Csor.00g116360 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g116360
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DEAD-box ATP-dependent RNA helicase
Location	Csor_Chr07: 562185 .. 567430 (+)
RNA-Seq Expression	Csor.00g116360
Synteny	Csor.00g116360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGAAGCAGAAGCGAAAGAGCATTCCTGTTCTACCATGGATGCGAAGCCCTGTGGATGTGTCTCTATTCGAGGAATGCCCTCTTGAGATCCTCCCTTCGCTCGACCCCAGGCAGTTTCCTCTTTCTTCCTACTCATTTGAACTTTCAATCTGGTCTATGGCTTCAAATTTACTTCTATTACTTCTATTTGATATTCATCATATATAGCAATCCGTTGGATGCAAGTGAATCTACTGTTGGTTGTCTCTTTGAAGATTTGGCGAGTAGTAAAATGTTGTTTACGTTTAAAAGAGCACAGGCCTAATAGTAATATATATATATATATGTGAATTGTATAGATGGCAATTGAATGTTCGCTTATTCCTGTATTGCTTAGATTATGCTCCATATGTTTAGATTATCAAGTTTTATATTCTTGTATCGATCTCTTCCTCAAGGGTCGATTTTTAACGTTTTTTTTTTTTAATGATAATTTTGTTTCCTTTTCTAGATTGAAGGCAGCTTTGCAGAACATGGGCATCTCTTCACTGTTCCCAGTGCAACTTGCAGTTTGGCAAGAGGCGATAGGGCCTGGTTCGTTTGAGAGAGATCTATGTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCCCTACCGATAGTGCAAATGCTTTCAAGTCGTACAGTCAAATGCTTACGTGCTTTAGTTGTGTTGCCTACTCGTGATCTGGCCTTGCAGGTATTTTTATTGCCATTACTTTTTTTTGTATGCATAAATTCATGTTACAAGTTTCTGGTTTATTGGTTTGAAGTGCACTATTTTAGTATAATGTAGGTTCATTCTAAAATCTGTCCAAGAACCTTGACAATGAAATAATAAAATATGAAAATGAGAGCAGACTTCTTTTTCTGGTTTTTGGATTGACTCTCACCTGCTTAGCATTCTAATATGAATACGTGCTTATTTTAGAAGAAAATTTTCTTCATGTTCTTATTGGGTCATGGCTCTCTTTAACAAGGTGAAAGAGGTTTTTGCTGCGATTGCACCTGCAGTGGGCTTATCTGTAGGTCTGGCTGTGGGTCAATCCTCCATAGCAGATGAGATTGCTGGTCTCATCAAGAGACCTAAGCTTGAGGCGGGCATCTGTTATGATCCAGAAGATTTTTCGGTTCAGCTGCAGAGTTCTGTGGACATATTGGTGGCAACACCGGGAAGATTGATGGACCATATTAACTTCACGAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTAAGTACTCATAGTGTTGTTATAACCGCAGATTTGTAATTACATTTATATTGGAGGAGGCTTAATGCTGATGCCATATGCAGTGGTGAATGTCTTTTGAAAAAGAGATATACTGTGTTAAGTGGTGAATGTCTTTTAATGTATATTTGTTCTCATTACATAAATTTTACGTTTCACAGCCTGCAAGTGTTTCTTATTAAATTAGCTGATTGAACTATAGCCTAAATCAATATTTCTTTATTAGTATGAAAATTAATTTTTAAAAATCAATATAGCTGTGATGGGTGATTGAGCCTACATAATTTCTTTTCTCGGTGAATTTTTCTCTATTGTTGATTGTATCCTGCTCAGTGCACACCAAAACAAAACTTCCTATCTATTTATTGAGTCTACTTCTTGTCTTACTTCATCTTGAAGTCATCTCTCACCTCCTTTTTGTAATTATAGTTTATCTACCCTACAATCTTAATGGAGATGTTTTTCGTGATTATCTTCGATGAGACTATCTTTTGTATCTATTTCATACATCAATGAAATGGTTTCAGTTTCCCATAAAAAATGTTGTTAGTTAGCCTATGTGCTACAGTTTTATGGAGAGCTCACCACCCTCTCGAATTGGTATGCTGTTGTGCATTGTTATCCTGAATATTGAAGTAATCTCATTGTGAGGAGAAACCTTAAAGATTATTTTAACTTGTACCAAAATTTGAGCTATTGTTGTCTCAATACAATCTGTTGATGAGATATGTGATTTCAGGTTATTGATGAAACTGATAGGTTATTAAGGGAATCATATCAATCTTGGCTACCTACTGTGCTTCAGTTGACGCATGTTGATGATGAGAATATTATCTTTCCTTCCTACACTTCACTTCCTTGTTCTGCTGGATCCTTAAAAACCAAAAGGAGATTGTAAGTTCTAACTTCTCGTAATTATGGTTATACTTTTGAAGTATTGTACATAATTGTTATTACTAGTCCTCCTAATCATTTTTATCTCTGACACATTTTGGTTTTCTCAAAATGTCATGTGGTATAAAACTGTAGTCCTGATTGCAGATACTGTTGAATTAATGCAGTGGTATAGAGAGGGGTTTTAAGGGTGCATGTTACCCAAGGTTCTCAAAGATGGTTCTATCTGCAACGCTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCGCCCTCTATTCTTAACTACTGGGAAAAGAAGATACAAACTTCCAGAGAAATTAGAATCATACATGACGGTAAATTGGCTTGTCTCATAATTAATCTGGGATTGAATCAATTTTTGGGTGCTCGTTTAGAAAGGAAAAAGTGTATGCTTAACCATAGAAATGGGACACCCTTGATCTTAGAAGGGGATTTCACTGACCTTGGGATTTGGATGCCATTTGTCTTAAACAATCGTACTTGTTGATTGTTGACAACAGGATACTAGGAGATATATTTCCCAACTGTTAAGTTTGCTTCATTTCATGTCCATCGTCAATTTCCATAATGATAGATCCTATAATTATTGGTTCTATTTATATCTTTTATATCTTCTTGTTGTATCAAAAAAGTTACTGTTCCATGTGAAGAAACGTTATGATACACAACTCAGTCTATATAATTTTCTTTCTTTCTTTTCCTTTTTCTTATAGAATTTTTTAAGCCTTTTATCCGTACCTTCCCTATTACCTGATGTTAAACCAGATGACTAAATTTTTTGTCTTGGCTTCTCTTAGACCTTAGTCAATGGCCGATACCATGACATTTGGACAATGATGATAAAGGGGATAATGTTTCATAAGCTTTGTTTACATAGTTAATACTTATTTATCAACCTTTTAGTTTCAAATTGTTTCTTCGCAGATTTGTGAATCAAAACTCAAACCATTATATCTGGTTGCCCTACTTCAAAGCTTAGGAGGAGAAAAGTGTATTGTTTTTACATCCTCTGTGGAGTCTACTCATCGACTATGTACATTACTAAACTTCTTCGATGACTTGCAACTCGAGATCAAAGAGTATTCGGGGCTTCAACGTCAATCATTGAGAAGGTAACACAGGAAGATTGTTTTTTTAGCTTAAGTGTGTTCTTCCCCATTTAAGTATTGCCAGAAGTAATTGAAGCATGTGAAATATGAAGCCTAAGACTTCTCTTATTTTCTTGGACTATGGTTCATGGACTTCATAGTCAGCCCTACTTGTTTTCTTTGCCACAAGCTTCCGACATAAGAAATTATAATGTTATAATGTAGAATACTGCTTCAGATTATTCTACAATTAAATGTGGACCAGGTCTGTTTCGTAGAATGTTTTCTTTTTACTGGAAAATGCTGATATATGTGTATGAAAATCTGTCTTTAATTGACACTCTTTAGCTGACTTTACATCGATGAGCATTTTTGTCCCATGGAGATCATCACTTTATGGGTTGCTGTATGTACCATTTATCATTTTAATCTCTGGACATGTTCATATTTGAGCATAACACAGTTTTGCTTTCATTCTCTCTGCTGTTCATTATATTTCGATACCTGGTGTTTAAATTGACATATGTTCTGCAGCAAAACACTGAATGCTTTCCGGGGAGGGGAGGTTCAAGTACTTGTTAGTTCTGATGCCATGACTCGTGGAATGGACGTTGAGGGTGTGAGAAATGTTATTAATTATGATATGCCTGCGTTTATTAAGACATATATCCATCGAGCTGGTCGGACTGCAAGGGCTGGGCAATCTGGGCGCTGTTTCACATTGCTGAGTAAAGATGAGGTATTTTATGCTCAAGCCTCCATGATTAAATTATATTATTAACATACATAGCTTGCAATTAATTCTTCTGTAAGTCTATGCCTTAATCAGCCATGAATTGGCTTTATTTCTTCACTTTTGTCCTCTGGCTGCCATCTGGGTTAACACGATTTCATCTATGTAGTTGTCATGTACATATAATACAACAGTAATACTATTTTACCTTGGGCTTTATACAATGCTATGGTAATGCATAAACCATAAGGAAATACTTACTGGTTTGTAATTTAGTTAGAAGGTGAAATCCTGTTTGGTTTGAGCTTTCTTCGTTTCTGATTGAAAATGATAATGTTGAATAGTTGAGCTATATATCGTAGTCCAACTTGCTTATTCTTAGGTTCTTATGTTTCAGGTTCGACGCTTCAAGAAATTACTACAAAAGGCTGATAATGATTCTTGTCCCGTACATTCCCTACCTTCCAGTTCAATTGAGTTGCTCCAGCCTACTTACGTCTCTGGTAACACGTCATCTCTTTTGATTATTCAGTAAAAACTGCCTTATCTAGCTGAAGTAATTGAAGTTGTTAGGCCCCATAATTTTGTTAGAAAAGGGAATAGGTTAAACTTTAAAAACCGAATTGTTGCAAATTCCTTTGTTTTGTGCATCAAATCTACATTGCTGTTTCCACATTATCCAAATGTAAAGAAGGCAGGATTAATTTGTTGGGAGGACGTGTTGATTTCAATGAAGCTGTAGCATAAATAAATAAATAATATATTTTTTTTTCATGTGAATGGTTTGTAAATGTTTTGTTCATTTTGATTCCTAATGATTAACAGCCCTGGAGAAACTAAAGGAAAAAGTTGAATCAGAAAGATCCAGAAAGAGCACAATCATGTCTTCTAGAGTTGGCAAACGGAAAGATACGAACTCCTCCAATGAAAAGGTTGGTATTAACAATCAAGCTTCTCTGAGAGAGTAAAGTCCCATTTTGTAATTTATGAAAAACAACTTGAATTGCTAGCTGTGTTGGGAAAGATTAAATGGCAGTCGTGATTTAATGTCTATCCGTAGCGTAAAACAAAAACACCACTACTTAATCTTCCTTGTTCCTTTGACTAATCTGCATTGAAACTAATTGACTGAAAGACAGTATTCTTAAGCATTAGAACATTACAAAATCCTCATTAAACTCGACTAATTATACATATGGTTTCATTACAGTCTTAG

