Csor.00g123350 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g123350
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor TCP17-like isoform X1
Location	Csor_Chr14: 11201435 .. 11202945 (+)
RNA-Seq Expression	Csor.00g123350
Synteny	Csor.00g123350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATGGTCGGCTGAATTCCAGCATCTTCCTTTTGTCTTCTTTTTTCCTTTTTTCTGAACCGGGTTTTAGCTACATATCAAGTTGGATACTTGATTGAAAAACAAAACCACTATGCTGCAGCTTACAGGATTGAAGCTCTTCCCCTCATCAATTTGAGAACTTCAATTGCATCTCCAAGCTGCTACAAGCTCAACCACATCAAAGGGGTATCAGTTCTTATGCGTAAGTTTTAATCCACTTTTTGTATCTTCAACTTCATGTTTTCTTCTGCTTTATCTAAATTGAGCTTCAAAAATCACTCACAGATCTTGTTTCAACACATAATTCGTTGAATCAGTACATAAAGATGAGAACTTTAAGAAAAAACTTGCACGATTTTTGGTCTTTTTTTCTAAAATTTAATTGAACAAACAAATCCCTTTTGGGGTTTGAAGTAAACTTGCAGGATCTTGCATCTTTTGAACATTTTCAAGAAATGGAATTCTTGTTAGGGTTTGTGGGTTTGTGGGTTTGTGGGTTTGTGGGTTTGTCCAATTTCTTCAACTCAAAAAAATTTGACACAAAATTTGAGGGTTTTGTTTGATAAGGTAATGCTAATGAATTGCAAAAAATGTACAAATTATTTTAGCTGCAGGCAAACATGATGAGAGACATACTATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGGTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCGCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA

mRNA sequence

ATGGAGGATGCTTACAGGATTGAAGCTCTTCCCCTCATCAATTTGAGAACTTCAATTGCATCTCCAAGCTGCTACAAGCTCAACCACATCAAAGGGGTATCAGTTCTTATGCCTGCAGGCAAACATGATGAGAGACATACTATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGGTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCGCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA

Coding sequence (CDS)

ATGGAGGATGCTTACAGGATTGAAGCTCTTCCCCTCATCAATTTGAGAACTTCAATTGCATCTCCAAGCTGCTACAAGCTCAACCACATCAAAGGGGTATCAGTTCTTATGCCTGCAGGCAAACATGATGAGAGACATACTATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGGTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCGCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA

Protein sequence

MEDAYRIEALPLINLRTSIASPSCYKLNHIKGVSVLMPAGKHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE

Homology

[Close]

BLAST of Csor.00g123350 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.3e-37
Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 100
           K D+  T +  +  +    K   S SSS   ++ W++ KDPRIVRVSRAFGGKDRHSKVC
Sbjct: 26  KEDQEETEVRATSGKTVIKKQPTSISSS---SSSWMKSKDPRIVRVSRAFGGKDRHSKVC 85

Query: 101 TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 160
           T+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+ AK+EIDELPPLPI   + 
Sbjct: 86  TLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF 145

Query: 161 GL--HYQSML-----PPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSN 204
            +  H+QS L     P     +  FKIN  + K      +E  + K  ++
Sbjct: 146 SIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKSTTTSREENDREKGEND 192

[Close]

BLAST of Csor.00g123350 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.2e-32
Identity = 72/127 (56.69%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 37  MPAGKHDERHTMITNSKEENSPPK------LVASSSSSAAVATPWL-RLKDPRIVRVSRA 96
           M +G+ DE        +++N   +      L     SS + +  W    ++PRIVRVSR 
Sbjct: 1   MRSGECDEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRT 60

Query: 97  FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDE 156
           FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQDRLGL+QPSKV+DWLL  AKD++D+
Sbjct: 61  FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDK 120

[Close]

BLAST of Csor.00g123350 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-28
Identity = 94/214 (43.93%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 77  RLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVV 136
           R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+RLGL+QPSKV+
Sbjct: 18  RWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVI 77

Query: 137 DWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSE-FKINSGIDKVEIDDDDEQ 196
           DWLL VAK+++D LPPL  P    G H    L P++    E F     + + + +  D +
Sbjct: 78  DWLLEVAKNDVDLLPPLQFPP---GFH---QLNPNLTGLGESFPGVFDLGRTQREALDLE 137

Query: 197 KQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSSTTNL--PFFTSQAEDLH-NFN 256
           K+   N         L++V       H D     S+S  +  L  P  TS +   H N  
Sbjct: 138 KRKWVN---------LDHVFD-----HIDHHNHFSNSIQSNKLYFPTITSSSSSYHYNLG 197

Query: 257 HVTPLSL-STGSQFLEFNNHLHQNFFINNSLNTP 286
           H+    L  +G+  + F+N+     + NN+LN P
Sbjct: 198 HLQQSLLDQSGNVTVAFSNN-----YNNNNLNPP 206

[Close]

BLAST of Csor.00g123350 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.9e-23
Identity = 98/291 (33.68%), Postives = 135/291 (46.39%), Query Frame = 0


Query: 54  EENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLS 113
           +E    KL   S  +  +   W      RI+RVSRA GGKDRHSKV T +GLRDRR+RLS
Sbjct: 13  QEQQSRKLQRFSEDNTGLMRNW-NNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLS 72

Query: 114 VSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIA 173
           V+TAIQ YDLQDRLG +QPSK V+WL+N A D I +LP L      L  +         +
Sbjct: 73  VATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQNQTKSACSS 132

Query: 174 HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP---------SSFSALL-NNVSAPPFGFHW 233
             SE  + S + + EI     ++  +  +           SSF+ LL       P   +W
Sbjct: 133 GTSESSLLS-LSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPSNRNW 192

Query: 234 DPSAS----------SSSSSSTTNLPFF--------TSQAEDLHNFNHVTPLSLSTGSQ- 293
              +           +SSS    N PF          S +    N  + +  +L + SQ 
Sbjct: 193 TGGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQS 252

Query: 294 -FLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNN 315
            FL  NN++ Q   I++S ++  PM S      +   F MAT     H N+
Sbjct: 253 LFLNNNNNITQRSSISSSSSSSSPMDS------QSISFFMATPPPLDHHNH 295

[Close]

BLAST of Csor.00g123350 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-22
Identity = 53/72 (73.61%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 82  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 141
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSVSTA+Q YDLQDRLG +QPSK V+WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 142 VAKDEIDELPPL 154
            A+D I ELP L
Sbjct: 92  AAEDSISELPSL 103

[Close]

BLAST of Csor.00g123350 vs. NCBI nr
Match: KAG6581736.1 (Transcription factor TCP13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 652 bits (1682), Expect = 5.44e-236
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MEDAYRIEALPLINLRTSIASPSCYKLNHIKGVSVLMPAGKHDERHTMITNSKEENSPPK 60
           MEDAYRIEALPLINLRTSIASPSCYKLNHIKGVSVLMPAGKHDERHTMITNSKEENSPPK
Sbjct: 1   MEDAYRIEALPLINLRTSIASPSCYKLNHIKGVSVLMPAGKHDERHTMITNSKEENSPPK 60

Query: 61  LVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQL 120
           LVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQL
Sbjct: 61  LVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQL 120

Query: 121 YDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKI 180
           YDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKI
Sbjct: 121 YDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKI 180

Query: 181 NSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSSTTNLPF 240
           NSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSSTTNLPF
Sbjct: 181 NSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSSTTNLPF 240

Query: 241 FTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFH 300
           FTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFH
Sbjct: 241 FTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFH 300

Query: 301 FSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           FSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 301 FSMATKFVAQHKNNNGDPANKEDGFGSDE 329

[Close]

