Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGCGATGACCGGCACAAATTGCAGATCTCCTCCTTTTGCCCTAAATTCTGTTACATCTCTTCAAACTAAGCCTCTGAGCGAAGTTTTTATGCTCAAACCTGCAAAATTTTCACTCAATAGAACTCTCACTCTCCAAATTACATGTTCTTTAAAGAACAACGTGGTTAGTCTCTATCCTTGTGATCTAAACTTCTTAGATCAGATCATTGTTCTTACAGTCTAGTTGATTTTGGCAGGTTTTCGAGGATCGTTCTAATGGTGTGATTTGCTACAGAGACGACGATGGAGAGATTATTTGCGAAGGATATGATGACGAAGAGCCTCGTATTGAGGAAGAGATTGAGAAATTACCTTGCGAAAAGTCTCGTCGAAGGTAGAAACCAGATCTCGATAATTTCTCGAATGAATCTAGAGGCCGCATCGTAATATATGCTTTTCTTTGTTCTGAATTCTGATTCCTGTTCTGTGTTTCCGCGGATTCTCAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTTCAGCAAAATTGGGAGAAGAGCTTAGAAACCATTAATGGCGGTGCTGGGAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTGCAGTTTGTAG
mRNA sequence
ATGGCAATGGCGATGACCGGCACAAATTGCAGATCTCCTCCTTTTGCCCTAAATTCTGTTACATCTCTTCAAACTAAGCCTCTGAGCGAAGTTTTTATGCTCAAACCTGCAAAATTTTCACTCAATAGAACTCTCACTCTCCAAATTACATGTTCTTTAAAGAACAACGTGGTTTTCGAGGATCGTTCTAATGGTGTGATTTGCTACAGAGACGACGATGGAGAGATTATTTGCGAAGGATATGATGACGAAGAGCCTCGTATTGAGGAAGAGATTGAGAAATTACCTTGCGAAAAGTCTCGTCGAAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTTCAGCAAAATTGGGAGAAGAGCTTAGAAACCATTAATGGCGGTGCTGGGAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTGCAGTTTGTAG
Coding sequence (CDS)
ATGGCAATGGCGATGACCGGCACAAATTGCAGATCTCCTCCTTTTGCCCTAAATTCTGTTACATCTCTTCAAACTAAGCCTCTGAGCGAAGTTTTTATGCTCAAACCTGCAAAATTTTCACTCAATAGAACTCTCACTCTCCAAATTACATGTTCTTTAAAGAACAACGTGGTTTTCGAGGATCGTTCTAATGGTGTGATTTGCTACAGAGACGACGATGGAGAGATTATTTGCGAAGGATATGATGACGAAGAGCCTCGTATTGAGGAAGAGATTGAGAAATTACCTTGCGAAAAGTCTCGTCGAAGATCTGATGGCGAATTGAAGATCGATCGTCTTCTCCTTCAGCAAAATTGGGAGAAGAGCTTAGAAACCATTAATGGCGGTGCTGGGAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTGCAGTTTGTAG
Protein sequence
MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWEKSLETINGGAGSGRGELRIRANGCSL
Homology
BLAST of Csor.00g123890 vs. NCBI nr
Match:
XP_022956325.1 (uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothetical protein SDJN03_21792, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 290 bits (742), Expect = 8.82e-99
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE
Sbjct: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
Query: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE
Sbjct: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
Query: 121 KSLETINGGAGSGRGELRIRANGCSL 146
KSLETINGGAGSGRGELRIRANGCSL
Sbjct: 121 KSLETINGGAGSGRGELRIRANGCSL 146
BLAST of Csor.00g123890 vs. NCBI nr
Match:
KAG7018241.1 (hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 288 bits (738), Expect = 3.59e-98
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
Query: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE
Sbjct: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
Query: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRS+GELKIDRLLLQQNWE
Sbjct: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSEGELKIDRLLLQQNWE 120
Query: 121 KSLETINGGAGSGRGELRIRANGCSL 146
KSLETINGGAGSGRGELRIRANGCSL
Sbjct: 121 KSLETINGGAGSGRGELRIRANGCSL 146
BLAST of Csor.00g123890 vs. NCBI nr
Match:
XP_022980749.1 (uncharacterized protein LOC111480023 [Cucurbita maxima])
HSP 1 Score: 281 bits (720), Expect = 2.00e-95
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0
Query: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
M MAMTGTNCRSPPFALNS TSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE
Sbjct: 1 MTMAMTGTNCRSPPFALNSATSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
Query: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
DRSNGVICYRDDDGEIICEGYDDEEPRIE+EIEKLPCEKSRRRSDGELKIDRLLLQQNWE
Sbjct: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
Query: 121 KSLETINGGAGSGRGELRIRANGCSL 146
KSLETINGGAGSGRGELRIRANG SL
Sbjct: 121 KSLETINGGAGSGRGELRIRANGFSL 146
BLAST of Csor.00g123890 vs. NCBI nr
Match:
XP_023526222.1 (uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 280 bits (716), Expect = 8.72e-95
Identity = 143/148 (96.62%), Postives = 144/148 (97.30%), Query Frame = 0
Query: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
MAMAM GTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRT TLQITCSLKNNVVFE
Sbjct: 1 MAMAMIGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTFTLQITCSLKNNVVFE 60
Query: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
DRSNGVICYRDDDGEIICEGYDDEEPRIE+EIEKLPCEKSRRRSDGELKIDRLLLQQNWE
Sbjct: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
Query: 121 KSLETINGGAGSG--RGELRIRANGCSL 146
KSLETINGGAGSG RGELRIRANGCSL
Sbjct: 121 KSLETINGGAGSGSGRGELRIRANGCSL 148
BLAST of Csor.00g123890 vs. NCBI nr
Match:
XP_038900432.1 (uncharacterized protein LOC120087657 [Benincasa hispida])
HSP 1 Score: 223 bits (568), Expect = 2.78e-72
Identity = 117/144 (81.25%), Postives = 127/144 (88.19%), Query Frame = 0
Query: 5 MTGTNCRSPPFALNSVTSLQTKPLSEVFML-KPAKFSLNRTLTLQITCSLKNNVVFEDRS 64
M TNCRSP S+TSLQTKPLS+ FML KPAK S+NRTLTLQIT S+KNN+VFEDRS
Sbjct: 1 MAATNCRSPLLPRKSITSLQTKPLSKTFMLFKPAKVSVNRTLTLQITSSVKNNLVFEDRS 60
Query: 65 NGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRR-SDGELKIDRLLLQQNWEKS 124
NGVICYRD+DGEIICEGYDDE+PRIE+EIEKLPCEKSRRR SD E ++DRLLLQQNWEK
Sbjct: 61 NGVICYRDEDGEIICEGYDDEKPRIEQEIEKLPCEKSRRRRSDRESEMDRLLLQQNWEKR 120
Query: 125 LETINGGAGSGRGELRIRANGCSL 146
LE INGGAGSGRGELRIRANG SL
Sbjct: 121 LEAINGGAGSGRGELRIRANGYSL 144
BLAST of Csor.00g123890 vs. ExPASy TrEMBL
Match:
A0A6J1GXI0 (uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC111458058 PE=4 SV=1)
HSP 1 Score: 290 bits (742), Expect = 4.27e-99
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE
Sbjct: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
Query: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE
Sbjct: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
Query: 121 KSLETINGGAGSGRGELRIRANGCSL 146
KSLETINGGAGSGRGELRIRANGCSL
Sbjct: 121 KSLETINGGAGSGRGELRIRANGCSL 146
BLAST of Csor.00g123890 vs. ExPASy TrEMBL
Match:
A0A6J1J044 (uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023 PE=4 SV=1)
HSP 1 Score: 281 bits (720), Expect = 9.68e-96
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0
Query: 1 MAMAMTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
M MAMTGTNCRSPPFALNS TSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE
Sbjct: 1 MTMAMTGTNCRSPPFALNSATSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFE 60
Query: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
DRSNGVICYRDDDGEIICEGYDDEEPRIE+EIEKLPCEKSRRRSDGELKIDRLLLQQNWE
Sbjct: 61 DRSNGVICYRDDDGEIICEGYDDEEPRIEQEIEKLPCEKSRRRSDGELKIDRLLLQQNWE 120
Query: 121 KSLETINGGAGSGRGELRIRANGCSL 146
KSLETINGGAGSGRGELRIRANG SL
Sbjct: 121 KSLETINGGAGSGRGELRIRANGFSL 146
BLAST of Csor.00g123890 vs. ExPASy TrEMBL
Match:
A0A5D3D6I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00800 PE=4 SV=1)
HSP 1 Score: 206 bits (525), Expect = 4.48e-66
Identity = 107/142 (75.35%), Postives = 116/142 (81.69%), Query Frame = 0
Query: 5 MTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDRSN 64
M TN RSP L S TSLQTKPL+ +FMLKP K S+NRTLTLQIT LKNN+VFEDRSN
Sbjct: 1 MAATNHRSPLLPLKSFTSLQTKPLTNLFMLKPPKISVNRTLTLQITSCLKNNLVFEDRSN 60
Query: 65 GVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWEKSLE 124
GVICYRDDDGEIICEGYDDEE IEEE+EKLPCEKS R DGE+K DRLLLQ WEK LE
Sbjct: 61 GVICYRDDDGEIICEGYDDEEIHIEEEMEKLPCEKSDGRRDGEMKTDRLLLQTIWEKQLE 120
Query: 125 TINGGAGSGRGELRIRANGCSL 146
+INGG GSGRGE+ I ANG +L
Sbjct: 121 SINGGGGSGRGEIPIGANGYNL 142
BLAST of Csor.00g123890 vs. ExPASy TrEMBL
Match:
A0A1S3CC94 (uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499196 PE=4 SV=1)
HSP 1 Score: 206 bits (525), Expect = 4.48e-66
Identity = 107/142 (75.35%), Postives = 116/142 (81.69%), Query Frame = 0
Query: 5 MTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDRSN 64
M TN RSP L S TSLQTKPL+ +FMLKP K S+NRTLTLQIT LKNN+VFEDRSN
Sbjct: 1 MAATNHRSPLLPLKSFTSLQTKPLTNLFMLKPPKISVNRTLTLQITSCLKNNLVFEDRSN 60
Query: 65 GVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWEKSLE 124
GVICYRDDDGEIICEGYDDEE IEEE+EKLPCEKS R DGE+K DRLLLQ WEK LE
Sbjct: 61 GVICYRDDDGEIICEGYDDEEIHIEEEMEKLPCEKSDGRRDGEMKTDRLLLQTIWEKQLE 120
Query: 125 TINGGAGSGRGELRIRANGCSL 146
+INGG GSGRGE+ I ANG +L
Sbjct: 121 SINGGGGSGRGEIPIGANGYNL 142
BLAST of Csor.00g123890 vs. ExPASy TrEMBL
Match:
A0A0A0LCR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646590 PE=4 SV=1)
HSP 1 Score: 203 bits (516), Expect = 1.05e-64
Identity = 106/142 (74.65%), Postives = 114/142 (80.28%), Query Frame = 0
Query: 5 MTGTNCRSPPFALNSVTSLQTKPLSEVFMLKPAKFSLNRTLTLQITCSLKNNVVFEDRSN 64
M TN RSP L S TSLQ KPL +FMLK K S+NR L LQIT SLKNN+VFEDRSN
Sbjct: 1 MAATNHRSPLLPLKSFTSLQPKPLGNIFMLKTPKISVNRPLALQITSSLKNNLVFEDRSN 60
Query: 65 GVICYRDDDGEIICEGYDDEEPRIEEEIEKLPCEKSRRRSDGELKIDRLLLQQNWEKSLE 124
GVICYRDDDGEIICEGYDDEE IEEEIEKLPCEK R DGE+K+DRLLLQ WEK LE
Sbjct: 61 GVICYRDDDGEIICEGYDDEEIHIEEEIEKLPCEKPDGRRDGEVKMDRLLLQTIWEKQLE 120
Query: 125 TINGGAGSGRGELRIRANGCSL 146
+INGGAGSGRGE+RI ANG +L
Sbjct: 121 SINGGAGSGRGEIRIGANGYNL 142
BLAST of Csor.00g123890 vs. TAIR 10
Match:
AT3G14280.1 (unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 50.1 bits (118), Expect = 1.8e-06
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0
Query: 56 NVVFEDRSNGVICYRDDDGEIICEGYDDEEPR 88
N+VFED G+ICY DD+GE+ICEGY DE PR
Sbjct: 54 NIVFEDPIQGIICYTDDNGEVICEGY-DEGPR 84
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022956325.1 | 8.82e-99 | 100.00 | uncharacterized protein LOC111458058 [Cucurbita moschata] >KAG6581790.1 hypothet... | [more] |
KAG7018241.1 | 3.59e-98 | 99.32 | hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
XP_022980749.1 | 2.00e-95 | 97.26 | uncharacterized protein LOC111480023 [Cucurbita maxima] | [more] |
XP_023526222.1 | 8.72e-95 | 96.62 | uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo] | [more] |
XP_038900432.1 | 2.78e-72 | 81.25 | uncharacterized protein LOC120087657 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GXI0 | 4.27e-99 | 100.00 | uncharacterized protein LOC111458058 OS=Cucurbita moschata OX=3662 GN=LOC1114580... | [more] |
A0A6J1J044 | 9.68e-96 | 97.26 | uncharacterized protein LOC111480023 OS=Cucurbita maxima OX=3661 GN=LOC111480023... | [more] |
A0A5D3D6I4 | 4.48e-66 | 75.35 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CC94 | 4.48e-66 | 75.35 | uncharacterized protein LOC103499196 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A0A0LCR0 | 1.05e-64 | 74.65 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646590 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G14280.1 | 1.8e-06 | 68.75 | unknown protein; Has 51 Blast hits to 51 proteins in 13 species: Archae - 0; Bac... | [more] |