mRNA sequence

ATGGTGGAGAAGCAGAAGCGAAAGAGCATTCCTGTTCTACCATGGATGCGAAGCCCTGTGGATGTGTCTCTATTCGAGGAATGCCCTCTTGAGATCCTCCCTTCGCTCGACCCCAGATTGAAGGCAGCTTTGCAGAACATGGGCATCTCTTCACTGTTCCCAGTGCAACTTGCAGTTTGGCAAGAGGCGATAGGGCCTGGTTCGTTTGAGAGAGATCTATGTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCCCTACCGATAGTGCAAATGCTTTCAAGTCGTACAGTCAAATGCTTACGTGCTTTAGTTGTGTTGCCTACTCGTGATCTGGCCTTGCAGGTGAAAGAGGTTTTTGCTGCGATTGCACCTGCAGTGGGCTTATCTGTAGGTCTGGCTGTGGGTCAATCCTCCATAGCAGATGAGATTGCTGGTCTCATCAAGAGACCTAAGCTTGAGGCGGGCATCTGTTATGATCCAGAAGATTTTTCGGTTCAGCTGCAGAGTTCTGTGGACATATTGGTGGCAACACCGGGAAGATTGATGGACCATATTAACTTCACGAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTTATTGATGAAACTGATAGGTTATTAAGGGAATCATATCAATCTTGGCTACCTACTGTGCTTCAGTTGACGCATGTTGATGATGAGAATATTATCTTTCCTTCCTACACTTCACTTCCTTGTTCTGCTGGATCCTTAAAAACCAAAAGGAGATTTGGTATAGAGAGGGGTTTTAAGGGTGCATGTTACCCAAGGTTCTCAAAGATGGTTCTATCTGCAACGCTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCGCCCTCTATTCTTAACTACTGGGAAAAGAAGATACAAACTTCCAGAGAAATTAGAATCATACATGACGATTTGTGAATCAAAACTCAAACCATTATATCTGGTTGCCCTACTTCAAAGCTTAGGAGGAGAAAAGTGTATTGTTTTTACATCCTCTGTGGAGTCTACTCATCGACTATGTACATTACTAAACTTCTTCGATGACTTGCAACTCGAGATCAAAGAGTATTCGGGGCTTCAACGTCAATCATTGAGAAGCAAAACACTGAATGCTTTCCGGGGAGGGGAGGTTCAAGTACTTGTTAGTTCTGATGCCATGACTCGTGGAATGGACGTTGAGGGTGTGAGAAATGTTATTAATTATGATATGCCTGCGTTTATTAAGACATATATCCATCGAGCTGGTCGGACTGCAAGGGCTGGGCAATCTGGGCGCTGTTTCACATTGCTGAGTAAAGATGAGGTTCGACGCTTCAAGAAATTACTACAAAAGGCTGATAATGATTCTTGTCCCGTACATTCCCTACCTTCCAGTTCAATTGAGTTGCTCCAGCCTACTTACGTCTCTGCCCTGGAGAAACTAAAGGAAAAAGTTGAATCAGAAAGATCCAGAAAGAGCACAATCATGTCTTCTAGAGTTGGCAAACGGAAAGATACGAACTCCTCCAATGAAAAGTCTTAG

Coding sequence (CDS)

ATGGTGGAGAAGCAGAAGCGAAAGAGCATTCCTGTTCTACCATGGATGCGAAGCCCTGTGGATGTGTCTCTATTCGAGGAATGCCCTCTTGAGATCCTCCCTTCGCTCGACCCCAGATTGAAGGCAGCTTTGCAGAACATGGGCATCTCTTCACTGTTCCCAGTGCAACTTGCAGTTTGGCAAGAGGCGATAGGGCCTGGTTCGTTTGAGAGAGATCTATGTATTAATTCACCAACTGGAAGTGGGAAAACTTTAGCTTATGCCCTACCGATAGTGCAAATGCTTTCAAGTCGTACAGTCAAATGCTTACGTGCTTTAGTTGTGTTGCCTACTCGTGATCTGGCCTTGCAGGTGAAAGAGGTTTTTGCTGCGATTGCACCTGCAGTGGGCTTATCTGTAGGTCTGGCTGTGGGTCAATCCTCCATAGCAGATGAGATTGCTGGTCTCATCAAGAGACCTAAGCTTGAGGCGGGCATCTGTTATGATCCAGAAGATTTTTCGGTTCAGCTGCAGAGTTCTGTGGACATATTGGTGGCAACACCGGGAAGATTGATGGACCATATTAACTTCACGAAAGGGTTTACTCTTCAGCATCTACGTTATCTTGTTATTGATGAAACTGATAGGTTATTAAGGGAATCATATCAATCTTGGCTACCTACTGTGCTTCAGTTGACGCATGTTGATGATGAGAATATTATCTTTCCTTCCTACACTTCACTTCCTTGTTCTGCTGGATCCTTAAAAACCAAAAGGAGATTTGGTATAGAGAGGGGTTTTAAGGGTGCATGTTACCCAAGGTTCTCAAAGATGGTTCTATCTGCAACGCTTACACAGGATCCAGGCAAGCTTGCTCAGCTTGATCTGCATCGCCCTCTATTCTTAACTACTGGGAAAAGAAGATACAAACTTCCAGAGAAATTAGAATCATACATGACGATTTGTGAATCAAAACTCAAACCATTATATCTGGTTGCCCTACTTCAAAGCTTAGGAGGAGAAAAGTGTATTGTTTTTACATCCTCTGTGGAGTCTACTCATCGACTATGTACATTACTAAACTTCTTCGATGACTTGCAACTCGAGATCAAAGAGTATTCGGGGCTTCAACGTCAATCATTGAGAAGCAAAACACTGAATGCTTTCCGGGGAGGGGAGGTTCAAGTACTTGTTAGTTCTGATGCCATGACTCGTGGAATGGACGTTGAGGGTGTGAGAAATGTTATTAATTATGATATGCCTGCGTTTATTAAGACATATATCCATCGAGCTGGTCGGACTGCAAGGGCTGGGCAATCTGGGCGCTGTTTCACATTGCTGAGTAAAGATGAGGTTCGACGCTTCAAGAAATTACTACAAAAGGCTGATAATGATTCTTGTCCCGTACATTCCCTACCTTCCAGTTCAATTGAGTTGCTCCAGCCTACTTACGTCTCTGCCCTGGAGAAACTAAAGGAAAAAGTTGAATCAGAAAGATCCAGAAAGAGCACAATCATGTCTTCTAGAGTTGGCAAACGGAAAGATACGAACTCCTCCAATGAAAAGTCTTAG

