KVEVGT++++ASLDEWLEG
Sbjct: 185 GGLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEG 244

Query: 247 TAYSQSSSNKLKKKK 259
           T  +++SS K K KK
Sbjct: 245 TTLAKTSSGKTKNKK 257

BLAST of Csor.00g129850 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.4e-20
Identity = 64/203 (31.53%), Postives = 101/203 (49.75%), Query Frame = 0

Query: 60  SPAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQ 119
           +P   V    +FP N  +   AG   E+L G  N+ D +LN+  I AS+++  D  V IQ
Sbjct: 34  TPTSDVSFSYIFPDNQDKNFAAGSVVEVLVGFTNNADKALNITHIFASLNHPQDFSVFIQ 93

Query: 120 NLTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIE 179
           N T   F  A V     AT  Y F  S+YL+P  F L+ ++ Y+     +  TFFN TI 
Sbjct: 94  NYTRGDFGIA-VEKGHHATLAYRFVPSEYLEPREFGLLISLEYQDGAQNFTQTFFNSTIN 153

Query: 180 VAEASGFLSIESVFLVTLGIALIVLLGLWIHG------QIQNLSKKTKRAPKVEVGTKAS 239
           + E      ++S FL+ LG+  +  +G  ++G      +++ +SK  K A +VE   + +
Sbjct: 154 ITEKETSFDMDSFFLILLGLGFVGGIGYIVYGKMPKQKKVRTVSKVNKNAVRVETEDETA 213

Query: 240 DASLDEWLEGTAYSQSSSNKLKK 257
                EWL GT+ + S    ++K
Sbjct: 214 -----EWLSGTSAASSKVKSVQK 230

BLAST of Csor.00g129850 vs. NCBI nr
Match: KAG6605003.1 (Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486 bits (1251), Expect = 1.12e-172
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS
Sbjct: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
           AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNKLKKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_022946984.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG7035036.1 Translocon-associated protein subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482 bits (1241), Expect = 3.73e-171
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKAYRIFFFALLLLAS FLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS
Sbjct: 1   MASKAYRIFFFALLLLASPFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
           AEASGFLSIESVFLVTLGIAL+VLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALMVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNKLKKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_022971155.1 (translocon-associated protein subunit alpha-like [Cucurbita maxima])

HSP 1 Score: 474 bits (1221), Expect = 4.17e-168
Identity = 251/258 (97.29%), Postives = 254/258 (98.45%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKAYRIFFFAL LLAS FLQVVRCQSDASVESEEAVKDI+DLGTVGEDEQDFGDGSFS
Sbjct: 1   MASKAYRIFFFALFLLASPFLQVVRCQSDASVESEEAVKDISDLGTVGEDEQDFGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           LTAQP+NNASVPASSQATFPYFFAVSKYLQPGNFD+VGTIIYEMDQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPYNNASVPASSQATFPYFFAVSKYLQPGNFDIVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
           AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNL KKTKRAPKVE GTKASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLPKKTKRAPKVEFGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNKLKKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_023532567.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473 bits (1218), Expect = 1.20e-167
Identity = 252/258 (97.67%), Postives = 254/258 (98.45%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKA+RIF FALLLLA  FLQVVRCQS ASVESEEAVKDITDLGTVGEDEQDFGDGSFS
Sbjct: 1   MASKAFRIFIFALLLLALPFLQVVRCQSGASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVI+IKASVHYTFDHRVLIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVISIKASVHYTFDHRVLIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
           AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNKLKKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_022146235.1 (translocon-associated protein subunit alpha [Momordica charantia])

HSP 1 Score: 437 bits (1123), Expect = 3.58e-153
Identity = 231/258 (89.53%), Postives = 243/258 (94.19%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKA+RI F ALLLLAS  LQVVRCQSDA VE E+AV+D+TDLG VGEDEQD+GDGSFS
Sbjct: 1   MASKAFRILFLALLLLASPVLQVVRCQSDADVEYEDAVEDVTDLGIVGEDEQDYGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHRV+IQN
Sbjct: 61  PAQGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           L+AQ FNNASVPASSQATFPYFF VS++LQ GNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LSAQGFNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
            EA GFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDASLDEW
Sbjct: 181 VEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 258

BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1G5G5 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111451000 PE=3 SV=1)

HSP 1 Score: 482 bits (1241), Expect = 1.81e-171
Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKAYRIFFFALLLLAS FLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS
Sbjct: 1   MASKAYRIFFFALLLLASPFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
           AEASGFLSIESVFLVTLGIAL+VLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALMVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNKLKKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1I4Y6 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111469918 PE=3 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 2.02e-168
Identity = 251/258 (97.29%), Postives = 254/258 (98.45%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKAYRIFFFAL LLAS FLQVVRCQSDASVESEEAVKDI+DLGTVGEDEQDFGDGSFS
Sbjct: 1   MASKAYRIFFFALFLLASPFLQVVRCQSDASVESEEAVKDISDLGTVGEDEQDFGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN
Sbjct: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           LTAQP+NNASVPASSQATFPYFFAVSKYLQPGNFD+VGTIIYEMDQHPYQSTFFNGTIEV
Sbjct: 121 LTAQPYNNASVPASSQATFPYFFAVSKYLQPGNFDIVGTIIYEMDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
           AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNL KKTKRAPKVE GTKASDASLDEW
Sbjct: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLPKKTKRAPKVEFGTKASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNKLKKKK
Sbjct: 241 LEGTAYSQSSSNKLKKKK 258

BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1CWQ9 (Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC111015499 PE=3 SV=1)

HSP 1 Score: 437 bits (1123), Expect = 1.73e-153
Identity = 231/258 (89.53%), Postives = 243/258 (94.19%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKA+RI F ALLLLAS  LQVVRCQSDA VE E+AV+D+TDLG VGEDEQD+GDGSFS
Sbjct: 1   MASKAFRILFLALLLLASPVLQVVRCQSDADVEYEDAVEDVTDLGIVGEDEQDYGDGSFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHRV+IQN
Sbjct: 61  PAQGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRVVIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           L+AQ FNNASVPASSQATFPYFF VS++LQ GNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LSAQGFNNASVPASSQATFPYFFGVSRFLQSGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
            EA GFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTK+SDASLDEW
Sbjct: 181 VEAGGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKSSDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 258

BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1FY56 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111448970 PE=3 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 1.86e-150
Identity = 230/258 (89.15%), Postives = 239/258 (92.64%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKA+RIFF ALLLLAS FLQVVRCQSDA VES E+V+D TDLG VG DEQDFGD SFS
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESGESVEDATDLGIVG-DEQDFGDASFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           L+ Q FNNASV AS+QATFPYFFAVSKYLQPGNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
            EA GFLS ESVFLVTLG ALIVL GLWIHGQIQNLSKKTKRAPKVEVGT+ASDASLDEW
Sbjct: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 257

BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1JCX1 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111484586 PE=3 SV=1)

HSP 1 Score: 427 bits (1098), Expect = 1.08e-149
Identity = 228/258 (88.37%), Postives = 239/258 (92.64%), Query Frame = 0

Query: 1   MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFS 60
           MASKA+RIFF ALLLLAS FLQVVRCQSDA VES ++V+D TDLG +G DEQDFGD SFS
Sbjct: 1   MASKAFRIFFLALLLLASPFLQVVRCQSDADVESVKSVEDATDLGIIG-DEQDFGDASFS 60

Query: 61  PAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQN 120
           PA GVDTVCVFPKNSARIVVAGEE ELLAG+KNDGDSSLNVIAIKASVHYTFDHR+LIQN
Sbjct: 61  PATGVDTVCVFPKNSARIVVAGEETELLAGMKNDGDSSLNVIAIKASVHYTFDHRILIQN 120

Query: 121 LTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEV 180
           L+ Q FNNASV AS+QATFPYFFAVSKYLQPGNFDLVGTIIYE+DQHPYQSTFFNGTIEV
Sbjct: 121 LSVQGFNNASVQASTQATFPYFFAVSKYLQPGNFDLVGTIIYEIDQHPYQSTFFNGTIEV 180

Query: 181 AEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEW 240
            EA GFLS ESVFLVTLG ALIVL GLWIHGQIQNLSKKTKRAPKVEVGT+ASDASLDEW
Sbjct: 181 VEAGGFLSTESVFLVTLGAALIVLFGLWIHGQIQNLSKKTKRAPKVEVGTRASDASLDEW 240

Query: 241 LEGTAYSQSSSNKLKKKK 258
           LEGTAYSQSSSNK KKKK
Sbjct: 241 LEGTAYSQSSSNKSKKKK 257

BLAST of Csor.00g129850 vs. TAIR 10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-78
Identity = 154/255 (60.39%), Postives = 194/255 (76.08%), Query Frame = 0

Query: 7   RIFFFALLLLASLFLQVVRCQSDASVES---EEAVKDITDLGTVGEDEQDFGDGSFSPAP 66
           R+ F ALLLLAS  LQV RCQSDA   S   ++ V + TD   V ED+ D  D + S  P
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTD-DAVEEDDHDL-DMNLSSFP 64

Query: 67  GVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTA 126
           GV+TVCVFPKNSA++V AGEE ELL G+KN+G + + V+ I+ASVH  +DH++L+QNLT 
Sbjct: 65  GVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTM 124

Query: 127 QPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEA 186
              NNAS+P S QATFPY FAVS+YLQPG FDLVG IIY+++  PYQS F+NGTIEV E+
Sbjct: 125 LRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVES 184

Query: 187 SGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEG 246
            G LS ESVFL+TLGI L++LLGLW + Q+Q L+KKTK+  KVEVGT++++ASLDEWLEG
Sbjct: 185 GGLLSGESVFLLTLGIGLLLLLGLWAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEG 244

Query: 247 TAYSQSSSNKLKKKK 259
           T  +++SS K K KK
Sbjct: 245 TTLAKTSSGKTKNKK 257

BLAST of Csor.00g129850 vs. TAIR 10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-69
Identity = 139/253 (54.94%), Postives = 182/253 (71.94%), Query Frame = 0

Query: 5   AYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFSPAPG 64
           ++R+ FFA LLL S FL+V  CQSD    SE++  +++D+G    D ++      + APG
Sbjct: 4   SFRLLFFAFLLLVSPFLKVALCQSD----SEDSGFEVSDVGEEESDAEEVFGLELTSAPG 63

Query: 65  VDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTAQ 124
           ++T+CVFPKNSA+I+ AG E ELL G+KNDG S+++++A+K S+H  FD    +QNLTA 
Sbjct: 64  IETLCVFPKNSAKIIKAGVETELLVGMKNDGQSNVDIVAVKGSLHLPFDQNA-VQNLTAL 123

Query: 125 PFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEAS 184
            F+NASVP S+QAT PY FAVSK+LQ G FD VGTIIYE+D  PYQS F+NGTIEV E  
Sbjct: 124 SFSNASVPTSAQATLPYAFAVSKFLQAGAFDFVGTIIYEIDGKPYQSIFYNGTIEVVEDG 183

Query: 185 GFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEGT 244
               +ESVFL  L I +I  L ++I   +++++KKTKRAPKVEVGT   DAS DEWLEGT
Sbjct: 184 PLFRMESVFLSGLLIFVIAFLAIYIQNVLKHMTKKTKRAPKVEVGTATKDASHDEWLEGT 243

Query: 245 AYSQSSSNKLKKK 258
           +Y+QSSS   KKK
Sbjct: 244 SYTQSSSKSKKKK 251

BLAST of Csor.00g129850 vs. TAIR 10
Match: AT2G21160.2 (Translocon-associated protein (TRAP), alpha subunit )

HSP 1 Score: 201.8 bits (512), Expect = 6.5e-52
Identity = 109/184 (59.24%), Postives = 135/184 (73.37%), Query Frame = 0

Query: 7   RIFFFALLLLASLFLQVVRCQSDASVES---EEAVKDITDLGTVGEDEQDFGDGSFSPAP 66
           R+ F ALLLLAS  LQV RCQSDA   S   ++ V + TD   V ED+ D  D + S  P
Sbjct: 5   RVLFLALLLLASPLLQVARCQSDAEDHSSLVDDVVGENTD-DAVEEDDHDL-DMNLSSFP 64

Query: 67  GVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTA 126
           GV+TVCVFPKNSA++V AGEE ELL G+KN+G + + V+ I+ASVH  +DH++L+QNLT 
Sbjct: 65  GVETVCVFPKNSAKLVPAGEETELLVGLKNEGKTRVGVMGIRASVHLPYDHKLLVQNLTM 124

Query: 127 QPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEA 186
              NNAS+P S QATFPY FAVS+YLQPG FDLVG IIY+++  PYQS F+NGTIEV E+
Sbjct: 125 LRLNNASIPTSLQATFPYIFAVSQYLQPGAFDLVGYIIYDVEGKPYQSVFYNGTIEVVES 184

Query: 187 SGFL 188
            G L
Sbjct: 185 GGNL 186

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P454347.5e-7760.39Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Q54R458.4e-2031.53Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689... [more]
Match NameE-valueIdentityDescription
KAG6605003.11.12e-172100.00Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma sub... [more]
XP_022946984.13.73e-17199.22translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG703503... [more]
XP_022971155.14.17e-16897.29translocon-associated protein subunit alpha-like [Cucurbita maxima][more]
XP_023532567.11.20e-16797.67translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo][more]
XP_022146235.13.58e-15389.53translocon-associated protein subunit alpha [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1G5G51.81e-17199.22Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A6J1I4Y62.02e-16897.29Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1114699... [more]
A0A6J1CWQ91.73e-15389.53Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1FY561.86e-15089.15Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1JCX11.08e-14988.37Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1114845... [more]
Match NameE-valueIdentityDescription
AT2G21160.15.3e-7860.39Translocon-associated protein (TRAP), alpha subunit [more]
AT2G16595.11.5e-6954.94Translocon-associated protein (TRAP), alpha subunit [more]
AT2G21160.26.5e-5259.24Translocon-associated protein (TRAP), alpha subunit [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005595Translocon-associated protein (TRAP), alpha subunitPFAMPF03896TRAP_alphacoord: 29..241
e-value: 1.5E-27
score: 96.6
NoneNo IPR availablePANTHERPTHR12924:SF5SUBFAMILY NOT NAMEDcoord: 5..258
NoneNo IPR availablePANTHERPTHR12924TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNITcoord: 5..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g129850.m01Csor.00g129850.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane