Csor.00g123320 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g123320
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein COBRA-like
Location	Csor_Chr14: 11135844 .. 11137207 (-)
RNA-Seq Expression	Csor.00g123320
Synteny	Csor.00g123320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTACCCATTTACAGATTACCCTCTCTCTTTGCCCTTCTCGCCATATTTGTTGCCTTCTCCACCTTTCTTGCTTCCACAGGTTCGTTTCTTCTTCTTATTTTTCTGGGGTTTTTTCCCCTTTGTTCTAACTCTCTTTTTGTTTCAATGGGGTATCAGTTTGTTTGTTTGTTTGTTTTCATAATCGTCTCTGTTTATAAGAATCTGTCTCCCTTTTGCTTGTGATTTTGACTGATCGGTTCTAGAATCTGCTCCTCCTTCGTTGAATTTGATGAATGATGAAATGATAGCTTTGATCTTCCATTACTTTGTGTTCCATTTCTCTCATTTTCTTGAATTTTATTTTATTCTTGGATCTTGGTCAAACGGGTGGACTACTTGGACTTCAGTTTTGGGTTTCGTTCTTGAACATTCAAATGAGTTTTTTTAACAGTTTTTGGGTTTAATGCATTATACTCTCTCTGCATGCACCGGAATCTCAACAAATAATTCCGTTTGTGAGAAATTTTCATCTGTTATGTTGGTTTAATTTCCTAGGTTATTTTCTTGAGGCTACTAATTCTGTTCATGGACCATATGTTGTTTTTTTCTTGCTGGCTTCTTCGTTTAATCATTATTATTTGAGTAATAACTTTACTGATTTATACTTTGGTTTTTTCCCTTTCTTATTTGATTTTCAGAAGCGTATGACCCACTTGATCCAAATGGAAACATTACTGTCAAATGGGATGTTATAAACTGGACTCCTGATGGCTATGTTGTAAGTATTATGGCATCCAAGCGCCCATATTTTGAAATATAACTGTGAGGCACTAATGGGGGGATGATAATAATAGGAAATTTAGTGTCCTTTTTCGTTTTGTGCTTGTTTTTACATATTGAACTATAGTTATACGTGTATAGGCTGTGGTTACTCTGTACAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAGCATGTTGGGGGGGGCCAAACAACAGAGCAAGGTGATTGTTCTAGATATAAAGGCAACATCCCTCATTGCTGCAAGAGGGATCCGACCGTTGTCGATTTACTGCCCGGAACTCCTTATAACCAGCAGATTGCTAATTGCTGCAAAGGTGGAGTTATCAACTCCTGGGTACAAGATCCTGTTACTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCTGCTGGAACCTCGAATAAAACTGTTCGTCTGCCGAAGAACTTCACCCTAAAAGCACCCGGGCCTGGTTATACTTGTGGACCGGCAAAAATTGTTAAACCGAGCAAATTCATTTCAGCTGACAACGGAGAGTTACACAGGCCTTGA

mRNA sequence

ATGGCTGTACCCATTTACAGATTACCCTCTCTCTTTGCCCTTCTCGCCATATTTGTTGCCTTCTCCACCTTTCTTGCTTCCACAGAAGCGTATGACCCACTTGATCCAAATGGAAACATTACTGTCAAATGGGATGTTATAAACTGGACTCCTGATGGCTATGTTGTAAGCTGTGGTTACTCTGTACAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAGCATGTTGGGGGGGGCCAAACAACAGAGCAAGGTGATTGTTCTAGATATAAAGGCAACATCCCTCATTGCTGCAAGAGGGATCCGACCGTTGTCGATTTACTGCCCGGAACTCCTTATAACCAGCAGATTGCTAATTGCTGCAAAGGTGGAGTTATCAACTCCTGGGTACAAGATCCTGTTACTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCTGCTGGAACCTCGAATAAAACTGTTCGTCTGCCGAAGAACTTCACCCTAAAAGCACCCGGGCCTGGTTATACTTGTGGACCGGCAAAAATTGTTAAACCGAGCAAATTCATTTCAGCTGACAACGGAGAGTTACACAGGCCTTGA

Coding sequence (CDS)

ATGGCTGTACCCATTTACAGATTACCCTCTCTCTTTGCCCTTCTCGCCATATTTGTTGCCTTCTCCACCTTTCTTGCTTCCACAGAAGCGTATGACCCACTTGATCCAAATGGAAACATTACTGTCAAATGGGATGTTATAAACTGGACTCCTGATGGCTATGTTGTAAGCTGTGGTTACTCTGTACAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAGCATGTTGGGGGGGGCCAAACAACAGAGCAAGGTGATTGTTCTAGATATAAAGGCAACATCCCTCATTGCTGCAAGAGGGATCCGACCGTTGTCGATTTACTGCCCGGAACTCCTTATAACCAGCAGATTGCTAATTGCTGCAAAGGTGGAGTTATCAACTCCTGGGTACAAGATCCTGTTACTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCTGCTGGAACCTCGAATAAAACTGTTCGTCTGCCGAAGAACTTCACCCTAAAAGCACCCGGGCCTGGTTATACTTGTGGACCGGCAAAAATTGTTAAACCGAGCAAATTCATTTCAGCTGACAACGGAGAGTTACACAGGCCTTGA

Protein sequence

MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFISADNGELHRP

Homology

[Close]

BLAST of Csor.00g123320 vs. ExPASy Swiss-Prot
Match: Q94KT8 (Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 9.3e-70
Identity = 126/192 (65.62%), Postives = 146/192 (76.04%), Query Frame = 0


Query: 10  SLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISS 69
           S  AL  +F+  S+   STEAYD LDP GNIT+KWDV++WTPDGY V+      F     
Sbjct: 16  SFLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGY-VAVVTMFNFQKYRH 75

Query: 70  YSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYN 129
             S G     +  K+      V G QTTEQGDCS+YKGNIPHCCK+DPTVVDLLPGTPYN
Sbjct: 76  IQSPGWTLGWKWAKKEVIWSMV-GAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYN 135

Query: 130 QQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPA 189
           QQIANCCKGGV+NSWVQDP TA SSFQ+SVGAAGT+NKTVR+P+NFTL  PGPGYTCGPA
Sbjct: 136 QQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPA 195

Query: 190 KIVKPSKFISAD 202
           KIV+P+KF++ D
Sbjct: 196 KIVRPTKFVTTD 205

[Close]

BLAST of Csor.00g123320 vs. ExPASy Swiss-Prot
Match: Q6Z4G8 (COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-66
Identity = 125/204 (61.27%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGY--VVSC 60
           MA+ + R+    ALL  F  FS+ + S+EAYDPLDPNGNIT+KWDV+ WTPDGY  VVS 
Sbjct: 1   MALLLLRMGVSVALLVAF--FSSLIPSSEAYDPLDPNGNITIKWDVLQWTPDGYVAVVSL 60

Query: 61  GYSVQFPTISSYS-STGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDP 120
               Q+  I S     G V A     ++  +  + GGQ TEQGDCS++K NIPHCCK+DP
Sbjct: 61  YNYQQYRHIQSPGWKLGWVWA-----KKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDP 120

Query: 121 TVVDLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTL 180
            +VDLLPGTPYN QIANCCKGGV+NSW QDP  A++SFQ+SVG AGT+NKTVR+P+NFTL
Sbjct: 121 EIVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTL 180

Query: 181 KAPGPGYTCGPAKIVKPSKFISAD 202
           K+PGPGYTCG AK+V+P+KF S D
Sbjct: 181 KSPGPGYTCGSAKVVRPTKFFSQD 197

[Close]

BLAST of Csor.00g123320 vs. ExPASy Swiss-Prot
Match: Q9SRT7 (COBRA-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=COBL1 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.3e-66
Identity = 119/190 (62.63%), Postives = 142/190 (74.74%), Query Frame = 0


Query: 12  FALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISSYS 71
           F +  IF+   + L  +EAYDPLDP+GNITVKWD+I WT DGYV +      F       
Sbjct: 15  FGISIIFLVSFSGLTPSEAYDPLDPSGNITVKWDIITWTGDGYVATVTV-YNFQQYRHIQ 74

Query: 72  STGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYNQQ 131
           + G        K R  +  + GGQTTEQGDCS++KG IPHCCK+ P+VVDLLPG+PYNQQ
Sbjct: 75  APGWTLGWSWAK-REVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQ 134

Query: 132 IANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKI 191
           IANCC+GGV+NSW QDP TAVS+FQL+VG AGT+NKTVR+PKNFTLKAPGPGYTC PAKI
Sbjct: 135 IANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKI 194

Query: 192 VKPSKFISAD 202
           VKP++FI  D
Sbjct: 195 VKPTRFIGTD 202

[Close]

BLAST of Csor.00g123320 vs. ExPASy Swiss-Prot
Match: Q8L8Q7 (COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-62
Identity = 115/194 (59.28%), Postives = 144/194 (74.23%), Query Frame = 0


Query: 10  SLFALLAIFV-AFSTF-LASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTI 69
           S F+ L +F+ ++++F   +TEAYD LDP GNIT+KWD+++WT DGYV        F   
Sbjct: 6   SRFSFLLLFLCSWTSFTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTI-FNFQQY 65

Query: 70  SSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTP 129
               + G        K+      V GGQ TEQGDCS++KGNIPHCCK+ P +VDLLPGTP
Sbjct: 66  RHIEAPGWQLGWSWMKKEVIWSMV-GGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTP 125

Query: 130 YNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCG 189
           YNQQI+NCC+GGVI++W QDP TA+SSFQ+SVG +GT+N TVR P+N TLKAPGPGYTCG
Sbjct: 126 YNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCG 185

Query: 190 PAKIVKPSKFISAD 202
           PAK+VKPS+FISAD
Sbjct: 186 PAKLVKPSRFISAD 197

[Close]

BLAST of Csor.00g123320 vs. ExPASy Swiss-Prot
Match: Q60E70 (COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-61
Identity = 119/193 (61.66%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 14  LLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISSYSST 73
           LLA  + FS   A+TEAYD LDPNGNIT+KWDV++WTPDGYV          T+ +Y   
Sbjct: 21  LLAAALLFSA-PATTEAYDALDPNGNITIKWDVMSWTPDGYVA-------VVTMFNYQQF 80

Query: 74  GMVSA--MEMGKERGHMEHVG---GGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPY 133
             + A   ++G      E +    G QTTEQGDCS++KG  PHCCK+DPTVVDLLPGTPY
Sbjct: 81  RHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGTPHCCKKDPTVVDLLPGTPY 140

Query: 134 NQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGP 193
           N QIANCCK GVIN++ QDP  A SSFQ+SVG AGT+NKTV+LPKNFTLKAPGPGYTCG 
Sbjct: 141 NMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGR 200

Query: 194 AKIVKPSKFISAD 202
           A IV+P+KF + D
Sbjct: 201 AMIVRPTKFFTGD 205

[Close]

BLAST of Csor.00g123320 vs. NCBI nr
Match: KAG6581733.1 (Protein COBRA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434 bits (1116), Expect = 9.09e-154
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY
Sbjct: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
           SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV
Sbjct: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180

Query: 181 GPGYTCGPAKIVKPSKFISADNGELHRP 208
           GPGYTCGPAKIVKPSKFISADNGELHRP
Sbjct: 181 GPGYTCGPAKIVKPSKFISADNGELHRP 208

[Close]

BLAST of Csor.00g123320 vs. NCBI nr
Match: KAG6581729.1 (Protein COBRA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331 bits (848), Expect = 5.67e-109
Identity = 167/201 (83.08%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYV     
Sbjct: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVAVVTL 60

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG QTTEQGDCSRYKGNIPHCCKRDPTVV
Sbjct: 61  -YNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGG-QTTEQGDCSRYKGNIPHCCKRDPTVV 120

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKFISAD
Sbjct: 181 GPGYTCGPAKIVKPSKFISAD 199

[Close]

BLAST of Csor.00g123320 vs. NCBI nr
Match: XP_023526993.1 (protein COBRA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330 bits (845), Expect = 6.67e-109
Identity = 165/201 (82.09%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGN+TVKWDVINWTPDGYV     
Sbjct: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNVTVKWDVINWTPDGYVAVVTL 60

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG QTTEQGDCSRYKGNIPHCCKRDPTVV
Sbjct: 61  -YNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGG-QTTEQGDCSRYKGNIPHCCKRDPTVV 120

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 121 DLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKFISAD
Sbjct: 181 GPGYTCGPAKIVKPSKFISAD 199

[Close]

BLAST of Csor.00g123320 vs. NCBI nr
Match: XP_022955698.1 (protein COBRA-like [Cucurbita moschata])

HSP 1 Score: 330 bits (846), Expect = 4.95e-108
Identity = 166/201 (82.59%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYV     
Sbjct: 80  MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVAVVTL 139

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG QTTEQGDCSRYKGNIPHCCKRDPTVV
Sbjct: 140 -YNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGG-QTTEQGDCSRYKGNIPHCCKRDPTVV 199

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 200 DLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 259

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKFISAD
Sbjct: 260 GPGYTCGPAKIVKPSKFISAD 278

[Close]

BLAST of Csor.00g123320 vs. NCBI nr
Match: KAG7018201.1 (Protein COBRA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327 bits (839), Expect = 5.39e-108
Identity = 165/201 (82.09%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDV NWTPDGYV     
Sbjct: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVRNWTPDGYVAVVTL 60

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG QTTEQGDCSRYKGNIPHCCKRDPTVV
Sbjct: 61  -YNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGG-QTTEQGDCSRYKGNIPHCCKRDPTVV 120

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 121 DLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKFISAD
Sbjct: 181 GPGYTCGPAKIVKPSKFISAD 199

[Close]

BLAST of Csor.00g123320 vs. ExPASy TrEMBL
Match: A0A6J1GUP9 (protein COBRA-like OS=Cucurbita moschata OX=3662 GN=LOC111457618 PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 2.40e-108
Identity = 166/201 (82.59%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYV     
Sbjct: 80  MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVAVVTL 139

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG QTTEQGDCSRYKGNIPHCCKRDPTVV
Sbjct: 140 -YNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGG-QTTEQGDCSRYKGNIPHCCKRDPTVV 199

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 200 DLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 259

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKFISAD
Sbjct: 260 GPGYTCGPAKIVKPSKFISAD 278

[Close]

BLAST of Csor.00g123320 vs. ExPASy TrEMBL
Match: A0A6J1IWY0 (COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479933 PE=3 SV=1)

HSP 1 Score: 324 bits (831), Expect = 4.23e-107
Identity = 162/201 (80.60%), Postives = 168/201 (83.58%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPIYRLPS F LLAIF AFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYV     
Sbjct: 1   MAVPIYRLPSFFPLLAIFFAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVAVVTL 60

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG QTTEQGDCSRYKGNIPHCCKRDPT+V
Sbjct: 61  -YNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGG-QTTEQGDCSRYKGNIPHCCKRDPTIV 120

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 121 DLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKFISAD
Sbjct: 181 GPGYTCGPAKIVKPSKFISAD 199

[Close]

BLAST of Csor.00g123320 vs. ExPASy TrEMBL
Match: A0A1S3CMB3 (COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103502425 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 2.80e-97
Identity = 148/201 (73.63%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MA+PI RL SLF LLA+F+AFSTFLASTEAYDPLDPNGNIT+KWDV++WT DGYV     
Sbjct: 3   MALPISRLHSLFPLLALFLAFSTFLASTEAYDPLDPNGNITIKWDVMSWTADGYVAVVTL 62

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+   + ++ GGQ TEQGDCSR+KGNIPHCCK+DPTVV
Sbjct: 63  -YNFQQYRHIQTPGWSLQWKWAKKE-VIWNMMGGQATEQGDCSRFKGNIPHCCKKDPTVV 122

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDP TAVSSFQL+VG+AGTSNKTVRLPKNFTLKAP
Sbjct: 123 DLLPGTPYNQQIANCCKGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAP 182

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKF S D
Sbjct: 183 GPGYTCGPAKIVKPSKFKSPD 201

[Close]

BLAST of Csor.00g123320 vs. ExPASy TrEMBL
Match: A0A0A0KW50 (COBRA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G129050 PE=3 SV=1)

HSP 1 Score: 298 bits (764), Expect = 5.62e-97
Identity = 147/201 (73.13%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MA+PI RL SLF LLA+F+AFSTFLASTEAYDPLDPNGNIT+KWD+++WT DGYV     
Sbjct: 3   MALPISRLHSLFPLLALFLAFSTFLASTEAYDPLDPNGNITIKWDIMSWTADGYVAVVTL 62

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+   + ++ GGQ TEQGDCSR+KGNIPHCCK+DPTVV
Sbjct: 63  -YNFQQYRHIQTPGWSLQWKWAKKE-VIWNMLGGQATEQGDCSRFKGNIPHCCKKDPTVV 122

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDP TAVSSFQL+VG+AGTSNKTVRLPKNFTLKAP
Sbjct: 123 DLLPGTPYNQQIANCCKGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAP 182

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKPSKF S D
Sbjct: 183 GPGYTCGPAKIVKPSKFKSPD 201

[Close]

BLAST of Csor.00g123320 vs. ExPASy TrEMBL
Match: A0A6J1DLW8 (COBRA-like protein OS=Momordica charantia OX=3673 GN=LOC111022184 PE=3 SV=1)

HSP 1 Score: 297 bits (760), Expect = 2.13e-96
Identity = 147/201 (73.13%), Postives = 160/201 (79.60%), Query Frame = 0


Query: 1   MAVPIYRLPSLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGY 60
           MAVPI+RLPS   LLAIF+AFS+   ST AYDPLDPNGNITVKWDVI+WT DGY+     
Sbjct: 1   MAVPIFRLPSNLPLLAIFLAFSSLFTSTVAYDPLDPNGNITVKWDVISWTADGYIAVVTL 60

Query: 61  SVQFPTISSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVV 120
              F       + G     +  K+      +GG Q TEQGDCSRYKGNIPHCCKRDPT+V
Sbjct: 61  -YNFQQYRHIQAPGWSLQWKWAKKEVIWSAMGG-QATEQGDCSRYKGNIPHCCKRDPTIV 120

Query: 121 DLLPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180
           DLLPGTPYNQQIANCCKGGV+NSWVQDP +AVSSFQLSVGAAGTSNKTVRLPKNFTLKAP
Sbjct: 121 DLLPGTPYNQQIANCCKGGVLNSWVQDPASAVSSFQLSVGAAGTSNKTVRLPKNFTLKAP 180

Query: 181 GPGYTCGPAKIVKPSKFISAD 201
           GPGYTCGPAKIVKP+KFIS D
Sbjct: 181 GPGYTCGPAKIVKPTKFISPD 199

[Close]

BLAST of Csor.00g123320 vs. TAIR 10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 264.6 bits (675), Expect = 6.6e-71
Identity = 126/192 (65.62%), Postives = 146/192 (76.04%), Query Frame = 0


Query: 10  SLFALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISS 69
           S  AL  +F+  S+   STEAYD LDP GNIT+KWDV++WTPDGY V+      F     
Sbjct: 16  SFLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGY-VAVVTMFNFQKYRH 75