Protein sequence

MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS

Homology

[Close]

BLAST of Csor.00g116360 vs. ExPASy Swiss-Prot
Match: Q7FGZ2 (DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana OX=3702 GN=RH1 PE=2 SV=3)

HSP 1 Score: 698.7 bits (1802), Expect = 4.8e-200
Identity = 352/494 (71.26%), Postives = 414/494 (83.81%), Query Frame = 0


Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE 62
           ++ K +   V+PWMR+PVDVS  E C L+ LP L+P+LK AL+NMGISSLFPVQ+AVW E
Sbjct: 5   KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64

Query: 63  AIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
            IGPG FERD+C+NSPTGSGKTL+YALPIVQ+L+SR V+CLRALVVLPTRDLALQVK+VF
Sbjct: 65  TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124

Query: 123 AAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPG 182
            AIAPAVGLSVG AVGQSSIA EI+ LIK PKL+AGICYDP+D S  L+S+VDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184

Query: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS-L 242
           RLMDHIN TKGFTL+HLRYLV+DETDRLLRE+YQSWLPTVLQLT   D++ +FPS+T  +
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDS-LFPSFTPFV 244

Query: 243 PCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 302
           P + GSL+T RR  +ERGFKG  YPR  KMVLSATLTQDP KL QLDLH PLF+TTG  R
Sbjct: 245 PSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSR 304

Query: 303 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 362
           Y+LPEKLE    ICE+ +KP+YLVALL+S  GEKCI+FTSSVE+T RLC LLNFF D ++
Sbjct: 305 YRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKI 364

Query: 363 EIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 422
           + KEYSG   QSLRSK L AFR G++QVLV+SDA+TRGMDV+GV NVINYDMP F KT+I
Sbjct: 365 KAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFI 424

Query: 423 HRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 482
           HRAGRTARAGQ+GRCFTLLS  EVRRF KLL+K  +DSCP++ +P +S++ ++ TY  AL
Sbjct: 425 HRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPAL 484

Query: 483 EKLKEKVESERSRK 496
           EKLKE VESE  +K
Sbjct: 485 EKLKELVESEAPKK 497

[Close]

BLAST of Csor.00g116360 vs. ExPASy Swiss-Prot
Match: Q0DWT8 (DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0795900 PE=2 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 1.1e-177
Identity = 315/502 (62.75%), Postives = 387/502 (77.09%), Query Frame = 0


Query: 10  IPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSF 69
           +P LPWMR+PVD+  F  CP+  LP LDPRL   LQ MGI S FPVQ+A W E IGPG+F
Sbjct: 18  VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 77

Query: 70  ERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFAAIAPAV 129
           ERD+CINSPTGSGKTLAYALPIVQML++R V+CLRALVVLPTRDLALQVKEVF AIAP V
Sbjct: 78  ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 137

Query: 130 GLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHIN 189
           GLSVG AVGQSSIADE++ LI++ K       D E   ++ Q+ VDILVATPGRLMDHI+
Sbjct: 138 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 197

Query: 190 FTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLK 249
            TKGF+L+HL+YLV+DETDR+LRE+YQSWLPTV+QLT   D+N  +            L 
Sbjct: 198 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG-ETLLHPLT 257

Query: 250 TKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRYKLPEKLE 309
           T RR G+ERGFKG  +PR +K+VLSATLTQDP KL+QL+L  PL L +GK+RY++P KL+
Sbjct: 258 TIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQ 317

Query: 310 SYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGL 369
           SY  +C+S LKPL L+ LLQ L GEKC+VFTSSVES+HRL TLL FF+DL  +  EYS L
Sbjct: 318 SYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRL 377

Query: 370 QRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTAR 429
           QR+S R KTL+AF+ G++ VL+ +D M RG+ ++G+R VINYDMP ++KTYIHRAGRTAR
Sbjct: 378 QRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTAR 437

Query: 430 AGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVE 489
           AG+SG CFT L K EV+ F K+L+KADN SC +HSLP  S+E L+P + SAL+KL+E +E
Sbjct: 438 AGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKKLEESLE 497

Query: 490 SERSRKSTI--MSSRVGKRKDT 510
           SE ++KS     +    KRK T
Sbjct: 498 SEATKKSKSGDKAPNASKRKRT 518

[Close]

BLAST of Csor.00g116360 vs. ExPASy Swiss-Prot
Match: Q8N8A6 (ATP-dependent RNA helicase DDX51 OS=Homo sapiens OX=9606 GN=DDX51 PE=1 SV=3)

HSP 1 Score: 312.8 bits (800), Expect = 7.4e-84
Identity = 198/524 (37.79%), Postives = 292/524 (55.73%), Query Frame = 0


Query: 3   EKQKRKSIPVLP-WMRSP--VDVSLFEE-CPLEILPSLDPRLKAALQNMGISSLFPVQLA 62
           +++  K  P LP W+  P  V  ++ E+  P+E +P + P L+  L+  GISS FPVQ A
Sbjct: 168 KRKAPKVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAA 227

Query: 63  VWQE---------AIGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVV 122
           V             +G G +   DLC+++PTGSGKTLA+ +P+VQ L SR V  +RALVV
Sbjct: 228 VIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVV 287

Query: 123 LPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSV 182
           LPT++LA QV +VF     A  L V L  GQ S+A E   L+++              + 
Sbjct: 288 LPTKELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKT-------------AD 347

Query: 183 QLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHV 242
             +   DI+VATPGRL+DHI+ T GF+LQ LR+L+IDE DR++   +QSWLP V+     
Sbjct: 348 GYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFQ 407

Query: 243 DDENIIFPSYTSLPCSAGSLKTKRRFGIERGFKGACYPR--FSKMVLSATLTQDPGKLAQ 302
            ++        + PC+      +RR          C P+    K++ SATLTQ+P KL Q
Sbjct: 408 SED-------PADPCAL----LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQ 467

Query: 303 LDLHRPLFLTTG--------------KRRYKLPEKLESYMTICESKLKPLYLVALLQSLG 362
           L LH+P   +TG                +Y  P  L  +   C    KPL ++ L+  +G
Sbjct: 468 LGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMG 527

Query: 363 GEKCIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVS 422
             + + FT+S E++HRL  L+  F    +++ E+S       R   L  F  G++Q+L+S
Sbjct: 528 FSRVLCFTNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLIS 587

Query: 423 SDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLL 482
           +DA  RG+DV+GV  V+NYD P +++TY+HR GRTARAG++G+ FTLL K + RRF ++L
Sbjct: 588 TDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRML 647

Query: 483 QKADNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRKS 497
            +A       H L S  ++ L P Y  AL +L+E V+ ER +++
Sbjct: 648 TEAGAPELQRHELSSKLLQPLVPRYEEALSQLEESVKEERKQRA 665

[Close]

BLAST of Csor.00g116360 vs. ExPASy Swiss-Prot
Match: Q6P9R1 (ATP-dependent RNA helicase DDX51 OS=Mus musculus OX=10090 GN=Ddx51 PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-78
Identity = 190/517 (36.75%), Postives = 282/517 (54.55%), Query Frame = 0


Query: 11  PVLP-WMRSP--VDVSLFEE-CPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE---- 70
           P LP W+  P  V  S+ E+  P+E +P + P L+  L+  GI+S FPVQ AV       
Sbjct: 148 PFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPALLES 207

Query: 71  -----AIGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLAL 130
                 IG G ++  DLC+++PTGSGKTLA+ +P+VQ L  R V  +RALVVLPT++LA 
Sbjct: 208 ADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKELAQ 267

Query: 131 QVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDI 190
           QV +VF        L V L  GQ S+A E   L+++              +   +   DI
Sbjct: 268 QVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQKT-------------ADGFRCLADI 327

Query: 191 LVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFP 250
           +VATPGRL+DHI+ T GF+LQ LR+L+IDE DR++   +QSWLP V+             
Sbjct: 328 VVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAF--------- 387

Query: 251 SYTSLPCSAGSLKTKRRFGIERGFKGACYPR--FSKMVLSATLTQDPGKLAQLDLHRPLF 310
            Y+  P  + +L  +R           C P+    K++ SATLTQDP KL +L L++P  
Sbjct: 388 -YSEGPTGSCAL-LQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRL 447

Query: 311 LTT---------------GKRRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVF 370
            +T                  +Y  P  L  +   C    KPL ++ L+  +   + + F
Sbjct: 448 FSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCF 507

Query: 371 TSSVESTHRLCTLLNFFDDLQLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRG 430
           T+S E++HRL  L   F    + + E+S       R K L  F  G++Q+L+S+DA  RG
Sbjct: 508 TNSRENSHRLYLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARG 567

Query: 431 MDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDS 490
           +DV+GV  VINYD P +++TY+HR GRTARAG++G+ FTLL K + R+F +++ +A    
Sbjct: 568 IDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPE 627

Query: 491 CPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRKS 497
              H +P   ++ L   Y +AL +L++ V+ E+  K+
Sbjct: 628 LTHHEIPRKLLQPLVARYETALSQLEKTVKEEQKLKA 638

[Close]

BLAST of Csor.00g116360 vs. ExPASy Swiss-Prot
Match: Q6DRI7 (ATP-dependent RNA helicase DDX51 OS=Danio rerio OX=7955 GN=ddx51 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.7e-78
Identity = 192/520 (36.92%), Postives = 272/520 (52.31%), Query Frame = 0


Query: 3   EKQKRKSIPVLP-WMRSPVDVS---LFEECPLEILPSLDPRLKAALQNMGISSLFPVQLA 62
           EK  +K   VLP W+  P  +         P+  +P + P L   LQ  GI S FPVQ  
Sbjct: 159 EKDVQKVKRVLPQWLSQPDVIQKDIKSNLIPISEVPGICPTLLRKLQTNGIQSFFPVQAE 218

Query: 63  VWQE---------AIGPGSFE-RDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVV 122
           V             +GPG +  RD+C+++PTGSGKTLA+ +P+VQ LS R V+ +RAL V
Sbjct: 219 VIPAILESVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRALAV 278

Query: 123 LPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSV 182
           LPT++LA QV  VF+A      L V +  GQ S A E   L    ++  G+ +       
Sbjct: 279 LPTKELAQQVSNVFSAYTEGSSLKVVMITGQKSFAAEQTAL---SEIRGGVSH------- 338

Query: 183 QLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQL--- 242
              S  DI+VATPGRL+DHIN    F+LQHLR+L+IDE DR++   +QSWL  V +    
Sbjct: 339 ---SMADIVVATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYS 398

Query: 243 THVDDENIIFPSYTSLPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLA 302
           T  +    +F      P +A SL   +                 K++ SATLTQ+P KL 
Sbjct: 399 TPGETHTSVFRRTVPGPITAASLSPPQ-------------IPLQKLLFSATLTQNPEKLQ 458

Query: 303 QLDLHRP-LFLTT---------GKRRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEK 362
            LDLH+P LF +T          +  +  P+ L  Y   C    KPL ++  L  L    
Sbjct: 459 LLDLHQPRLFSSTHSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSP 518

Query: 363 CIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDA 422
            + FT+S E  HRL  L+  F    +E+ E+S       R KTL  F  G++ +L+S+DA
Sbjct: 519 ALCFTNSREGAHRLYLLVKLFGG--VEVAEFSSKLSPGERQKTLKDFEKGKIPLLISTDA 578

Query: 423 MTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKA 482
             RG+D+ GV+ VINYD P +I+TYIHR GRTARAG++G  FT L K + +RF K++  A
Sbjct: 579 AARGIDINGVKCVINYDAPQYIRTYIHRVGRTARAGKAGLAFTFLLKVQEKRFLKMVSDA 638

Query: 483 DNDSCPVHSLPSSSIELLQPTYVSALEKLKEKVESERSRK 496
            +       +   +++ ++  Y   L +L   V+ E  +K
Sbjct: 639 GSPGIQKQHVHPEALKSMESRYEQVLAELGTIVKEENEKK 650

[Close]

BLAST of Csor.00g116360 vs. NCBI nr
Match: KAG6594446.1 (DEAD-box ATP-dependent RNA helicase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 999 bits (2582), Expect = 0.0
Identity = 516/516 (100.00%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR
Sbjct: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516
           LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS
Sbjct: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516

[Close]

BLAST of Csor.00g116360 vs. NCBI nr
Match: KAG7026449.1 (DEAD-box ATP-dependent RNA helicase 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 993 bits (2567), Expect = 0.0
Identity = 515/516 (99.81%), Postives = 515/516 (99.81%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPR-LKAALQNMGISSLFPVQLAV 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPR LKAALQNMGISSLFPVQLAV
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRQLKAALQNMGISSLFPVQLAV 60

Query: 61  WQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVK 120
           WQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVK
Sbjct: 61  WQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVK 120

Query: 121 EVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVA 180
           EVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVA
Sbjct: 121 EVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVA 180

Query: 181 TPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYT 240
           TPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYT
Sbjct: 181 TPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYT 240

Query: 241 SLPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGK 300
           SLPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGK
Sbjct: 241 SLPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGK 300

Query: 301 RRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDL 360
           RRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDL
Sbjct: 301 RRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDL 360

Query: 361 QLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKT 420
           QLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKT
Sbjct: 361 QLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKT 420

Query: 421 YIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVS 480
           YIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVS
Sbjct: 421 YIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVS 480

Query: 481 ALEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEK 515
           ALEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEK
Sbjct: 481 ALEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEK 516

[Close]

BLAST of Csor.00g116360 vs. NCBI nr
Match: XP_022926614.1 (DEAD-box ATP-dependent RNA helicase 1 [Cucurbita moschata] >XP_022926615.1 DEAD-box ATP-dependent RNA helicase 1 [Cucurbita moschata])

HSP 1 Score: 992 bits (2565), Expect = 0.0
Identity = 513/516 (99.42%), Postives = 514/516 (99.61%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAGSLKT RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR
Sbjct: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L+IKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLL KDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516
           LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS
Sbjct: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516

[Close]

BLAST of Csor.00g116360 vs. NCBI nr
Match: XP_023517664.1 (DEAD-box ATP-dependent RNA helicase 1 [Cucurbita pepo subsp. pepo] >XP_023517665.1 DEAD-box ATP-dependent RNA helicase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 991 bits (2563), Expect = 0.0
Identity = 512/516 (99.22%), Postives = 514/516 (99.61%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDF VQLQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFLVQLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAGSLKT RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR
Sbjct: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L+IKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516
           LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS
Sbjct: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516

[Close]

BLAST of Csor.00g116360 vs. NCBI nr
Match: XP_023003461.1 (DEAD-box ATP-dependent RNA helicase 1 [Cucurbita maxima])

HSP 1 Score: 978 bits (2527), Expect = 0.0
Identity = 508/516 (98.45%), Postives = 510/516 (98.84%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHL YLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLCYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAG LKT RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR
Sbjct: 241 LPCSAGFLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L+IKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLLSKD VRRFKKLLQKADNDSCP HSLPSSSIELLQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLSKDGVRRFKKLLQKADNDSCPEHSLPSSSIELLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516
           LEKLKEKVESERSRKSTIMSSRVGKRKDTNS NEKS
Sbjct: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNS-NEKS 515

[Close]

