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Csor.00g123610 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTCTCTCTCTCCAAATCCCGATCCCTAACCCTAACCCTAACCCTAAATCTCCTTCGTCCTCGTCTATCTCCCCTTCAATCTCTCGACCGCCGTACGTTCTCCTCCTCTCCTGACAACGATCTCACTGACCTCTCTGAATCTCCTTCCTCCGATCCCCTGCTCCGGAACCTTGAGGACGCTATTCAACGGATCCTTGTTCGCCGGTCGGCTCCCGACTGGCTCCCCTTCGTTCCCGGTGCTTCATATTGGGTTCCCTTGCCTTCTACTTCCCATTTGCCTCCCATCGCTAACCTTCTTCACAACTTCGCTAACCCTCTCTCTCCAGAGCAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCTTCTTCTCATTTCTTCATTCAAGGTTTTGCTCTTCTTTCGTTGCGTTTTCATTTTGAATTTATTCTTTTTTTTTTTTTTTTTTTATGTATATATAATTTTCTTCGTGATAGGTGCCCATCTGCCTTCTCTTGAGCCGGAGGTTGAGACCAATTCGGCTGAATGTGAGGCTTCCCAACACTCTGACCATGAGGAAACCTGAGAGCTTTCTGCTTTCCCTAATAAATTGGCAGCTGATCTGGGTTCGTGCTTATTATTTCTTATATTAAACTCGTTTCTGCCGTTATGATGAATTCTGAATTATATATTATCTTACCTCATAAGTTATTTATATACGTATATTGAGGTTGAAAGTTCCTTTGATGTGGGTTAATATGTATAAAATTAACACCCTTCGGATTGTCAAGTATTCTACTCTCGTTTGATAACGTATTCTACTCCTTTTTCTCTCACTCCATATTGTAATGAGAAACATCGTTGTCGTCTCAAACAGTGATAACACATTGTATACCCATATGATGGATTCCAAATCAATGAACTAGGAGGGAGGGCCGGAAAGTATTCTAGAGATTGATATATGTGGGAGTGATTTCCAAAATTGTTGTTTGCATCGCTTTATGGTGAGGAAGATAAGTTTTCAACTTCTAACGCTTTAGTGCGCAGCTTGTGTGGTGGTGTTTAAAACCTTGTGTAATTATTGGAAGATCATTCTTTTGTATCTTTGTTGGGGTACCCTCTACTCGATCCTTAGCCTGTTTCCTATCCTCTTTTGATTATATATACTCGTTTCTTAAAAAATTGTGGTTTACATATTTTGATCGAAGAAACTATTCATATTGCTAGTGCAACGGTGTGAGCTTTTGAAGATTTTTTTTTTTTTTAAGTTGGTCAGGGCGTCTATTGTAAGTTGTTCTTTATGTTTCAAAATTAGGGAAACGATAATTAGAAATTCCATGGCAACACATAATTAGTGGTTCTTAAATCGGCGAGTGGAGAATGTTCTCAATTTTTCTCTCTGTTGGAAATTATATTGTATTGTAATTTACGGAATTAGTTTTTGCATTCTTCATTGTGGTTGGAAATTTCTAGTGTTCTGGAAGGATTTCATAATCTGAGGTATGCATCCTTTGGTGCTAAGCTTCCACCATTCATGATTATGTCGTGAATGTAAATTGCTTTCTAATCTTTGACTCAGCCCATGATTTTGATTGGGAGAGAGTTTGGAAGGAATTTAAACTTTCAAGGTTCATTTATTGGTCATTAATTGAGAAGTGAATAACGTGTTTTGCACAACTATTTGCAGCTCGACCTGCCTTGTAA ATGTCTCTCTCTCTCTCCAAATCCCGATCCCTAACCCTAACCCTAACCCTAAATCTCCTTCGTCCTCGTCTATCTCCCCTTCAATCTCTCGACCGCCGTACGTTCTCCTCCTCTCCTGACAACGATCTCACTGACCTCTCTGAATCTCCTTCCTCCGATCCCCTGCTCCGGAACCTTGAGGACGCTATTCAACGGATCCTTGTTCGCCGGTCGGCTCCCGACTGGCTCCCCTTCGTTCCCGGTGCTTCATATTGGGTTCCCTTGCCTTCTACTTCCCATTTGCCTCCCATCGCTAACCTTCTTCACAACTTCGCTAACCCTCTCTCTCCAGAGCAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCTTCTTCTCATTTCTTCATTCAAGGTGCCCATCTGCCTTCTCTTGAGCCGGAGGTTGAGACCAATTCGGCTGAATCTGATCTGGCTCGACCTGCCTTGTAA ATGTCTCTCTCTCTCTCCAAATCCCGATCCCTAACCCTAACCCTAACCCTAAATCTCCTTCGTCCTCGTCTATCTCCCCTTCAATCTCTCGACCGCCGTACGTTCTCCTCCTCTCCTGACAACGATCTCACTGACCTCTCTGAATCTCCTTCCTCCGATCCCCTGCTCCGGAACCTTGAGGACGCTATTCAACGGATCCTTGTTCGCCGGTCGGCTCCCGACTGGCTCCCCTTCGTTCCCGGTGCTTCATATTGGGTTCCCTTGCCTTCTACTTCCCATTTGCCTCCCATCGCTAACCTTCTTCACAACTTCGCTAACCCTCTCTCTCCAGAGCAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCTTCTTCTCATTTCTTCATTCAAGGTGCCCATCTGCCTTCTCTTGAGCCGGAGGTTGAGACCAATTCGGCTGAATCTGATCTGGCTCGACCTGCCTTGTAA MSLSLSKSRSLTLTLTLNLLRPRLSPLQSLDRRTFSSSPDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLSTTTVRGWPSSHFFIQGAHLPSLEPEVETNSAESDLARPAL Homology
BLAST of Csor.00g123610 vs. NCBI nr
Match: KAG6581762.1 (hypothetical protein SDJN03_21764, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305 bits (780), Expect = 2.78e-104 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of Csor.00g123610 vs. NCBI nr
