Csor.00g124690 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCCCTCACATTTTCACTCATTTTCCCGCTCCCCACTGTACGAGCGATACACCGCCAGGCCAGGGGAGCCACCGCGATGCTCTCTGAAGTGTCGTTTGGGCGATTCCTAGTCGGATCGCAGTTCTTCATTCTGGCTCGCAACCACGCGGTGCTGGTGGTGAAAGGAGAGAAAACTCTAGAGGAAGTGCGAGGAACCGTGGCCTGAGGAGCATTACTTGCCGACATTGTTGTCCATGAAGGATCGGACAGGATGTTGGGATGGACATCCGCATTTGTACTCGCCGGAGGAGGTCTCTCCGGCGCTCACACACACATTGAGGCTATCGAATTTGAGCTACTCGTACTTCTTTGCAAGGAAGTTCTCGCTGGAATCCTTGACGCCGTTGATGTCATTTTCCGGGACTGAAGTGATTGTCGGCTCGTTTCTCTTACTGGTAAGCATTGTTCATACTTATTCCCAATTGCTTTGTTGTTCGTTCTTGTTTTGCTATACATTTTAGATTCAAATTCAAATTCTGATCTTTAGGTGGATAGTCCAAAATGTTTGAATCGGTTGCATAAATTAAATCCAAAATGTTTGAACCAGGAAATTGAGTTCTTGAACTCTTTACTCTAATACAACCTTAGCAGAGATGACCTTGGAATCTCTGTTTAAAGGTAAATAAGGAATGACAGAAGAGAAATTTCTCCATAGCAGTAGTAGGTATTATATTCCCTATTTTCGTTCCTGTTTTCGTTTGCGCCCCAATCCCAGCCTTACCCCGCTGTGCTCTTTTTTATATAAAAAATATCAAAATTAAGATACAAAATACCACCCTAGCCCATTCCCATTTTGGGCGGAACGGTAGGATTTAATTTATGAAACCGATTAATCCATAAACTAAGTTGATTTATTGAGTTTAGACATTTTTTAGACTCAATCTAATTGTTGGATGTAAAATCTTTCAATTTAAATAATGAACTCAAGGTAATTCAATCATAATATATATATTTTTTTTAATTCATTCCAGCTATTTGAATCGTTTATCGATCTTTTGGATCATCCCTCTTTTTCTTTAACACCCCTGCACAAAACTCAATAAATGGCGTCTATGGGGGGCACTGGCCCCCAAGTGTGGTCTCTTGCTGGTTTATTTTTCTTTTTGAATGCTTCTAGGAGTATTAATAATTAAATATTCCATCTGCTCCTACTTCTCCTTAATATGGGGATTCTGTTTTTAAAGGAAATGCTCGTGCTTAAAGTTTTCTTGCCTTGTCCATCCATTCCCATGTGACTGCACCCCTCTACTGGCTTCTACTTGTGTTTATAGTATTGGTTTATCCTTTTTCTATCTTATGTTTTTCGCCTACTTACTCTTGATGATAGCTAAAAAAAAACACATTGTAACAATACCCATGATTTGTGGGTCTTCCCATGACGGGCCACAAAAATGAACCTCATGAGGTTTGTGGGATTGATGTGAGGGTGAAGATAGATTATATTTCTAAGAGCAAACTCTCGGTAAAATAGACACGAGGAACAAGTAATAGACCGGACCAAACTAGTAACTCCTAACCAGGCAAAGTAGGTACAAAAATGAAATGGACCCTCTATAACGAGTGATCCATGATATCAAATAAATCATTTTTGCCTTTTGATAAATTTACTGATGGCATTAGTCAGAGTGATACTCTTATAAAACTAACTTCAGTAAGAGTGCATCAACAAATATTGCCCTTCCATATAGATCATCATGTTAAACATCTCAGATGTTGCACAAAACTATGTATAACTTGTCTGGCATATTTGAGCTATTTTTCTCACTTGAATATTTGATCCCGTTCATGTGCACTTCTACTATCTAGGTAATTCATAACTTATTTGATATCACTAGCTAGTATCCTCACTCGAGGTCGTAGACATAACCCACATTCTCCATACTTTTGGCACACTTAAATTATAATCTCTCCCTCTGTCTTGTGCTCAATAACTCAATCAAGTTCTAATTAGTTAGGAAGGAGCGTTTGATTTGAGTAAGACCACTGAATTTGTATGGATTTCCTAACTGTATTTCCCGACTTCCAACCTCTTTTTGACAGTATATCTTTGCATTTGTCCATTTGGAAGGTTAAGTCCCCAAGAGAGCAACTCTGA ATGAATTCCCTCACATTTTCACTCATTTTCCCGCTCCCCACTGTACGAGCGATACACCGCCAGGCCAGGGGAGCCACCGCGATGCTCTCTGAAGTGTCGTTTGGGCGATTCCTAGTCGGATCGCAGTTCTTCATTCTGGCTCGCAACCACGCGGTGCTGGATCGGACAGGATGTTGGGATGGACATCCGCATTTGTACTCGCCGGAGGAGGTCTCTCCGGCGCTCACACACACATTGAGGCTATCGAATTTGAGCTACTCGTACTTCTTTGCAAGGAAGTTCTCGCTGGAATCCTTGACGCCGTTGATGTCATTTTCCGGGACTGAAGTGATTGTCGGCTCGTTTCTCTTACTGGTTAAGTCCCCAAGAGAGCAACTCTGA ATGAATTCCCTCACATTTTCACTCATTTTCCCGCTCCCCACTGTACGAGCGATACACCGCCAGGCCAGGGGAGCCACCGCGATGCTCTCTGAAGTGTCGTTTGGGCGATTCCTAGTCGGATCGCAGTTCTTCATTCTGGCTCGCAACCACGCGGTGCTGGATCGGACAGGATGTTGGGATGGACATCCGCATTTGTACTCGCCGGAGGAGGTCTCTCCGGCGCTCACACACACATTGAGGCTATCGAATTTGAGCTACTCGTACTTCTTTGCAAGGAAGTTCTCGCTGGAATCCTTGACGCCGTTGATGTCATTTTCCGGGACTGAAGTGATTGTCGGCTCGTTTCTCTTACTGGTTAAGTCCCCAAGAGAGCAACTCTGA MNSLTFSLIFPLPTVRAIHRQARGATAMLSEVSFGRFLVGSQFFILARNHAVLDRTGCWDGHPHLYSPEEVSPALTHTLRLSNLSYSYFFARKFSLESLTPLMSFSGTEVIVGSFLLLVKSPREQL Homology
BLAST of Csor.00g124690 vs. NCBI nr
Match: KAG6578829.1 (hypothetical protein SDJN03_23277, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 251 bits (642), Expect = 3.53e-84 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g124690 vs. NCBI nr
Match: XP_038886472.1 (glycosyltransferase BC10 [Benincasa hispida] >XP_038886473.1 glycosyltransferase BC10 [Benincasa hispida] >XP_038886474.1 glycosyltransferase BC10 [Benincasa hispida]) HSP 1 Score: 118 bits (296), Expect = 4.11e-29 Identity = 70/130 (53.85%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. NCBI nr
Match: XP_008456621.1 (PREDICTED: uncharacterized protein LOC103496524 [Cucumis melo] >XP_008456622.1 PREDICTED: uncharacterized protein LOC103496524 [Cucumis melo] >KAA0031731.1 uncharacterized protein E6C27_scaffold139G005200 [Cucumis melo var. makuwa] >TYK11782.1 uncharacterized protein E5676_scaffold304G001110 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (293), Expect = 1.09e-28 Identity = 69/130 (53.08%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. NCBI nr
Match: KAG7032923.1 (hypothetical protein SDJN02_06974, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118 bits (295), Expect = 1.32e-28 Identity = 70/141 (49.65%), Postives = 75/141 (53.19%), Query Frame = 0
BLAST of Csor.00g124690 vs. NCBI nr
Match: XP_004140994.2 (glycosyltransferase BC10 [Cucumis sativus] >KGN46055.1 hypothetical protein Csa_005159 [Cucumis sativus]) HSP 1 Score: 115 bits (289), Expect = 4.27e-28 Identity = 68/130 (52.31%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. ExPASy TrEMBL
Match: A0A1S3C397 (uncharacterized protein LOC103496524 OS=Cucumis melo OX=3656 GN=LOC103496524 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 5.29e-29 Identity = 69/130 (53.08%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. ExPASy TrEMBL
Match: A0A5A7SQB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001110 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 5.29e-29 Identity = 69/130 (53.08%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. ExPASy TrEMBL
Match: A0A0A0K8K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046330 PE=4 SV=1) HSP 1 Score: 115 bits (289), Expect = 2.07e-28 Identity = 68/130 (52.31%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. ExPASy TrEMBL
Match: A0A6J1HBZ3 (uncharacterized protein LOC111461937 OS=Cucurbita moschata OX=3662 GN=LOC111461937 PE=4 SV=1) HSP 1 Score: 114 bits (285), Expect = 8.72e-28 Identity = 68/130 (52.31%), Postives = 71/130 (54.62%), Query Frame = 0
BLAST of Csor.00g124690 vs. ExPASy TrEMBL
Match: A0A6J1JT55 (uncharacterized protein LOC111487264 OS=Cucurbita maxima OX=3661 GN=LOC111487264 PE=4 SV=1) HSP 1 Score: 113 bits (282), Expect = 2.24e-27 Identity = 67/130 (51.54%), Postives = 70/130 (53.85%), Query Frame = 0
BLAST of Csor.00g124690 vs. TAIR 10
Match: AT3G52060.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 77.8 bits (190), Expect = 7.0e-15 Identity = 50/133 (37.59%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Csor.00g124690 vs. TAIR 10
Match: AT3G52060.2 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 77.8 bits (190), Expect = 7.0e-15 Identity = 50/133 (37.59%), Postives = 60/133 (45.11%), Query Frame = 0
BLAST of Csor.00g124690 vs. TAIR 10
Match: AT5G22070.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 72.4 bits (176), Expect = 2.9e-13 Identity = 48/137 (35.04%), Postives = 62/137 (45.26%), Query Frame = 0
BLAST of Csor.00g124690 vs. TAIR 10
Match: AT5G25330.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein ) HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04 Identity = 41/153 (26.80%), Postives = 53/153 (34.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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