BLAST of Csor.00g123350 vs. NCBI nr
Match: XP_022955449.1 (transcription factor TCP17-like isoform X1 [Cucurbita moschata] >KAG7011073.1 Transcription factor TCP13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 575 bits (1482), Expect = 4.67e-206
Identity = 291/295 (98.64%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 37  MPAGKHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRH 96
           MPAGKHDERHTMITNSKEENSPPKLVASSSSSAA+ATPWLRLKDPRIVRVSRAFGGKDRH
Sbjct: 1   MPAGKHDERHTMITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRH 60

Query: 97  SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP 156
           SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP
Sbjct: 61  SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP 120

Query: 157 SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSA 216
           SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSA
Sbjct: 121 SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSA 180

Query: 217 PPFGFHWDPSASSSSSSS--TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 276
           PPFGFHWDPS+SSSSSSS  TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ
Sbjct: 181 PPFGFHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 240

Query: 277 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 241 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 295

[Close]

BLAST of Csor.00g123350 vs. NCBI nr
Match: XP_023527017.1 (transcription factor TCP17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574 bits (1479), Expect = 1.34e-205
Identity = 291/295 (98.64%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 37  MPAGKHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRH 96
           MPAGKHDERHTMITNSKEENSPPKL ASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRH
Sbjct: 1   MPAGKHDERHTMITNSKEENSPPKLAASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRH 60

Query: 97  SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP 156
           SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP
Sbjct: 61  SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP 120

Query: 157 SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDD--EQKQHKSNSNPSSFSALLNNV 216
           SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDD  EQKQHKSNSNPSSFSALLNNV
Sbjct: 121 SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDDDEQKQHKSNSNPSSFSALLNNV 180

Query: 217 SAPPFGFHWDPSASSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 276
           SAPPFGFHWDPS SSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ
Sbjct: 181 SAPPFGFHWDPSLSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 240

Query: 277 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 241 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 295

[Close]

BLAST of Csor.00g123350 vs. NCBI nr
Match: XP_022955450.1 (transcription factor TCP17-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 566 bits (1460), Expect = 9.78e-203
Identity = 287/291 (98.63%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 100
           KHDERHTMITNSKEENSPPKLVASSSSSAA+ATPWLRLKDPRIVRVSRAFGGKDRHSKVC
Sbjct: 3   KHDERHTMITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVC 62

Query: 101 TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 160
           TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL
Sbjct: 63  TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 122

Query: 161 GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFG 220
           GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFG
Sbjct: 123 GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFG 182

Query: 221 FHWDPSASSSSSSS--TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 280
           FHWDPS+SSSSSSS  TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI
Sbjct: 183 FHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 242

Query: 281 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 243 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 293

[Close]

BLAST of Csor.00g123350 vs. NCBI nr
Match: XP_023527016.1 (transcription factor TCP17-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565 bits (1457), Expect = 2.80e-202
Identity = 287/291 (98.63%), Postives = 287/291 (98.63%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 100
           KHDERHTMITNSKEENSPPKL ASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC
Sbjct: 3   KHDERHTMITNSKEENSPPKLAASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 62

Query: 101 TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 160
           TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL
Sbjct: 63  TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 122

Query: 161 GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDD--EQKQHKSNSNPSSFSALLNNVSAPP 220
           GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDD  EQKQHKSNSNPSSFSALLNNVSAPP
Sbjct: 123 GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDDDEQKQHKSNSNPSSFSALLNNVSAPP 182

Query: 221 FGFHWDPSASSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 280
           FGFHWDPS SSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI
Sbjct: 183 FGFHWDPSLSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 242

Query: 281 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 243 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 293

[Close]

BLAST of Csor.00g123350 vs. ExPASy TrEMBL
Match: A0A6J1GWB2 (transcription factor TCP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 575 bits (1482), Expect = 2.26e-206
Identity = 291/295 (98.64%), Postives = 293/295 (99.32%), Query Frame = 0


Query: 37  MPAGKHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRH 96
           MPAGKHDERHTMITNSKEENSPPKLVASSSSSAA+ATPWLRLKDPRIVRVSRAFGGKDRH
Sbjct: 1   MPAGKHDERHTMITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRH 60

Query: 97  SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP 156
           SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP
Sbjct: 61  SKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIP 120

Query: 157 SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSA 216
           SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSA
Sbjct: 121 SASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSA 180

Query: 217 PPFGFHWDPSASSSSSSS--TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 276
           PPFGFHWDPS+SSSSSSS  TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ
Sbjct: 181 PPFGFHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 240

Query: 277 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 241 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 295

[Close]

BLAST of Csor.00g123350 vs. ExPASy TrEMBL
Match: A0A6J1GV58 (transcription factor TCP17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 566 bits (1460), Expect = 4.73e-203
Identity = 287/291 (98.63%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 100
           KHDERHTMITNSKEENSPPKLVASSSSSAA+ATPWLRLKDPRIVRVSRAFGGKDRHSKVC
Sbjct: 3   KHDERHTMITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVC 62

Query: 101 TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 160
           TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL
Sbjct: 63  TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 122

Query: 161 GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFG 220
           GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFG
Sbjct: 123 GLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFG 182

Query: 221 FHWDPSASSSSSSS--TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 280
           FHWDPS+SSSSSSS  TTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI
Sbjct: 183 FHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 242

Query: 281 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 243 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 293

[Close]

BLAST of Csor.00g123350 vs. ExPASy TrEMBL
Match: A0A6J1IZY4 (transcription factor TCP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479977 PE=4 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 1.76e-198
Identity = 284/295 (96.27%), Postives = 286/295 (96.95%), Query Frame = 0


Query: 37  MPAGKHDERHTMITNSKEENSPPKLVASSSSSAA--VATPWLRLKDPRIVRVSRAFGGKD 96
           MPAGKHDERHTMITNSKEENSPPKL ASSSSSAA  VATPWLRLKDPRIVRVSRAFGGKD
Sbjct: 1   MPAGKHDERHTMITNSKEENSPPKLAASSSSSAAAAVATPWLRLKDPRIVRVSRAFGGKD 60

Query: 97  RHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLP 156
           RHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLP
Sbjct: 61  RHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLP 120

Query: 157 IPSASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNV 216
           IPSASLGLHYQSMLPPH AHR EFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNV
Sbjct: 121 IPSASLGLHYQSMLPPHTAHRPEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNV 180

Query: 217 SAPPFGFHWDPSASSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 276
           SAPPFGFHWDPS  SSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ
Sbjct: 181 SAPPFGFHWDPS--SSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQ 240

Query: 277 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFV+Q KNNNGDPA+KED FGSDE
Sbjct: 241 NFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVSQDKNNNGDPAHKEDDFGSDE 293

[Close]

BLAST of Csor.00g123350 vs. ExPASy TrEMBL
Match: A0A6J1IX73 (transcription factor TCP17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479977 PE=4 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 3.69e-195
Identity = 280/291 (96.22%), Postives = 282/291 (96.91%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAA--VATPWLRLKDPRIVRVSRAFGGKDRHSK 100
           KHDERHTMITNSKEENSPPKL ASSSSSAA  VATPWLRLKDPRIVRVSRAFGGKDRHSK
Sbjct: 3   KHDERHTMITNSKEENSPPKLAASSSSSAAAAVATPWLRLKDPRIVRVSRAFGGKDRHSK 62

Query: 101 VCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSA 160
           VCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSA
Sbjct: 63  VCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSA 122

Query: 161 SLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPP 220
           SLGLHYQSMLPPH AHR EFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPP
Sbjct: 123 SLGLHYQSMLPPHTAHRPEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPP 182

Query: 221 FGFHWDPSASSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 280
           FGFHWDPS  SSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI
Sbjct: 183 FGFHWDPS--SSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFI 242

Query: 281 NNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 329
           NNSLNTPPPMHSITHPAVRPFHFSMATKFV+Q KNNNGDPA+KED FGSDE
Sbjct: 243 NNSLNTPPPMHSITHPAVRPFHFSMATKFVSQDKNNNGDPAHKEDDFGSDE 291