Match: KAG7018211.1 (hypothetical protein SDJN02_20079, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291 bits (745), Expect = 6.95e-99 Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0
BLAST of Csor.00g123610 vs. NCBI nr
Match: XP_022956127.1 (uncharacterized protein LOC111457911 isoform X2 [Cucurbita moschata]) HSP 1 Score: 288 bits (738), Expect = 8.11e-98 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Csor.00g123610 vs. NCBI nr
Match: XP_022956126.1 (uncharacterized protein LOC111457911 isoform X1 [Cucurbita moschata]) HSP 1 Score: 288 bits (738), Expect = 1.03e-97 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Csor.00g123610 vs. NCBI nr
Match: XP_022980734.1 (uncharacterized protein LOC111480015 isoform X2 [Cucurbita maxima]) HSP 1 Score: 276 bits (707), Expect = 4.95e-93 Identity = 143/156 (91.67%), Postives = 147/156 (94.23%), Query Frame = 0
BLAST of Csor.00g123610 vs. ExPASy TrEMBL
Match: A0A6J1GVG9 (uncharacterized protein LOC111457911 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457911 PE=4 SV=1) HSP 1 Score: 288 bits (738), Expect = 3.93e-98 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Csor.00g123610 vs. ExPASy TrEMBL
Match: A0A6J1GVQ5 (uncharacterized protein LOC111457911 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457911 PE=4 SV=1) HSP 1 Score: 288 bits (738), Expect = 5.00e-98 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Csor.00g123610 vs. ExPASy TrEMBL
Match: A0A6J1J031 (uncharacterized protein LOC111480015 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480015 PE=4 SV=1) HSP 1 Score: 276 bits (707), Expect = 2.40e-93 Identity = 143/156 (91.67%), Postives = 147/156 (94.23%), Query Frame = 0
BLAST of Csor.00g123610 vs. ExPASy TrEMBL
Match: A0A6J1J062 (uncharacterized protein LOC111480015 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480015 PE=4 SV=1) HSP 1 Score: 276 bits (707), Expect = 3.05e-93 Identity = 143/156 (91.67%), Postives = 147/156 (94.23%), Query Frame = 0
BLAST of Csor.00g123610 vs. ExPASy TrEMBL
Match: A0A0A0K9L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1) HSP 1 Score: 221 bits (563), Expect = 1.40e-71 Identity = 121/151 (80.13%), Postives = 127/151 (84.11%), Query Frame = 0
BLAST of Csor.00g123610 vs. TAIR 10
Match: AT1G78890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25 Identity = 72/147 (48.98%), Postives = 95/147 (64.63%), Query Frame = 0
BLAST of Csor.00g123610 vs. TAIR 10
Match: AT1G16840.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 9.1e-25 Identity = 74/149 (49.66%), Postives = 94/149 (63.09%), Query Frame = 0
BLAST of Csor.00g123610 vs. TAIR 10
Match: AT1G16840.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 9.1e-25 Identity = 74/149 (49.66%), Postives = 94/149 (63.09%), Query Frame = 0
BLAST of Csor.00g123610 vs. TAIR 10
Match: AT1G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 9.1e-25 Identity = 74/149 (49.66%), Postives = 94/149 (63.09%), Query Frame = 0
BLAST of Csor.00g123610 vs. TAIR 10
Match: AT1G16840.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23 Identity = 70/137 (51.09%), Postives = 90/137 (65.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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