Csor.00g123150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g123150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	aspartic proteinase PCS1-like
Location	Csor_Chr01: 6053224 .. 6053627 (-)
RNA-Seq Expression	Csor.00g123150
Synteny	Csor.00g123150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTCTCTCTCCTATTTCTCTCCCTATTCTGTCTCTTATTCTCCCCATCAAACTCCCTCTCCCTCTCCCTCCCTCTGACCTACCATTCTGTCTCCTCCCAAGAAGCCTCCCTTTCCCTCTCCTCCAAAACCAAATCCCATGGGAAGTTCCCCTTCCAGTACTCCAACGCCCTTGTGGTGTCTGTTCCCATTGGATCGCCGCCGCAGCAGATGGACATGGTCGTAGACACTGGCAGCCAACTGTCCTGGATTCAATGCCACGGCAAAGTAAGGAGAAAATCAGTGAAGCCCATGATTAATTGGTTTGACCCTTATCTCTCCTCCTCTTTCTCTTTCCTTCCCTGTAACACCACTCTGTGCAGACCCCGAATTCCCGATTTTACCCTTCCTACTTCTTGTGA

mRNA sequence

ATGCCTCTCTCTCTCCTATTTCTCTCCCTATTCTGTCTCTTATTCTCCCCATCAAACTCCCTCTCCCTCTCCCTCCCTCTGACCTACCATTCTGTCTCCTCCCAAGAAGCCTCCCTTTCCCTCTCCTCCAAAACCAAATCCCATGGGAAGTTCCCCTTCCAGTACTCCAACGCCCTTGTGGTGTCTGTTCCCATTGGATCGCCGCCGCAGCAGATGGACATGGTCGTAGACACTGGCAGCCAACTGTCCTGGATTCAATGCCACGGCAAAACCCCGAATTCCCGATTTTACCCTTCCTACTTCTTGTGA

Coding sequence (CDS)

ATGCCTCTCTCTCTCCTATTTCTCTCCCTATTCTGTCTCTTATTCTCCCCATCAAACTCCCTCTCCCTCTCCCTCCCTCTGACCTACCATTCTGTCTCCTCCCAAGAAGCCTCCCTTTCCCTCTCCTCCAAAACCAAATCCCATGGGAAGTTCCCCTTCCAGTACTCCAACGCCCTTGTGGTGTCTGTTCCCATTGGATCGCCGCCGCAGCAGATGGACATGGTCGTAGACACTGGCAGCCAACTGTCCTGGATTCAATGCCACGGCAAAACCCCGAATTCCCGATTTTACCCTTCCTACTTCTTGTGA

Protein sequence

MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALVVSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYPSYFL

Homology

[Close]

BLAST of Csor.00g123150 vs. ExPASy Swiss-Prot
Match: Q9LZL3 (Aspartic proteinase PCS1 OS=Arabidopsis thaliana OX=3702 GN=PCS1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.1e-06
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 12  CLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKT-----KSHGKFPFQYSNALVVSVPIG 71
           C+  S S+S S S      S SSQ   L L ++      +   K  F ++  L V++ +G
Sbjct: 21  CVSSSSSSSSSFSFSSFSSSSSSQTLVLPLKTRITPTDHRPTDKLHFHHNVTLTVTLTVG 80

Query: 72  SPPQQMDMVVDTGSQLSWIQCH-GKTPN 94
           +PPQ + MV+DTGS+LSW++C+    PN
Sbjct: 81  TPPQNISMVIDTGSELSWLRCNRSSNPN 108

[Close]

BLAST of Csor.00g123150 vs. NCBI nr
Match: KAG6607568.1 (hypothetical protein SDJN03_00910, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (500), Expect = 2.76e-63
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
           MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1   MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61  VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYPSYFL 102
           VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYPSYFL
Sbjct: 61  VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYPSYFL 102

[Close]

BLAST of Csor.00g123150 vs. NCBI nr
Match: KAG6607570.1 (Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171 bits (434), Expect = 9.31e-50
Identity = 91/98 (92.86%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. NCBI nr
Match: KAG6607571.1 (Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171 bits (434), Expect = 2.28e-49
Identity = 91/98 (92.86%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. NCBI nr
Match: KAG6607573.1 (Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (406), Expect = 3.25e-45
Identity = 87/98 (88.78%), Postives = 87/98 (88.78%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSL  LLFSPSNSLSLS PLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1  MPLSLLLLSLLGLLFSPSNSLSLSFPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. NCBI nr
Match: XP_023523298.1 (aspartic proteinase PCS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159 bits (401), Expect = 1.78e-44
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSLF LLFSPSNSLSLS PLT HSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1  MPLSLLLLSLFGLLFSPSNSLSLSFPLTSHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK 90
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK 90

[Close]

BLAST of Csor.00g123150 vs. ExPASy TrEMBL
Match: A0A6J1EWZ6 (aspartic proteinase PCS1-like OS=Cucurbita moschata OX=3662 GN=LOC111438863 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 3.37e-44
Identity = 86/98 (87.76%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSL  LLFSPSNSLSLS PLT HSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1  MPLSLLLLSLLGLLFSPSNSLSLSFPLTSHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. ExPASy TrEMBL
Match: A0A6J1F0M7 (aspartic proteinase PCS1-like OS=Cucurbita moschata OX=3662 GN=LOC111438404 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 3.37e-44
Identity = 86/98 (87.76%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSL  LLFSPSNSLSLS PLT HSVSSQEASLSLSSKTKSHGKFPFQYSNALV
Sbjct: 1  MPLSLLLLSLLGLLFSPSNSLSLSFPLTSHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. ExPASy TrEMBL
Match: A0A6J1ICW1 (aspartic proteinase PCS1-like OS=Cucurbita maxima OX=3661 GN=LOC111471394 PE=3 SV=1)

HSP 1 Score: 156 bits (394), Expect = 9.36e-44
Identity = 85/98 (86.73%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSLF +LFSPSNSLSLS PLT HSVSSQEASLSLSSKTKSHGK PFQYSNALV
Sbjct: 1  MPLSLLLLSLFGVLFSPSNSLSLSFPLTSHSVSSQEASLSLSSKTKSHGKLPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. ExPASy TrEMBL
Match: A0A6J1I612 (aspartic proteinase PCS1-like OS=Cucurbita maxima OX=3661 GN=LOC111471392 PE=3 SV=1)

HSP 1 Score: 156 bits (394), Expect = 9.36e-44
Identity = 85/98 (86.73%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSLF +LFSPSNSLSLS PLT HSVSSQEASLSLSSKTKSHGK PFQYSNALV
Sbjct: 1  MPLSLLLLSLFGVLFSPSNSLSLSFPLTSHSVSSQEASLSLSSKTKSHGKLPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. ExPASy TrEMBL
Match: A0A6J1IBE7 (aspartic proteinase PCS1-like OS=Cucurbita maxima OX=3661 GN=LOC111471393 PE=3 SV=1)

HSP 1 Score: 156 bits (394), Expect = 9.36e-44
Identity = 85/98 (86.73%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MPLSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKTKSHGKFPFQYSNALV 60
          MPLSLL LSLF +LFSPSNSLSLS PLT HSVSSQEASLSLSSKTKSHGK PFQYSNALV
Sbjct: 1  MPLSLLLLSLFGVLFSPSNSLSLSFPLTSHSVSSQEASLSLSSKTKSHGKLPFQYSNALV 60

Query: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPNSRFYP 98
          VSVPIGSPPQQMDMVVDTGSQLSWIQCHGK       P
Sbjct: 61 VSVPIGSPPQQMDMVVDTGSQLSWIQCHGKVRRKSVKP 98

[Close]

BLAST of Csor.00g123150 vs. TAIR 10
Match: AT1G66180.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 70.9 bits (172), Expect = 6.9e-13
Identity = 50/109 (45.87%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 6   LFLSLFCLLFSPSNSLSLSLPLTYHSVS----SQEASLSLSSKTKSHGKFP-------FQ 65
           LF   F    S S SLSL LPLT   +S    S   + SL S+       P       F+
Sbjct: 8   LFFFFFLNYVSLSTSLSLHLPLTSLPISTTTNSHRFTTSLLSRKNPSPSSPPYNFRSRFK 67

Query: 66  YSNALVVSVPIGSPPQQMDMVVDTGSQLSWIQCHGK----TPNSRFYPS 100
           YS AL++S+PIG+PPQ   MV+DTGSQLSWIQCH K     P + F PS
Sbjct: 68  YSMALIISLPIGTPPQAQQMVLDTGSQLSWIQCHRKKLPPKPKTSFDPS 116

[Close]

BLAST of Csor.00g123150 vs. TAIR 10
Match: AT5G37540.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-09
Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 3   LSLLFLSLFCLLFSPSNSLSLSLPLTYHSVSSQEASLS-----LSSKTKSHGKFPF---- 62
           L + F   + +  S S+SLSL  PLT   ++    S S     LS +  S    P+    
Sbjct: 13  LYIFFFFCYSVSLSWSSSLSLHFPLTSLRLTPTTNSSSFKTSLLSRRNPSPPSSPYTFRS 72

Query: 63  --QYSNALVVSVPIGSPPQQMDMVVDTGSQLSWIQCHGK-------TPNSRFYPS 100
             +YS AL++S+PIG+P Q  ++V+DTGSQLSWIQCH K        P + F PS
Sbjct: 73  NIKYSMALILSLPIGTPSQSQELVLDTGSQLSWIQCHPKKIKKPLPPPTTSFDPS 127

[Close]

BLAST of Csor.00g123150 vs. TAIR 10
Match: AT2G39710.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 57.8 bits (138), Expect = 6.0e-09
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 16 SPSNSLSLS------------LPLTYHSVSSQEASLSLSSKTK-----SHGKFPFQYSNA 75
          S S+SLSLS             PLT+   SS   +L  S KT+     S  K  F+++  
Sbjct: 5  SSSSSLSLSKNFLRISVLLLIFPLTFCKTSSTNQTLLFSLKTQKLPQSSSDKLSFRHNVT 64

Query: 76 LVVSVPIGSPPQQMDMVVDTGSQLSWIQCHGKTPN 94
          L V++ +G PPQ + MV+DTGS+LSW+ C  K+PN
Sbjct: 65 LTVTLAVGDPPQNISMVLDTGSELSWLHCK-KSPN 98

[Close]

BLAST of Csor.00g123150 vs. TAIR 10
Match: AT5G02190.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 51.6 bits (122), Expect = 4.3e-07
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 12  CLLFSPSNSLSLSLPLTYHSVSSQEASLSLSSKT-----KSHGKFPFQYSNALVVSVPIG 71
           C+  S S+S S S      S SSQ   L L ++      +   K  F ++  L V++ +G
Sbjct: 21  CVSSSSSSSSSFSFSSFSSSSSSQTLVLPLKTRITPTDHRPTDKLHFHHNVTLTVTLTVG 80

Query: 72  SPPQQMDMVVDTGSQLSWIQCH-GKTPN 94
           +PPQ + MV+DTGS+LSW++C+    PN
Sbjct: 81  TPPQNISMVIDTGSELSWLRCNRSSNPN 108

The following BLAST results are available for this feature:

BLAST of Csor.00g123150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZL3	6.1e-06	36.36	Aspartic proteinase PCS1 OS=Arabidopsis thaliana OX=3702 GN=PCS1 PE=2 SV=1	[more]

BLAST of Csor.00g123150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607568.1	2.76e-63	100.00	hypothetical protein SDJN03_00910, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6607570.1	9.31e-50	92.86	Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6607571.1	2.28e-49	92.86	Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6607573.1	3.25e-45	88.78	Aspartic proteinase PCS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023523298.1	1.78e-44	95.56	aspartic proteinase PCS1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g123150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWZ6	3.37e-44	87.76	aspartic proteinase PCS1-like OS=Cucurbita moschata OX=3662 GN=LOC111438863 PE=3...	[more]
A0A6J1F0M7	3.37e-44	87.76	aspartic proteinase PCS1-like OS=Cucurbita moschata OX=3662 GN=LOC111438404 PE=3...	[more]
A0A6J1ICW1	9.36e-44	86.73	aspartic proteinase PCS1-like OS=Cucurbita maxima OX=3661 GN=LOC111471394 PE=3 S...	[more]
A0A6J1I612	9.36e-44	86.73	aspartic proteinase PCS1-like OS=Cucurbita maxima OX=3661 GN=LOC111471392 PE=3 S...	[more]
A0A6J1IBE7	9.36e-44	86.73	aspartic proteinase PCS1-like OS=Cucurbita maxima OX=3661 GN=LOC111471393 PE=3 S...	[more]

BLAST of Csor.00g123150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66180.1	6.9e-13	45.87	Eukaryotic aspartyl protease family protein	[more]
AT5G37540.1	1.2e-09	39.13	Eukaryotic aspartyl protease family protein	[more]
AT2G39710.1	6.0e-09	40.00	Eukaryotic aspartyl protease family protein	[more]
AT5G02190.1	4.3e-07	36.36	Eukaryotic aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032861	Xylanase inhibitor, N-terminal	PFAM	PF14543	TAXi_N	coord: 60..91 e-value: 1.1E-8 score: 35.5
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 52..102 e-value: 8.8E-10 score: 40.8
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 1..92
IPR001461	Aspartic peptidase A1 family	PANTHER	PTHR47965	ASPARTYL PROTEASE-RELATED	coord: 20..94
None	No IPR available	PANTHER	PTHR47965:SF51	EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN	coord: 20..94
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 74..85
IPR033121	Peptidase family A1 domain	PROSITE	PS51767	PEPTIDASE_A1	coord: 59..102 score: 13.149508

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g123150.m01	Csor.00g123150.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity