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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGGAAGCGAGAATATGGTCAAGGAAATCCGAACGGTCGGCAACATCAAGCACCCAAACTTGATCACTTCGGAAGATTTTTGGCTGGGAAAAGCCATGCTCTATTGCTTTACAGATACCATTCTAACGGGAGCCTTTTGTGGGTACAATTGGCTACATTGCGACAGGTATCATTCTACACATATATTATGTATTACCTCTGCATGTTAATGTGTTTTTGTTTGGAAGGATTGGACCGTGTTGTGATATGTTATGTGCTTATGACAGAATTCGTTTTCGGCAGCCAAGAGAAAAAGCTTCAGATGTTTACAGTTACGGGGTGGTTTTACTCGAGCCAATAACGAGAAGGAAGCCGAGATTTGCATATGCCAAATTTGAAACGAAGTAA mRNA sequence ATGGGGAAGCGAGAATATGGTCAAGGAAATCCGAACGGTCGGCAACATCAAGCACCCAAACTTGATCACTTCGGAAGATTTTTGGCTGGGAAAAGCCATGCTCTATTGCTTTACAGATACCATTCTAACGGGAGCCTTTTGTGGGTACAATTGGCTACATTGCGACAGCCAAGAGAAAAAGCTTCAGATGTTTACAGTTACGGGGTGGTTTTACTCGAGCCAATAACGAGAAGGAAGCCGAGATTTGCATATGCCAAATTTGAAACGAAGTAA Coding sequence (CDS) ATGGGGAAGCGAGAATATGGTCAAGGAAATCCGAACGGTCGGCAACATCAAGCACCCAAACTTGATCACTTCGGAAGATTTTTGGCTGGGAAAAGCCATGCTCTATTGCTTTACAGATACCATTCTAACGGGAGCCTTTTGTGGGTACAATTGGCTACATTGCGACAGCCAAGAGAAAAAGCTTCAGATGTTTACAGTTACGGGGTGGTTTTACTCGAGCCAATAACGAGAAGGAAGCCGAGATTTGCATATGCCAAATTTGAAACGAAGTAA Protein sequence MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREKASDVYSYGVVLLEPITRRKPRFAYAKFETK
Homology
BLAST of Csor.00g124050 vs. NCBI nr
Match: KAG6581806.1 (hypothetical protein SDJN03_21808, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187 bits (475), Expect = 7.53e-60 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 Query: 1 MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREK 60 MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREK Sbjct: 1 MGKREYGQGNPNGRQHQAPKLDHFGRFLAGKSHALLLYRYHSNGSLLWVQLATLRQPREK 60
Query: 61 ASDVYSYGVVLLEPITRRKPRFAYAKFETK 90 ASDVYSYGVVLLEPITRRKPRFAYAKFETK Sbjct: 61 ASDVYSYGVVLLEPITRRKPRFAYAKFETK 90
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6581806.1 | 7.53e-60 | 100.00 | hypothetical protein SDJN03_21808, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | GENE3D | 1.10.510.10 | Transferase(Phosphotransferase) domain 1 | coord: 19..89 e-value: 9.5E-6 score: 26.7 |
IPR011009 | Protein kinase-like domain superfamily | SUPERFAMILY | 56112 | Protein kinase-like (PK-like) | coord: 19..83 |
Relationships
The following mRNA feature(s) are a part of this gene:
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