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Csor.00g123670 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCAACCCTATGAGCCAGAAGAAGGGCAGCCTGGGGCGGGACTGCGGCGGGGGACACGTCGGGGGATGCGGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTTGGGGGGAAGAGATCGGGGCGGCTTGTGGCGTGGGGGAGGATGCTGAGGAAGATAAGGCTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATGAAAGAATACTACACAAGGTTGATGAAGGATATCATAGAGGCAGGAGCCTATGCTCACTCTTATCAACATAGGGTTCTCTTGGAGACTTCTTTTGCCATTCCAATTCTCGGTGTCTCGCTCTCTACTCATTCCAGTGTTCTAGCTGCCACTTCGTAA ATGGGTCAACCCTATGAGCCAGAAGAAGGGCAGCCTGGGGCGGGACTGCGGCGGGGGACACGTCGGGGGATGCGGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTTGGGGGGAAGAGATCGGGGCGGCTTGTGGCGTGGGGGAGGATGCTGAGGAAGATAAGGCTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATGAAAGAATACTACACAAGGTTGATGAAGGATATCATAGAGGCAGGAGCCTATGCTCACTCTTATCAACATAGGGTTCTCTTGGAGACTTCTTTTGCCATTCCAATTCTCGGTGTCTCGCTCTCTACTCATTCCAGTGTTCTAGCTGCCACTTCGTAA ATGGGTCAACCCTATGAGCCAGAAGAAGGGCAGCCTGGGGCGGGACTGCGGCGGGGGACACGTCGGGGGATGCGGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTTGGGGGGAAGAGATCGGGGCGGCTTGTGGCGTGGGGGAGGATGCTGAGGAAGATAAGGCTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATGAAAGAATACTACACAAGGTTGATGAAGGATATCATAGAGGCAGGAGCCTATGCTCACTCTTATCAACATAGGGTTCTCTTGGAGACTTCTTTTGCCATTCCAATTCTCGGTGTCTCGCTCTCTACTCATTCCAGTGTTCTAGCTGCCACTTCGTAA MGQPYEPEEGQPGAGLRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVKLKCIAMVKKMKEYYTRLMKDIIEAGAYAHSYQHRVLLETSFAIPILGVSLSTHSSVLAATS Homology
BLAST of Csor.00g123670 vs. NCBI nr
Match: KAG6581768.1 (hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231 bits (590), Expect = 2.09e-76 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Csor.00g123670 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata]) HSP 1 Score: 221 bits (564), Expect = 2.20e-72 Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of Csor.00g123670 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218 bits (556), Expect = 2.81e-71 Identity = 117/121 (96.69%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of Csor.00g123670 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida]) HSP 1 Score: 187 bits (474), Expect = 1.12e-58 Identity = 100/124 (80.65%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of Csor.00g123670 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166 bits (421), Expect = 1.25e-50 Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Csor.00g123670 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 221 bits (564), Expect = 1.06e-72 Identity = 119/125 (95.20%), Postives = 120/125 (96.00%), Query Frame = 0
BLAST of Csor.00g123670 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1) HSP 1 Score: 166 bits (421), Expect = 6.05e-51 Identity = 93/122 (76.23%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Csor.00g123670 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 4.70e-43 Identity = 80/102 (78.43%), Postives = 92/102 (90.20%), Query Frame = 0
BLAST of Csor.00g123670 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 4.85e-43 Identity = 79/104 (75.96%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of Csor.00g123670 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1) HSP 1 Score: 123 bits (308), Expect = 2.03e-33 Identity = 78/121 (64.46%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of Csor.00g123670 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 9.0e-12 Identity = 42/101 (41.58%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Csor.00g123670 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 37/93 (39.78%), Postives = 61/93 (65.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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