Query: 70  YSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYN 129
             S G     +  K+      V G QTTEQGDCS+YKGNIPHCCK+DPTVVDLLPGTPYN
Sbjct: 76  IQSPGWTLGWKWAKKEVIWSMV-GAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYN 135

Query: 130 QQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPA 189
           QQIANCCKGGV+NSWVQDP TA SSFQ+SVGAAGT+NKTVR+P+NFTL  PGPGYTCGPA
Sbjct: 136 QQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPA 195

Query: 190 KIVKPSKFISAD 202
           KIV+P+KF++ D
Sbjct: 196 KIVRPTKFVTTD 205

[Close]

BLAST of Csor.00g123320 vs. TAIR 10
Match: AT3G02210.1 (COBRA-like protein 1 precursor )

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-67
Identity = 119/190 (62.63%), Postives = 142/190 (74.74%), Query Frame = 0


Query: 12  FALLAIFVAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISSYS 71
           F +  IF+   + L  +EAYDPLDP+GNITVKWD+I WT DGYV +      F       
Sbjct: 15  FGISIIFLVSFSGLTPSEAYDPLDPSGNITVKWDIITWTGDGYVATVTV-YNFQQYRHIQ 74

Query: 72  STGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYNQQ 131
           + G        K R  +  + GGQTTEQGDCS++KG IPHCCK+ P+VVDLLPG+PYNQQ
Sbjct: 75  APGWTLGWSWAK-REVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQ 134

Query: 132 IANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKI 191
           IANCC+GGV+NSW QDP TAVS+FQL+VG AGT+NKTVR+PKNFTLKAPGPGYTC PAKI
Sbjct: 135 IANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKI 194

Query: 192 VKPSKFISAD 202
           VKP++FI  D
Sbjct: 195 VKPTRFIGTD 202

[Close]

BLAST of Csor.00g123320 vs. TAIR 10
Match: AT3G29810.1 (COBRA-like protein 2 precursor )

HSP 1 Score: 239.6 bits (610), Expect = 2.3e-63
Identity = 115/194 (59.28%), Postives = 144/194 (74.23%), Query Frame = 0


Query: 10  SLFALLAIFV-AFSTF-LASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTI 69
           S F+ L +F+ ++++F   +TEAYD LDP GNIT+KWD+++WT DGYV        F   
Sbjct: 6   SRFSFLLLFLCSWTSFTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTI-FNFQQY 65

Query: 70  SSYSSTGMVSAMEMGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTP 129
               + G        K+      V GGQ TEQGDCS++KGNIPHCCK+ P +VDLLPGTP
Sbjct: 66  RHIEAPGWQLGWSWMKKEVIWSMV-GGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTP 125

Query: 130 YNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCG 189
           YNQQI+NCC+GGVI++W QDP TA+SSFQ+SVG +GT+N TVR P+N TLKAPGPGYTCG
Sbjct: 126 YNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCG 185

Query: 190 PAKIVKPSKFISAD 202
           PAK+VKPS+FISAD
Sbjct: 186 PAKLVKPSRFISAD 197

[Close]

BLAST of Csor.00g123320 vs. TAIR 10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 228.4 bits (581), Expect = 5.3e-60
Identity = 105/181 (58.01%), Postives = 128/181 (70.72%), Query Frame = 0


Query: 21  FSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVVSCGYSVQFPTISSYSSTGMVSAME 80
           F   + +  AYDPLDP+GNIT+KWD+++WT DGYV +   +  F       + G      
Sbjct: 11  FFMIIFTATAYDPLDPSGNITIKWDIMSWTADGYVATVTMN-NFQIYRHIQNPGWTLGWT 70

Query: 81  MGKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGV 140
             K+      V G QTTEQGDCS++KGN+PHCCK+ PTVVDLLPG PYNQQ +NCCKGGV
Sbjct: 71  WAKKEVIWSMV-GAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGV 130

Query: 141 INSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFISA 200
           I +W QDP  AVS FQ+S G AGT+NKTV+LPKNFTL  PGPGYTCGPAKIV  + F++ 
Sbjct: 131 IGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTT 189

