Csor.00g129850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCGAAGGCCTACAGGATTTTCTTTTTTGCACTCCTCCTCCTTGCGTCGCTTTTTCTCCAAGGTTTTGCCTCCTTCATTCTGTATTTAGATTTTTTTTTTTTTTTCTGATGTGCATATGTTTAAGCTGTTATCTTTAGATTTAATCGAATTTCGATCTTGCATGCGCGGTTATGGCTTCAATTTTCCATTTTTATTGAGAGCCGGTTCAATTTATGTATATCTCTCTATTTACATTGCATTTGTATATCTTTCAATTGATGTATATTTTCTGTTGGATTTGTGCGCGTTAGATTTTATAAATTCCAGCTATAATTTTCGCGGTGATTTCTTTTTTTTCAACATTTATATGCTGTTCGACTGTCTCTCTGGTGCTTTTCGACTCTCATTCTAGCTGATTTCAGTTTGAAAACTTCCCTTTTGAACGGATGCACAAAATGGATTGGGCAGCGTTATTAGCGTATCCATATTAACCGTATAAATTAAGCTCGATCTTTGGGTTCGTTTAGGGACTTTGACAAGCGAGATTCAAACGTTTTCGTTCTGATTAAAAGCTGTTTTAGTTCTTTCGTTGAAAGTTGTTATCCATCTTCCACAATGTGATGAACTTTTATGTATAATTTTATTCTACTTAGGTTATATATATTTCGTTTTTTCATTTCCTATAGTTGTTAGATGTCAATCGGATGCGAGTGTGGAATCTGAAGAGGCCGTTAAAGATATCACTGACTTGGGGACTGTTGGGGAGGATGAGCAAGATTTTGGTGACGGGAGCTTTAGCCCGGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTAGTGAGTATTCCATTTAAGTTGAACAGAAAAATATTATTCTGGATACGATGTAAAATAGTGTAATCAATCTATGAGTTCCCCAATTGCAGTTGTGGTGGCAGGAGAAGAGGCCGAGCTATTAGCAGGAGTGAAAAATGATGGTAATTGACCCTTAATTATCAACTAATTATGCTATATTGTTAATATTTCTGTTTATAATCAGCAATAGATGGCATTTTTATAGTTCATTTGGTGCCTTATGTGGTTTTAATGATAGTTAATCCATGCTGTCTTGTCTCCTCAGCAATGCAAGATTTCCAGTTTGAGTTTCTTTCTGTTTTTCCAATTTCTGCAGTGTTTAATCTTTTTATTTGTAATTGTGAGGCTTACTAGGGCTTGGGTGCACAAAAAACATGGAGGTTGCCCTTTTACCTCAAGCTGCAATTTAAGAACTTTTTCTTGAAAGGATTGTTTAAAATTTCCTTCACGTATTCTCAATGGAGTTACTGCTGTTCTCCCATATATATATATATTTTTTTTCCTTTTCCAATTGCTGCTAGTTGTTTGATATGTTTCTTACTTCATTTATTTTTTATGAAAAAACAGGGGACTCTAGCTTGAATGTCATTGCAATTAAAGCCAGTGTTCATTACACTTTTGATCACCGAGTACTAATTCAAAATCTTACCGCACAGGTAATGTGAAAGCATGGTTAATGTATATGTGTGCTTTTCATCAACTCACTGAATAGCCTTTATCTGGTCTGCTATCTGCAAGCATGATTTTGTGCCAATAAAATTCCAGAACTTTTACTCACTGGGCTTAAGTATTCGTGATATAGCAGTCATTTCACTCATGTTGTATATTAGGGGGGTGAATTCTTGATTGAGTTAAAGCTGTGAGATATGAACCAAATCTCTGGAAGCATGGCCTTTCTCATCTCTTGGAGCTTTGTGCCTGCTTTAGCTTATTAGAATCCATAATATAAAACACCTTTCTTGAGCCACAAGCTTAGGAGGAGATACTATTGCTGTTCGACTTTATTATCATACATTAACAGTAATTACCTGCCACATATACTCGATACAAGAAATGGCCACTATATAAACTTAAAGAAGTGCATAGGTTAAGGCCAAGAAAAGAGGAGGTACTACAATCAGGTTAAGATACTGCATTGATTTTTGTAGCTGAACTTGTGTTGCATTCTTTTATGTAGTCCTTTCTACGTAGATAATCACAGAAATAGTAGAAAATTTGTAATAGAGTTGTAGAGAACGTGTGGAATTTGAAGATATAGTTTTCTGTTTCCTCTTGGAATTCTGTTAATTTCTTATTTTGTGATTATGAGCTCTTCATGATTTTTGCGAATTCTATTGTAGGTGTGTTTGGTCTCCTTAACATAGTTGTTAATCGTTTACAAAGGGATACTTAATCTCACACTATATTTTTGGCTTTTTCGTGAAGTCCTTTTTCGCACATAACTTGAGTTCTTTATTCTAAAAAAAGTAAAAACGAAAGGTCTTATTTATTTGTTCTAAGCTTTCTTATGTGCCTGTATGTACATATTGCTTGCTACAGCGTTTTGATTTTAATTGATTACCTTCTATTATTTTCTTACATTTATGTTCTTGTTTTGGTTGCAGCCTTTTAATAATGCATCAGTACCAGCATCCTCACAAGCAACTTTCCCATACTTTTTTGCTGTCAGCAAATATCTTCAGGTCTTTGTGTTGCTGTGATGGTCTTCTACATTGAAATTTGATGTGTTGTTTTCAAAATTATTTTTCTTTGGTCTGTGTGTTTTTGAACTTCAAGCACGCATACCATAAAAATAGCTAAAAAGGCATTTCTTCTCTTTGTGCAGCCTGGGAATTTTGATCTTGTTGGAACCATCATTTATGAGATGGATCAGCATCCATATCAGAGTACATTCTTCAATGGTACCATTGAAGTTGCTGAAGCCAGTGGTTTTCTCAGCATTGAATCTGTATTTCTCGTTACCCTTGGAATTGCACTAATCGTGTTGCTTGGCTTATGGATTCACGGTCAAATACAGAATCTTTCCAAGGTACACATCTGCTGAATCTAAATTTTAGGATTTTTTTTCTACTTTTGAGCAGCAAACTCTGAATATCAGTGTTGAAGATTCATATGCAGCGTGCCTGTGGATGAATTATGTTTAACCGTAAAAAAGGATTCAACTAGCTGAGTGTTTAAAAAATCTGCTTACAAATTTATAGATTGATTGAGTAATTCCCCTCGCCCAAGGTTCTATTTCTTATCATCTTTTTTCTGTATTGTTTTGGTCAATCAAATCTTCTCAATTTCCTATCAAGGTTGATTTTTAACAGGTATATTTTCACTAAAATTATTGCATTTATTTTGCTTGGGAAAAATTTGCATCTATTTAGCAATAAGTTTATATAATAGATTTTGAGAAGAATCATTGGCTAACAGATGACCATTGTCTCACACCATTGGTTTCTTTCCTCTACAGCAAAACTGGACGTGGTTTTTGTACTTGTGCGTTTTAATTTGTTTTAGCTCCTTGACTAATTGTAATTTCTGTCCTTTTTTTTAAAAGGTAATAGTTGTTGCAGATTGGAATGGATTTTTGTGATTTCGTTGGTTTAGGTTGCGAGGACTTCTCATCTCTTCACTTTGTAATTATTCCCTTTCATTGGTGAAAACGATCTCGTTAAAATCAAATAAATAGGAAAACTCTTGTATTTCCTTTTCTTTTCTTTTCTATTTTTTTAGTAGAACTGTTATATTTATTTATTTATTTATTGGAAATTAGATTGGAATTCTGAATTTCTTACCCTCATGATCATGAGTTGATGGCTATTGACTGTTCTATTGCTTCAACATTTAACATTCTCTATTTAGCTTTTTGACTTTACCCCGCGCGCCCATATTAAGAAGCTATCTTACAATGCTCTTTTATTTGGTTAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCTTCAGATGCATCATTAGACGAATGGCTTGAGGTAAGTTCATTGACTTGTAATTAAATTTGATTAGAATTTTAAAGTCGTTTCATCTCACTGCTGACTGAGACTGATATATTCCTCTCTTTGATATGCAGGGCACTGCATATTCTCAGTCATCGTCAAACAAATTAAAGAAAAAGAAGTAA ATGGCGTCGAAGGCCTACAGGATTTTCTTTTTTGCACTCCTCCTCCTTGCGTCGCTTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGAGTGTGGAATCTGAAGAGGCCGTTAAAGATATCACTGACTTGGGGACTGTTGGGGAGGATGAGCAAGATTTTGGTGACGGGAGCTTTAGCCCGGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATTGTGGTGGCAGGAGAAGAGGCCGAGCTATTAGCAGGAGTGAAAAATGATGGGGACTCTAGCTTGAATGTCATTGCAATTAAAGCCAGTGTTCATTACACTTTTGATCACCGAGTACTAATTCAAAATCTTACCGCACAGCCTTTTAATAATGCATCAGTACCAGCATCCTCACAAGCAACTTTCCCATACTTTTTTGCTGTCAGCAAATATCTTCAGCCTGGGAATTTTGATCTTGTTGGAACCATCATTTATGAGATGGATCAGCATCCATATCAGAGTACATTCTTCAATGGTACCATTGAAGTTGCTGAAGCCAGTGGTTTTCTCAGCATTGAATCTGTATTTCTCGTTACCCTTGGAATTGCACTAATCGTGTTGCTTGGCTTATGGATTCACGGTCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCTTCAGATGCATCATTAGACGAATGGCTTGAGGGCACTGCATATTCTCAGTCATCGTCAAACAAATTAAAGAAAAAGAAGTAA ATGGCGTCGAAGGCCTACAGGATTTTCTTTTTTGCACTCCTCCTCCTTGCGTCGCTTTTTCTCCAAGTTGTTAGATGTCAATCGGATGCGAGTGTGGAATCTGAAGAGGCCGTTAAAGATATCACTGACTTGGGGACTGTTGGGGAGGATGAGCAAGATTTTGGTGACGGGAGCTTTAGCCCGGCTCCAGGGGTTGATACCGTGTGTGTTTTCCCCAAAAATAGCGCACGTATTGTGGTGGCAGGAGAAGAGGCCGAGCTATTAGCAGGAGTGAAAAATGATGGGGACTCTAGCTTGAATGTCATTGCAATTAAAGCCAGTGTTCATTACACTTTTGATCACCGAGTACTAATTCAAAATCTTACCGCACAGCCTTTTAATAATGCATCAGTACCAGCATCCTCACAAGCAACTTTCCCATACTTTTTTGCTGTCAGCAAATATCTTCAGCCTGGGAATTTTGATCTTGTTGGAACCATCATTTATGAGATGGATCAGCATCCATATCAGAGTACATTCTTCAATGGTACCATTGAAGTTGCTGAAGCCAGTGGTTTTCTCAGCATTGAATCTGTATTTCTCGTTACCCTTGGAATTGCACTAATCGTGTTGCTTGGCTTATGGATTCACGGTCAAATACAGAATCTTTCCAAGAAAACCAAGAGGGCTCCTAAGGTTGAAGTTGGAACCAAGGCTTCAGATGCATCATTAGACGAATGGCTTGAGGGCACTGCATATTCTCAGTCATCGTCAAACAAATTAAAGAAAAAGAAGTAA MASKAYRIFFFALLLLASLFLQVVRCQSDASVESEEAVKDITDLGTVGEDEQDFGDGSFSPAPGVDTVCVFPKNSARIVVAGEEAELLAGVKNDGDSSLNVIAIKASVHYTFDHRVLIQNLTAQPFNNASVPASSQATFPYFFAVSKYLQPGNFDLVGTIIYEMDQHPYQSTFFNGTIEVAEASGFLSIESVFLVTLGIALIVLLGLWIHGQIQNLSKKTKRAPKVEVGTKASDASLDEWLEGTAYSQSSSNKLKKKK Homology
BLAST of Csor.00g129850 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3) HSP 1 Score: 288.5 bits (737), Expect = 7.5e-77 Identity = 154/255 (60.39%), Postives = 194/255 (76.08%), Query Frame = 0
BLAST of Csor.00g129850 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 8.4e-20 Identity = 64/203 (31.53%), Postives = 101/203 (49.75%), Query Frame = 0
BLAST of Csor.00g129850 vs. NCBI nr
Match: KAG6605003.1 (Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 486 bits (1251), Expect = 1.12e-172 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_022946984.1 (translocon-associated protein subunit alpha-like [Cucurbita moschata] >KAG7035036.1 Translocon-associated protein subunit alpha [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 482 bits (1241), Expect = 3.73e-171 Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_022971155.1 (translocon-associated protein subunit alpha-like [Cucurbita maxima]) HSP 1 Score: 474 bits (1221), Expect = 4.17e-168 Identity = 251/258 (97.29%), Postives = 254/258 (98.45%), Query Frame = 0
BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_023532567.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 473 bits (1218), Expect = 1.20e-167 Identity = 252/258 (97.67%), Postives = 254/258 (98.45%), Query Frame = 0
BLAST of Csor.00g129850 vs. NCBI nr
Match: XP_022146235.1 (translocon-associated protein subunit alpha [Momordica charantia]) HSP 1 Score: 437 bits (1123), Expect = 3.58e-153 Identity = 231/258 (89.53%), Postives = 243/258 (94.19%), Query Frame = 0
BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1G5G5 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111451000 PE=3 SV=1) HSP 1 Score: 482 bits (1241), Expect = 1.81e-171 Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1I4Y6 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111469918 PE=3 SV=1) HSP 1 Score: 474 bits (1221), Expect = 2.02e-168 Identity = 251/258 (97.29%), Postives = 254/258 (98.45%), Query Frame = 0
BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1CWQ9 (Signal sequence receptor subunit alpha OS=Momordica charantia OX=3673 GN=LOC111015499 PE=3 SV=1) HSP 1 Score: 437 bits (1123), Expect = 1.73e-153 Identity = 231/258 (89.53%), Postives = 243/258 (94.19%), Query Frame = 0
BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1FY56 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111448970 PE=3 SV=1) HSP 1 Score: 429 bits (1103), Expect = 1.86e-150 Identity = 230/258 (89.15%), Postives = 239/258 (92.64%), Query Frame = 0
BLAST of Csor.00g129850 vs. ExPASy TrEMBL
Match: A0A6J1JCX1 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111484586 PE=3 SV=1) HSP 1 Score: 427 bits (1098), Expect = 1.08e-149 Identity = 228/258 (88.37%), Postives = 239/258 (92.64%), Query Frame = 0
BLAST of Csor.00g129850 vs. TAIR 10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit ) HSP 1 Score: 288.5 bits (737), Expect = 5.3e-78 Identity = 154/255 (60.39%), Postives = 194/255 (76.08%), Query Frame = 0
BLAST of Csor.00g129850 vs. TAIR 10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit ) HSP 1 Score: 260.4 bits (664), Expect = 1.5e-69 Identity = 139/253 (54.94%), Postives = 182/253 (71.94%), Query Frame = 0
BLAST of Csor.00g129850 vs. TAIR 10
Match: AT2G21160.2 (Translocon-associated protein (TRAP), alpha subunit ) HSP 1 Score: 201.8 bits (512), Expect = 6.5e-52 Identity = 109/184 (59.24%), Postives = 135/184 (73.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|