[Close]

BLAST of Csor.00g123350 vs. ExPASy TrEMBL
Match: A0A6J1GTT6 (transcription factor TCP17-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 520 bits (1340), Expect = 3.90e-185
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 0


Query: 64  SSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDL 123
           SSSSSAA+ATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDL
Sbjct: 3   SSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDL 62

Query: 124 QDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSG 183
           QDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSG
Sbjct: 63  QDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSG 122

Query: 184 IDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSS--TTNLPFF 243
           IDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPS+SSSSSSS  TTNLPFF
Sbjct: 123 IDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSSSSSSSSSSSTTNLPFF 182

Query: 244 TSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHF 303
           TSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHF
Sbjct: 183 TSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHF 242

Query: 304 SMATKFVAQHKNNNGDPANKEDGFGSDE 329
           SMATKFVAQHKNNNGDPANKEDGFGSDE
Sbjct: 243 SMATKFVAQHKNNNGDPANKEDGFGSDE 270

[Close]

BLAST of Csor.00g123350 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-38
Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 100
           K D+  T +  +  +    K   S SSS   ++ W++ KDPRIVRVSRAFGGKDRHSKVC
Sbjct: 26  KEDQEETEVRATSGKTVIKKQPTSISSS---SSSWMKSKDPRIVRVSRAFGGKDRHSKVC 85

Query: 101 TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 160
           T+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+ AK+EIDELPPLPI   + 
Sbjct: 86  TLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF 145

Query: 161 GL--HYQSML-----PPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSN 204
            +  H+QS L     P     +  FKIN  + K      +E  + K  ++
Sbjct: 146 SIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKSTTTSREENDREKGEND 192

[Close]

BLAST of Csor.00g123350 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 156.8 bits (395), Expect = 3.1e-38
Identity = 89/170 (52.35%), Postives = 112/170 (65.88%), Query Frame = 0


Query: 41  KHDERHTMITNSKEENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVC 100
           K D+  T +  +  +    K   S SSS   ++ W++ KDPRIVRVSRAFGGKDRHSKVC
Sbjct: 26  KEDQEETEVRATSGKTVIKKQPTSISSS---SSSWMKSKDPRIVRVSRAFGGKDRHSKVC 85

Query: 101 TIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASL 160
           T+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+ AK+EIDELPPLPI   + 
Sbjct: 86  TLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENF 145

Query: 161 GL--HYQSML-----PPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSN 204
            +  H+QS L     P     +  FKIN  + K      +E  + K  ++
Sbjct: 146 SIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKSTTTSREENDREKGEND 192

[Close]

BLAST of Csor.00g123350 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-33
Identity = 72/127 (56.69%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 37  MPAGKHDERHTMITNSKEENSPPK------LVASSSSSAAVATPWL-RLKDPRIVRVSRA 96
           M +G+ DE        +++N   +      L     SS + +  W    ++PRIVRVSR 
Sbjct: 1   MRSGECDEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRT 60

Query: 97  FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDE 156
           FGGKDRHSKVCT+RGLRDRR+RLSV TAIQLYDLQDRLGL+QPSKV+DWLL  AKD++D+
Sbjct: 61  FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDK 120

[Close]

BLAST of Csor.00g123350 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 128.6 bits (322), Expect = 9.0e-30
Identity = 94/214 (43.93%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 77  RLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVV 136
           R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ+RLGL+QPSKV+
Sbjct: 18  RWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVI 77

Query: 137 DWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSE-FKINSGIDKVEIDDDDEQ 196
           DWLL VAK+++D LPPL  P    G H    L P++    E F     + + + +  D +
Sbjct: 78  DWLLEVAKNDVDLLPPLQFPP---GFH---QLNPNLTGLGESFPGVFDLGRTQREALDLE 137

Query: 197 KQHKSNSNPSSFSALLNNVSAPPFGFHWDPSASSSSSSSTTNL--PFFTSQAEDLH-NFN 256
           K+   N         L++V       H D     S+S  +  L  P  TS +   H N  
Sbjct: 138 KRKWVN---------LDHVFD-----HIDHHNHFSNSIQSNKLYFPTITSSSSSYHYNLG 197

Query: 257 HVTPLSL-STGSQFLEFNNHLHQNFFINNSLNTP 286
           H+    L  +G+  + F+N+     + NN+LN P
Sbjct: 198 HLQQSLLDQSGNVTVAFSNN-----YNNNNLNPP 206

[Close]

BLAST of Csor.00g123350 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 109.4 bits (272), Expect = 5.6e-24
Identity = 98/291 (33.68%), Postives = 135/291 (46.39%), Query Frame = 0


Query: 54  EENSPPKLVASSSSSAAVATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLS 113
           +E    KL   S  +  +   W      RI+RVSRA GGKDRHSKV T +GLRDRR+RLS
Sbjct: 13  QEQQSRKLQRFSEDNTGLMRNW-NNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLS 72

Query: 114 VSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIA 173
           V+TAIQ YDLQDRLG +QPSK V+WL+N A D I +LP L      L  +         +
Sbjct: 73  VATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTNFDHLDQNQNQTKSACSS 132

Query: 174 HRSEFKINSGIDKVEIDDDDEQKQHKSNSNP---------SSFSALL-NNVSAPPFGFHW 233
             SE  + S + + EI     ++  +  +           SSF+ LL       P   +W
Sbjct: 133 GTSESSLLS-LSRTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPSNRNW 192

Query: 234 DPSAS----------SSSSSSTTNLPFF--------TSQAEDLHNFNHVTPLSLSTGSQ- 293
              +           +SSS    N PF          S +    N  + +  +L + SQ 
Sbjct: 193 TGGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQS 252

Query: 294 -FLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNN 315
            FL  NN++ Q   I++S ++  PM S      +   F MAT     H N+
Sbjct: 253 LFLNNNNNITQRSSISSSSSSSSPMDS------QSISFFMATPPPLDHHNH 295

The following BLAST results are available for this feature:

BLAST of Csor.00g123350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7W5	4.3e-37	52.35	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9FME3	4.2e-32	56.69	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9LEZ9	1.3e-28	43.93	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9C758	7.9e-23	33.68	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
Q93V43	1.0e-22	73.61	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of Csor.00g123350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581736.1	5.44e-236	100.00	Transcription factor TCP13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022955449.1	4.67e-206	98.64	transcription factor TCP17-like isoform X1 [Cucurbita moschata] >KAG7011073.1 Tr...	[more]
XP_023527017.1	1.34e-205	98.64	transcription factor TCP17-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022955450.1	9.78e-203	98.63	transcription factor TCP17-like isoform X2 [Cucurbita moschata]	[more]
XP_023527016.1	2.80e-202	98.63	transcription factor TCP17-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g123350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWB2	2.26e-206	98.64	transcription factor TCP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GV58	4.73e-203	98.63	transcription factor TCP17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1IZY4	1.76e-198	96.27	transcription factor TCP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1IX73	3.69e-195	96.22	transcription factor TCP17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GTT6	3.90e-185	98.51	transcription factor TCP17-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Csor.00g123350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02150.1	3.1e-38	52.35	plastid transcription factor 1	[more]
AT3G02150.2	3.1e-38	52.35	plastid transcription factor 1	[more]
AT5G60970.1	3.0e-33	56.69	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	9.0e-30	43.93	TCP domain protein 17	[more]
AT1G30210.1	5.6e-24	33.68	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 92..191 e-value: 2.7E-27 score: 96.2
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 92..150 score: 30.199102
None	No IPR available	PANTHER	PTHR31072:SF147	TRANSCRIPTION FACTOR TCP2-LIKE	coord: 49..198
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 49..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g123350.m01	Csor.00g123350.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding