Csor.00g118660 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g118660
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr04: 21054624 .. 21055004 (+)
RNA-Seq ExpressionCsor.00g118660
SyntenyCsor.00g118660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGACGGAAGGATCCGGTAGAAACCAAAGGGTTTTGCAGATCAGAGAGGGGTTCGAGGACCGGAGCCGGCAGAGCCGCTTTGGCGCTTTGTTCTTCAATTCCTCAGTTACGCCTCAGAATTCCGAAATTAATCTAAACCAACCGAAACAACTGGATGTCGGTGATTTCTTCAAAACTGTGGAGAGAATGAGGAATGTCTTTCTTCTCCGGAGGATTGAATTTGCATACTGTTGGTTTGATTGGAAGAAAGAGAATCAGCTGATCTTCATGTATCGTCAACAACGTAGCAAGCACAGCACCCGCGAGAAAGGCCTCTGCCTTCTATTTACTTTCCAACGATCTTCCTCTTCTTCTTTTCCTTTTTCCTCAGTTTAG

mRNA sequence

ATGGAAGAGACGGAAGGATCCGGTAGAAACCAAAGGGTTTTGCAGATCAGAGAGGGGTTCGAGGACCGGAGCCGGCAGAGCCGCTTTGGCGCTTTGTTCTTCAATTCCTCAGTTACGCCTCAGAATTCCGAAATTAATCTAAACCAACCGAAACAACTGGATGTCGGTGATTTCTTCAAAACTGTGGAGAGAATGAGGAATGTCTTTCTTCTCCGGAGGATTGAATTTGCATACTGTTGGTTTGATTGGAAGAAAGAGAATCAGCTGATCTTCATGTATCGTCAACAACGTAGCAAGCACAGCACCCGCGAGAAAGGCCTCTGCCTTCTATTTACTTTCCAACGATCTTCCTCTTCTTCTTTTCCTTTTTCCTCAGTTTAG

Coding sequence (CDS)

ATGGAAGAGACGGAAGGATCCGGTAGAAACCAAAGGGTTTTGCAGATCAGAGAGGGGTTCGAGGACCGGAGCCGGCAGAGCCGCTTTGGCGCTTTGTTCTTCAATTCCTCAGTTACGCCTCAGAATTCCGAAATTAATCTAAACCAACCGAAACAACTGGATGTCGGTGATTTCTTCAAAACTGTGGAGAGAATGAGGAATGTCTTTCTTCTCCGGAGGATTGAATTTGCATACTGTTGGTTTGATTGGAAGAAAGAGAATCAGCTGATCTTCATGTATCGTCAACAACGTAGCAAGCACAGCACCCGCGAGAAAGGCCTCTGCCTTCTATTTACTTTCCAACGATCTTCCTCTTCTTCTTTTCCTTTTTCCTCAGTTTAG

Protein sequence

MEETEGSGRNQRVLQIREGFEDRSRQSRFGALFFNSSVTPQNSEINLNQPKQLDVGDFFKTVERMRNVFLLRRIEFAYCWFDWKKENQLIFMYRQQRSKHSTREKGLCLLFTFQRSSSSSFPFSSV
Homology
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BLAST of Csor.00g118660 vs. NCBI nr
Match: KAG6602720.1 (hypothetical protein SDJN03_07953, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251 bits (641), Expect = 5.02e-84
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 1   MEETEGSGRNQRVLQIREGFEDRSRQSRFGALFFNSSVTPQNSEINLNQPKQLDVGDFFK 60
           MEETEGSGRNQRVLQIREGFEDRSRQSRFGALFFNSSVTPQNSEINLNQPKQLDVGDFFK
Sbjct: 1   MEETEGSGRNQRVLQIREGFEDRSRQSRFGALFFNSSVTPQNSEINLNQPKQLDVGDFFK 60

Query: 61  TVERMRNVFLLRRIEFAYCWFDWKKENQLIFMYRQQRSKHSTREKGLCLLFTFQRSSSSS 120
           TVERMRNVFLLRRIEFAYCWFDWKKENQLIFMYRQQRSKHSTREKGLCLLFTFQRSSSSS
Sbjct: 61  TVERMRNVFLLRRIEFAYCWFDWKKENQLIFMYRQQRSKHSTREKGLCLLFTFQRSSSSS 120

Query: 121 FPFSSV 126
           FPFSSV
Sbjct: 121 FPFSSV 126

The following BLAST results are available for this feature:
BLAST of Csor.00g118660 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g118660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602720.15.02e-84100.00hypothetical protein SDJN03_07953, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g118660 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g118660 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g118660.m01Csor.00g118660.m01mRNA