Csor.00g123420 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGATTGTCAATTTCAAGTCTCTGTGTTTTGGTGGCGGCGGCGGTGACGATGGCGCTTCTCACTGGTGCTCCGGTGGCCGATGCGGTGGACTGCAACCCTTCGGAGCTCAGCCCATGTCTTCCTGCAATTACGTCATCGACACCGCCGACGAGCTCTTGTTGCCAGAAGATGGTTGAGCAGACGCCGTGCCTTTGCGGATACTTCAAGAATCCAGAATTCAAGCCTTACGTTACTGGCGGCAAACGGGTTGCTGCTGCTTGCGGCCTCACCGTTCCTGAGTGTTAG ATGAAGAGATTGTCAATTTCAAGTCTCTGTGTTTTGGTGGCGGCGGCGGTGACGATGGCGCTTCTCACTGGTGCTCCGGTGGCCGATGCGGTGGACTGCAACCCTTCGGAGCTCAGCCCATGTCTTCCTGCAATTACGTCATCGACACCGCCGACGAGCTCTTGTTGCCAGAAGATGGTTGAGCAGACGCCGTGCCTTTGCGGATACTTCAAGAATCCAGAATTCAAGCCTTACGTTACTGGCGGCAAACGGGTTGCTGCTGCTTGCGGCCTCACCGTTCCTGAGTGTTAG ATGAAGAGATTGTCAATTTCAAGTCTCTGTGTTTTGGTGGCGGCGGCGGTGACGATGGCGCTTCTCACTGGTGCTCCGGTGGCCGATGCGGTGGACTGCAACCCTTCGGAGCTCAGCCCATGTCTTCCTGCAATTACGTCATCGACACCGCCGACGAGCTCTTGTTGCCAGAAGATGGTTGAGCAGACGCCGTGCCTTTGCGGATACTTCAAGAATCCAGAATTCAAGCCTTACGTTACTGGCGGCAAACGGGTTGCTGCTGCTTGCGGCCTCACCGTTCCTGAGTGTTAG MKRLSISSLCVLVAAAVTMALLTGAPVADAVDCNPSELSPCLPAITSSTPPTSSCCQKMVEQTPCLCGYFKNPEFKPYVTGGKRVAAACGLTVPEC Homology
BLAST of Csor.00g123420 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 5.9e-19 Identity = 46/96 (47.92%), Postives = 63/96 (65.62%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.2e-14 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.5e-14 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07 Identity = 30/92 (32.61%), Postives = 46/92 (50.00%), Query Frame = 0
BLAST of Csor.00g123420 vs. NCBI nr
Match: KAG6581743.1 (hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (490), Expect = 5.99e-62 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of Csor.00g123420 vs. NCBI nr
Match: XP_022955891.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata]) HSP 1 Score: 190 bits (482), Expect = 9.95e-61 Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Csor.00g123420 vs. NCBI nr
Match: XP_023527040.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187 bits (474), Expect = 1.65e-59 Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Csor.00g123420 vs. NCBI nr
Match: OAY60437.1 (hypothetical protein MANES_01G112500v8 [Manihot esculenta]) HSP 1 Score: 106 bits (264), Expect = 1.76e-27 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of Csor.00g123420 vs. NCBI nr
Match: KAA0064159.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02870.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 106 bits (264), Expect = 2.03e-27 Identity = 52/102 (50.98%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy TrEMBL
Match: A0A6J1GV37 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457740 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 4.82e-61 Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy TrEMBL
Match: A0A0A0L0Z5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G135200 PE=4 SV=1) HSP 1 Score: 116 bits (291), Expect = 6.60e-32 Identity = 61/97 (62.89%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy TrEMBL
Match: A0A2C9WL84 (AAI domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G112500 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 8.51e-28 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy TrEMBL
Match: A0A5A7VF50 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00770 PE=4 SV=1) HSP 1 Score: 106 bits (264), Expect = 9.83e-28 Identity = 52/102 (50.98%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Csor.00g123420 vs. ExPASy TrEMBL
Match: A0A0A0KW09 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 105 bits (262), Expect = 1.98e-27 Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of Csor.00g123420 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-17 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of Csor.00g123420 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 0
BLAST of Csor.00g123420 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 9.0e-15 Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Csor.00g123420 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 6.5e-13 Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of Csor.00g123420 vs. TAIR 10
Match: AT2G14846.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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