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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGTAAACGATACGGGGTGGTCGAGAACTACTATAGGGAATTGATAGCAATTTTCATCCCAGCTTGGCAGTGGCCTGGAGTGGTGCATATGAAGAAGTTCTGTCCTCTTGAGAGCATGATTTCATCCTTGCCTGAATTGAACACTTTGGCGCCTCTTGGAGCTATGCAGCTTCTATATCCCCCCTCATCCACTGCCACCACGTTGTGAACGGTTGGGATATAGTTGAATCCTACAAAAAAAAAAAAAAAAAAAATAATGTATCTATTCGTTTAGTTTATTATCAACGATCTAACTGCGAATTCGATCGATCGGATACTATTTGAATATATTTTATATAATCGTAATGTAACGACAGGCTTTCCCTCAAGGCTTTAAAACGAGTGGACTTGTGTTTTGATATAATTTATCTTATCTTCGGGATTTGGTTAGTAGAATATTTTCTCTTTTCTCGAACTTTCGATCCCACTTCTGTTTTTCATTTTTAACATAGTATCAAAGCATCATTCTTAACAAATACGATTACGCAAGTAAAACATCAGTTACTATTCAACTATCAAAACGAGAGTTGAAAACTCACTTAATATGTCACCGGCTCTAAACACCTTGCCATTAGGCCATCCTTCCGTGCCCAGGTTCCATCCGTTCGAGTCGCCAACAACAAAAGTTGTAGCAGCATCGCCATGTTCGAAGCCAGTCAGTCAGCAGCAGCAACGCCATTACAACAGCCACCGTGCTCATCGAAACCGCTCCGCTGCTCCCCTCGTGTCGAGCCATTCGTGAAGTCGAAGTAG mRNA sequence ATGTGTAAACGATACGGGGTGGTCGAGAACTACTATAGGGAATTGATAGCAATTTTCATCCCAGCTTGGCAGTGGCCTGGAGTGGTGCATATGAAGAAGTTCTGTCCTCTTGAGAGCATGATTTCATCCTTGCCTGAATTGAACACTTTGGCGCCTCTTGGAGCTATGCAGCTTCTATATCCCCCCTCATCCACTGCCACCACGCCATCCTTCCGTGCCCAGGTTCCATCCGTTCGAGTCGCCAACAACAAAAGTTGTAGCAGCATCGCCATGTTCGAAGCCAGTCAGTCAGCAGCAGCAACGCCATTACAACAGCCACCGTGCTCATCGAAACCGCTCCGCTGCTCCCCTCGTGTCGAGCCATTCGTGAAGTCGAAGTAG Coding sequence (CDS) ATGTGTAAACGATACGGGGTGGTCGAGAACTACTATAGGGAATTGATAGCAATTTTCATCCCAGCTTGGCAGTGGCCTGGAGTGGTGCATATGAAGAAGTTCTGTCCTCTTGAGAGCATGATTTCATCCTTGCCTGAATTGAACACTTTGGCGCCTCTTGGAGCTATGCAGCTTCTATATCCCCCCTCATCCACTGCCACCACGCCATCCTTCCGTGCCCAGGTTCCATCCGTTCGAGTCGCCAACAACAAAAGTTGTAGCAGCATCGCCATGTTCGAAGCCAGTCAGTCAGCAGCAGCAACGCCATTACAACAGCCACCGTGCTCATCGAAACCGCTCCGCTGCTCCCCTCGTGTCGAGCCATTCGTGAAGTCGAAGTAG Protein sequence MCKRYGVVENYYRELIAIFIPAWQWPGVVHMKKFCPLESMISSLPELNTLAPLGAMQLLYPPSSTATTPSFRAQVPSVRVANNKSCSSIAMFEASQSAAATPLQQPPCSSKPLRCSPRVEPFVKSK
Homology
BLAST of Csor.00g118280 vs. NCBI nr
Match: KAG6607682.1 (hypothetical protein SDJN03_01024, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255 bits (651), Expect = 1.50e-85 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MCKRYGVVENYYRELIAIFIPAWQWPGVVHMKKFCPLESMISSLPELNTLAPLGAMQLLY 60
MCKRYGVVENYYRELIAIFIPAWQWPGVVHMKKFCPLESMISSLPELNTLAPLGAMQLLY
Sbjct: 1 MCKRYGVVENYYRELIAIFIPAWQWPGVVHMKKFCPLESMISSLPELNTLAPLGAMQLLY 60
Query: 61 PPSSTATTPSFRAQVPSVRVANNKSCSSIAMFEASQSAAATPLQQPPCSSKPLRCSPRVE 120
PPSSTATTPSFRAQVPSVRVANNKSCSSIAMFEASQSAAATPLQQPPCSSKPLRCSPRVE
Sbjct: 61 PPSSTATTPSFRAQVPSVRVANNKSCSSIAMFEASQSAAATPLQQPPCSSKPLRCSPRVE 120
Query: 121 PFVKSK 126
PFVKSK
Sbjct: 121 PFVKSK 126
BLAST of Csor.00g118280 vs. NCBI nr
Match: KAF2599840.1 (hypothetical protein F2Q68_00011348 [Brassica cretica] >KAF3555898.1 hypothetical protein F2Q69_00010892 [Brassica cretica]) HSP 1 Score: 73.6 bits (179), Expect = 1.89e-14 Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0
Query: 7 VVENYYRELIAIFIPAWQWPGVVHMKKFCPLESMISSLPELNTLAPLGAMQLLYPPSSTA 66
+++ + AIFI A QWPG + MKKFCPL+ +I S PE+ LA G +QLLYPP STA
Sbjct: 1 MIDQDQTAVTAIFIAASQWPGKLQMKKFCPLDKVIRSFPEVYVLARAGVLQLLYPPLSTA 60
Query: 67 TT 68
TT
Sbjct: 61 TT 62
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6607682.1 | 1.50e-85 | 100.00 | hypothetical protein SDJN03_01024, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAF2599840.1 | 1.89e-14 | 54.84 | hypothetical protein F2Q68_00011348 [Brassica cretica] >KAF3555898.1 hypothetica... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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