BLAST of Csor.00g116360 vs. ExPASy TrEMBL
Match: A0A6J1EFN8 (DEAD-box ATP-dependent RNA helicase 1 OS=Cucurbita moschata OX=3662 GN=LOC111433692 PE=4 SV=1)

HSP 1 Score: 992 bits (2565), Expect = 0.0
Identity = 513/516 (99.42%), Postives = 514/516 (99.61%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAGSLKT RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR
Sbjct: 241 LPCSAGSLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L+IKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLL KDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLCKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516
           LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS
Sbjct: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516

[Close]

BLAST of Csor.00g116360 vs. ExPASy TrEMBL
Match: A0A6J1KPB8 (DEAD-box ATP-dependent RNA helicase 1 OS=Cucurbita maxima OX=3661 GN=LOC111497067 PE=4 SV=1)

HSP 1 Score: 978 bits (2527), Expect = 0.0
Identity = 508/516 (98.45%), Postives = 510/516 (98.84%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW
Sbjct: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT
Sbjct: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHL YLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLCYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAG LKT RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR
Sbjct: 241 LPCSAGFLKTIRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L+IKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLLSKD VRRFKKLLQKADNDSCP HSLPSSSIELLQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLSKDGVRRFKKLLQKADNDSCPEHSLPSSSIELLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 516
           LEKLKEKVESERSRKSTIMSSRVGKRKDTNS NEKS
Sbjct: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNS-NEKS 515

[Close]

BLAST of Csor.00g116360 vs. ExPASy TrEMBL
Match: A0A6J1CZ56 (DEAD-box ATP-dependent RNA helicase 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015817 PE=4 SV=1)

HSP 1 Score: 924 bits (2388), Expect = 0.0
Identity = 478/515 (92.82%), Postives = 489/515 (94.95%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M EKQKRKSIPVLPWMRSPVDVSLFEECPLEILP LDPRLK ALQ  GI+S+FPVQLAVW
Sbjct: 1   MGEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPLLDPRLKVALQKTGIASIFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
            E IGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR VKCLRALVVLPTRDLALQVKE
Sbjct: 61  LEVIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRAVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VF AIAPAVGLSVGLAVGQSSIADEI+GLIKRPK EAGICYDPEDFSV LQSSVDILVAT
Sbjct: 121 VFTAIAPAVGLSVGLAVGQSSIADEISGLIKRPKFEAGICYDPEDFSVPLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLT  DD+NIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTRADDDNIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAGSLKT RRFG+ERGFKG  YPR +KMVLSATLTQDP KL+QLDLH PLFLTTGKR
Sbjct: 241 LPCSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPSKLSQLDLHHPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYM ICESKLKPLYLV+LLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMMICESKLKPLYLVSLLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L IKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LNIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD DSCPVHSLPSSSIELL PTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADKDSCPVHSLPSSSIELLHPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEK 515
           LEKLKEKVESE S KST+MSSRVGKRK+TNS NEK
Sbjct: 481 LEKLKEKVESETSIKSTVMSSRVGKRKETNS-NEK 514

[Close]

BLAST of Csor.00g116360 vs. ExPASy TrEMBL
Match: A0A6J1D077 (DEAD-box ATP-dependent RNA helicase 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015817 PE=4 SV=1)

HSP 1 Score: 924 bits (2388), Expect = 0.0
Identity = 478/515 (92.82%), Postives = 489/515 (94.95%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M EKQKRKSIPVLPWMRSPVDVSLFEECPLEILP LDPRLK ALQ  GI+S+FPVQLAVW
Sbjct: 1   MGEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPLLDPRLKVALQKTGIASIFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
            E IGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSR VKCLRALVVLPTRDLALQVKE
Sbjct: 61  LEVIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRAVKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VF AIAPAVGLSVGLAVGQSSIADEI+GLIKRPK EAGICYDPEDFSV LQSSVDILVAT
Sbjct: 121 VFTAIAPAVGLSVGLAVGQSSIADEISGLIKRPKFEAGICYDPEDFSVPLQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLT  DD+NIIFPSYTS
Sbjct: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTRADDDNIIFPSYTS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
           LPCSAGSLKT RRFG+ERGFKG  YPR +KMVLSATLTQDP KL+QLDLH PLFLTTGKR
Sbjct: 241 LPCSAGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPSKLSQLDLHHPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYM ICESKLKPLYLV+LLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ
Sbjct: 301 RYKLPEKLESYMMICESKLKPLYLVSLLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L IKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY
Sbjct: 361 LNIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKAD DSCPVHSLPSSSIELL PTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADKDSCPVHSLPSSSIELLHPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEK 515
           LEKLKEKVESE S KST+MSSRVGKRK+TNS NEK
Sbjct: 481 LEKLKEKVESETSIKSTVMSSRVGKRKETNS-NEK 514

[Close]

BLAST of Csor.00g116360 vs. ExPASy TrEMBL
Match: A0A1S3AZ50 (DEAD-box ATP-dependent RNA helicase 1 OS=Cucumis melo OX=3656 GN=LOC103484346 PE=4 SV=1)

HSP 1 Score: 908 bits (2346), Expect = 0.0
Identity = 470/517 (90.91%), Postives = 487/517 (94.20%), Query Frame = 0


Query: 1   MVEKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVW 60
           M EKQKRK IPVLPWMRSPVDVSL EECPLEILP LD RLK ALQNMGISSLFPVQLAVW
Sbjct: 1   MAEKQKRKHIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKVALQNMGISSLFPVQLAVW 60

Query: 61  QEAIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKE 120
           QEAIGPGSF+RDLCINSPTGSGKTLAYALPIVQMLSSRT+KCLRALVVLPTRDLALQVKE
Sbjct: 61  QEAIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTIKCLRALVVLPTRDLALQVKE 120

