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Csor.00g124070 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCCCCAGTTGGATGTGGAAAGGCGATAAGCCAGTCCGCCAATCGACTTGGGGCATGGACCGATGCGGATTGAGATGGCGGCCAAAGCCCAAGCCTTTGTTACGCTTGTGGAGACGTCGTCGTCTTGATCGTGGCTGGCAGCACGTGCTTTTTGGCTTGCTTTGGCATCTGCGTGCTCCTGGCATCGGCCTGTGGGCTCCCCGTTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACACGTGTGCGAGTTAACAGGCGAGTAAACCCATAAGGCGCAAGGAAGCTGACTGGTGGGATCCCTTTGTGGGTTGCACCACCCACTGACCTTGATCTTTTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCAAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTAGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGCGTGCGAGTTCTATCGGATAAAGATGTCTTAGAACCTAAAGATAGAACTGATGAGTTAGTAATCTCAAAAGAGTCGAGCCCTAAGAACTAACGACCCACGTAGAGCTAAGAGCAAAGGACTTGATAGCGTCCACAGTATTACCTTAAGTTGAGTTTGGGTGAACCAAGTTAGCCTAGGAGAGCCTAAAACTTAACTAAATAATAAAATATTCAAGCACGAACTAATAACCTACAAACAAACTACTTATTAAGTATTTTTATAATCATTCATGCTACGTTCGAGAGAGAGAGAGAGAGCGAGCGCGCATGGGGTGTAAGGGGTCGAGATAGAGTTATTATAGCATTTGTTATGTTGTCATGTTGTTTGGTAAACTGCATTCCTGTATATTTTGTACGACTAATTTAGATCAAAGACAGGTACAAGAGCATTGGGTTGCACCAATAATACGATGTATGGTTGTTGTGCCAATAGTAATTTGGAACAGTTAAGTTAGTTGGGGGATAAAACAGACTGACTTTTAATATTTTTATTTGTTAATTGTATTCAAATTTATATTAAAAATATATAAATATTTAATAGATATATAAATTCAATTTTTAAAATAAAATATATTCATAGATTAATAAATAATAATAGTAACTACCATTTATAAAATATAAATTCAACGCTGAGGAAGACTAGGTTGGGCCTTTAGAACTTAGGCCCAATATAGTACTTTTAAATGGGCCTAATAGGCCCATTTCAAAGGCCACGGTCGACGATGAAGCCGACGCTTCTCATCTCCGATTATTTTATCGAACTCTCGTTTATTCACAGTTGCAGAGCTTAGTCCTTGAAACGACCAGATCTGCATTTGTTCTCTGCGGGTTGAGAGTTCCTCACATCAACCAAACGCATCAAACTTCTCGAGATCTAATTTCCTTCACTTATTTTCATTGTAAATCAGGTAGTTTCTTCAATTCTTGCTGTTCCTTGCAACCTAGATCTGTGAAATTTCCGAATTCTAACTCTGTTTCGACTCGATTTTGTTCCCTTGATTTCATTTTGTTCAGATCTCAAACCGTGA ATGTGCCCCAGTTGGATGTGGAAAGGCGATAAGCCAGTCCGCCAATCGACTTGGGGCATGGACCGATGCGGATTGAGATGGCGGCCAAAGCCCAAGCCTTTGTTACGCTTGTGGAGACGTCGTCGTCTTGATCGTGGCTGGCAGCACTTGCAGAGCTTAGTCCTTGAAACGACCAGATCTGCATTTGTTCTCTGCGGGTTGAGAGTTCCTCACATCAACCAAACGCATCAAACTTCTCGAGATCTAATTTCCTTCACTTATTTTCATTGTAAATCAGATCTCAAACCGTGA ATGTGCCCCAGTTGGATGTGGAAAGGCGATAAGCCAGTCCGCCAATCGACTTGGGGCATGGACCGATGCGGATTGAGATGGCGGCCAAAGCCCAAGCCTTTGTTACGCTTGTGGAGACGTCGTCGTCTTGATCGTGGCTGGCAGCACTTGCAGAGCTTAGTCCTTGAAACGACCAGATCTGCATTTGTTCTCTGCGGGTTGAGAGTTCCTCACATCAACCAAACGCATCAAACTTCTCGAGATCTAATTTCCTTCACTTATTTTCATTGTAAATCAGATCTCAAACCGTGA MCPSWMWKGDKPVRQSTWGMDRCGLRWRPKPKPLLRLWRRRRLDRGWQHLQSLVLETTRSAFVLCGLRVPHINQTHQTSRDLISFTYFHCKSDLKP Homology
BLAST of Csor.00g124070 vs. NCBI nr
Match: KAG6581808.1 (hypothetical protein SDJN03_21810, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214 bits (544), Expect = 3.44e-70 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Csor.00g124070 vs. NCBI nr
Match: KAA0043506.1 (hypothetical protein E6C27_scaffold2522G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 4.84e-25 Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Csor.00g124070 vs. NCBI nr
Match: KAA0065853.1 (hypothetical protein E6C27_scaffold1843G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 1.61e-23 Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Csor.00g124070 vs. NCBI nr
Match: KDP44822.1 (hypothetical protein JCGZ_01322 [Jatropha curcas]) HSP 1 Score: 55.8 bits (133), Expect = 3.81e-07 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Csor.00g124070 vs. NCBI nr
Match: KAA3447110.1 (hypothetical protein EPI10_034370 [Gossypium australe]) HSP 1 Score: 54.3 bits (129), Expect = 4.83e-07 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
BLAST of Csor.00g124070 vs. ExPASy TrEMBL
Match: A0A5A7TN89 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2522G00010 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.34e-25 Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of Csor.00g124070 vs. ExPASy TrEMBL
Match: A0A5A7VCH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1843G00010 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.79e-24 Identity = 42/52 (80.77%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of Csor.00g124070 vs. ExPASy TrEMBL
Match: A0A067L8V2 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01322 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.85e-07 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of Csor.00g124070 vs. ExPASy TrEMBL
Match: A0A5B6TPI1 (Uncharacterized protein OS=Gossypium australe OX=47621 GN=EPI10_034370 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.34e-07 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
BLAST of Csor.00g124070 vs. ExPASy TrEMBL
Match: A0A2V3ZRG3 (Uncharacterized protein (Fragment) OS=Marinifilum breve OX=2184082 GN=DF185_22860 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.89e-07 Identity = 31/61 (50.82%), Postives = 36/61 (59.02%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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