Query: 201 D 202
           D
Sbjct: 191 D 189

[Close]

BLAST of Csor.00g123320 vs. TAIR 10
Match: AT5G60950.1 (COBRA-like protein 5 precursor )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 95/199 (47.74%), Postives = 124/199 (62.31%), Query Frame = 0


Query: 8   LPSLFALLAIFVAFS-TFLASTEAYDPLDPN-GNITVKWDVINWTPDGYVVSCGYSVQFP 67
           + SLF+ + + +  S + L STEA   L  N GNITVKWD++NWTPDGYV          
Sbjct: 1   MESLFSTMIVLLLVSFSCLISTEA---LTSNYGNITVKWDLLNWTPDGYVA-------VV 60

Query: 68  TISSYSSTGMVSAMEM---GKERGHMEHVGGGQTTEQGDCSRYKGNIPHCCKRDPTVVDL 127
           T  +Y     +   +M   G ++  + ++ G +TT QG CS +KGNIP  C R PTVVDL
Sbjct: 61  TAYNYQKQRSIPGWKMSWRGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDL 120

Query: 128 LPGTPYNQQIANCCKGGVINSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGP 187
           LPGTP+NQQIANCCK GV+    +      S+FQLSVG+AG S KT R+P NF   AP  
Sbjct: 121 LPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMPANFMFTAPKQ 180

Query: 188 GYTCGPAKIVKPSKFISAD 202
            Y CGP+K V+P++F +AD
Sbjct: 181 QYICGPSKNVRPTRFTTAD 183

The following BLAST results are available for this feature:

BLAST of Csor.00g123320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KT8	9.3e-70	65.63	Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1	[more]
Q6Z4G8	2.1e-66	61.27	COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1	[more]
Q9SRT7	6.3e-66	62.63	COBRA-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=COBL1 PE=2 SV=1	[more]
Q8L8Q7	3.2e-62	59.28	COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2	[more]
Q60E70	2.1e-61	61.66	COBRA-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L4 PE=2 SV=1	[more]

BLAST of Csor.00g123320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581733.1	9.09e-154	100.00	Protein COBRA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6581729.1	5.67e-109	83.08	Protein COBRA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023526993.1	6.67e-109	82.09	protein COBRA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955698.1	4.95e-108	82.59	protein COBRA-like [Cucurbita moschata]	[more]
KAG7018201.1	5.39e-108	82.09	Protein COBRA [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g123320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUP9	2.40e-108	82.59	protein COBRA-like OS=Cucurbita moschata OX=3662 GN=LOC111457618 PE=3 SV=1	[more]
A0A6J1IWY0	4.23e-107	80.60	COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479933 PE=3 SV=1	[more]
A0A1S3CMB3	2.80e-97	73.63	COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103502425 PE=3 SV=1	[more]
A0A0A0KW50	5.62e-97	73.13	COBRA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G129050 PE=3 SV=1	[more]
A0A6J1DLW8	2.13e-96	73.13	COBRA-like protein OS=Momordica charantia OX=3673 GN=LOC111022184 PE=3 SV=1	[more]

BLAST of Csor.00g123320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60920.1	6.6e-71	65.63	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G02210.1	4.4e-67	62.63	COBRA-like protein 1 precursor	[more]
AT3G29810.1	2.3e-63	59.28	COBRA-like protein 2 precursor	[more]
AT5G15630.1	5.3e-60	58.01	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT5G60950.1	1.1e-41	47.74	COBRA-like protein 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 89..202 e-value: 5.8E-44 score: 149.9
IPR006918	COBRA, plant	PANTHER	PTHR31673	PROTEIN COBRA	coord: 10..202
None	No IPR available	PANTHER	PTHR31673:SF36	COBRA-LIKE PROTEIN	coord: 10..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g123320.m01	Csor.00g123320.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010215	cellulose microfibril organization
biological_process	GO:0052324	plant-type cell wall cellulose biosynthetic process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031225	anchored component of membrane