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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTAATTTCAAGTTTTCCAGTTCGAGGACGCCAAGCAATATTGAGACGCACAGAGATTACTAGAAAATCACAGAACCAACGCTCGCTTCGTTCTGCTTCTCACTTTCTCCTCCAAGGTTTGTGACCTTCTCCTCCAAGATTAGTGCGATGGCTTCCTAGTTTAGATTTCTTCGATTTTAGTTCTTGATTTGATTCATCTTTTCTTCTTTTCTTTTGCTTTCGATTTTGATGAATTTGTCGCTACTGGATTGCGTTTCATATTCTTCTGCAGTGCTTCTTGGTTGAAATTTGATTGAATCTTTGCTCTGTTTGGTTCTTTTCTGTAGTTTTTTTGCTGAATATTCGTGGAATTTGTACTCTCTGCTACATTCATTTGATTGCGTACAGAAAAAGCTTGGCGTGTGTCGAATCGTTTGAAAAGGGGAAGAAAATATTGGTTGCTGAAGAATTCGCTTGA mRNA sequence ATGGTAATTTCAAGTTTTCCAGTTCGAGGACGCCAAGCAATATTGAGACGCACAGAGATTACTAGAAAATCACAGAACCAACGCTCGCTTCGTTCTGCTTCTCACTTTCTCCTCCAAGTTTTTTTGCTGAATATTCGTGGAATTTGTACTCTCTGCTACATTCATTTGATTGCGTACAGAAAAAGCTTGGCGTGTGTCGAATCGTTTGAAAAGGGGAAGAAAATATTGGTTGCTGAAGAATTCGCTTGA Coding sequence (CDS) ATGGTAATTTCAAGTTTTCCAGTTCGAGGACGCCAAGCAATATTGAGACGCACAGAGATTACTAGAAAATCACAGAACCAACGCTCGCTTCGTTCTGCTTCTCACTTTCTCCTCCAAGTTTTTTTGCTGAATATTCGTGGAATTTGTACTCTCTGCTACATTCATTTGATTGCGTACAGAAAAAGCTTGGCGTGTGTCGAATCGTTTGAAAAGGGGAAGAAAATATTGGTTGCTGAAGAATTCGCTTGA Protein sequence MVISSFPVRGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYRKSLACVESFEKGKKILVAEEFA
Homology
BLAST of Csor.00g124090 vs. NCBI nr
Match: KAG6581810.1 (hypothetical protein SDJN03_21812, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154 bits (390), Expect = 3.97e-47 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 Query: 1 MVISSFPVRGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYR 60 MVISSFPVRGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYR Sbjct: 1 MVISSFPVRGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYR 60
Query: 61 KSLACVESFEKGKKILVAEEFA 82 KSLACVESFEKGKKILVAEEFA Sbjct: 61 KSLACVESFEKGKKILVAEEFA 82
BLAST of Csor.00g124090 vs. NCBI nr
Match: KAG7018259.1 (hypothetical protein SDJN02_20127, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140 bits (352), Expect = 1.98e-41 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 Query: 9 RGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYRKSLACVES 68 RGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYRKSLACVES Sbjct: 1 RGRQAILRRTEITRKSQNQRSLRSASHFLLQVFLLNIRGICTLCYIHLIAYRKSLACVES 60
Query: 69 FEKGKKILVAEEFA 82 FEKGKKILVAEEFA Sbjct: 61 FEKGKKILVAEEFA 74
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6581810.1 | 3.97e-47 | 100.00 | hypothetical protein SDJN03_21812, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7018259.1 | 1.98e-41 | 100.00 | hypothetical protein SDJN02_20127, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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