Query: 121 VFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVAT 180
           VF+AIAPAVGLSVGLAVGQSSIADEI+ LIKRPKLEAGICYDPED  V LQSSVDILVAT
Sbjct: 121 VFSAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLVALQSSVDILVAT 180

Query: 181 PGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS 240
           PGRLMDHINFTKGFTL+HLRYLVIDETDRLLRE+YQSWLPTVLQLTH DD +IIFPSY S
Sbjct: 181 PGRLMDHINFTKGFTLKHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYIS 240

Query: 241 LPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKR 300
            PCSAGSLKT RRFG+ERGFKG  YPR +KM+LSATLTQDPGKLAQLDLH PLFLTTGKR
Sbjct: 241 NPCSAGSLKTIRRFGVERGFKGKPYPRLAKMILSATLTQDPGKLAQLDLHHPLFLTTGKR 300

Query: 301 RYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQ 360
           RYKLPEKLESYM ICESKLKPLYLVALLQSLG EKCIVFTSSVESTHRLC+LLNFF+DL+
Sbjct: 301 RYKLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLE 360

Query: 361 LEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTY 420
           L+IKEYSGLQRQSLRSKTLNAFRGGE+QVLVSSDAMTRGMDVEGV+NVINYDMPAFIKTY
Sbjct: 361 LKIKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTY 420

Query: 421 IHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSA 480
           IHRAGRTARAGQSGRCFTLL KDEV+RFKKLLQKADNDSCPVHSLPSSSIE LQPTYVSA
Sbjct: 421 IHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHSLPSSSIEFLQPTYVSA 480

Query: 481 LEKLKEKVESERSRKSTIM-SSRVGKRKDTNSSNEKS 516
           LEKLKEKVESE SRKSTI  SSR GKRKD NSS  KS
Sbjct: 481 LEKLKEKVESETSRKSTITYSSRAGKRKDRNSSKAKS 517

[Close]

BLAST of Csor.00g116360 vs. TAIR 10
Match: AT4G15850.1 (RNA helicase 1 )

HSP 1 Score: 698.7 bits (1802), Expect = 3.4e-201
Identity = 352/494 (71.26%), Postives = 414/494 (83.81%), Query Frame = 0


Query: 3   EKQKRKSIPVLPWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQE 62
           ++ K +   V+PWMR+PVDVS  E C L+ LP L+P+LK AL+NMGISSLFPVQ+AVW E
Sbjct: 5   KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64

Query: 63  AIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
            IGPG FERD+C+NSPTGSGKTL+YALPIVQ+L+SR V+CLRALVVLPTRDLALQVK+VF
Sbjct: 65  TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124

Query: 123 AAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPG 182
            AIAPAVGLSVG AVGQSSIA EI+ LIK PKL+AGICYDP+D S  L+S+VDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184

Query: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTS-L 242
           RLMDHIN TKGFTL+HLRYLV+DETDRLLRE+YQSWLPTVLQLT   D++ +FPS+T  +
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDS-LFPSFTPFV 244

Query: 243 PCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRR 302
           P + GSL+T RR  +ERGFKG  YPR  KMVLSATLTQDP KL QLDLH PLF+TTG  R
Sbjct: 245 PSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSR 304

Query: 303 YKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQL 362
           Y+LPEKLE    ICE+ +KP+YLVALL+S  GEKCI+FTSSVE+T RLC LLNFF D ++
Sbjct: 305 YRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKI 364

Query: 363 EIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYI 422
           + KEYSG   QSLRSK L AFR G++QVLV+SDA+TRGMDV+GV NVINYDMP F KT+I
Sbjct: 365 KAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFI 424

Query: 423 HRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVSAL 482
           HRAGRTARAGQ+GRCFTLLS  EVRRF KLL+K  +DSCP++ +P +S++ ++ TY  AL
Sbjct: 425 HRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPAL 484

Query: 483 EKLKEKVESERSRK 496
           EKLKE VESE  +K
Sbjct: 485 EKLKELVESEAPKK 497

[Close]

BLAST of Csor.00g116360 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-42
Identity = 134/461 (29.07%), Postives = 213/461 (46.20%), Query Frame = 0


Query: 14  PWMRSPVDVSLFEECPLEILPSLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDL 73
           P+  +   VS   +  +E+  +L   L  A + +G     P+Q A    A+      RDL
Sbjct: 154 PFFSTVDGVSFHADTFMEL--NLSRPLLRACETLGYKKPTPIQAACIPLAL----TGRDL 213

Query: 74  CINSPTGSGKTLAYALPIVQMLSSR--TVKCLRALVVLPTRDLALQVKEVFAAIAPAVGL 133
           C ++ TGSGKT A+ALP ++ L  R   V   R L++ PTR+LA+Q+  +   +A    +
Sbjct: 214 CASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDI 273

Query: 134 SVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFT 193
             GL VG  S+ ++                      V L+S  DI+VATPGR++DH+  +
Sbjct: 274 KCGLIVGGLSVREQ---------------------EVVLRSMPDIVVATPGRMIDHLRNS 333

Query: 194 KGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTK 253
               L  L  L++DE DRLL+  + + +  +++L                          
Sbjct: 334 MSVDLDDLAVLILDEADRLLQTGFATEITELVRL-------------------------- 393

Query: 254 RRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGKRRYKLPEKLESY 313
                       C  R   M+ SAT+T++  +L +L L++PL L+      + P   E  
Sbjct: 394 ------------CPKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEV 453

Query: 314 MTICESK--LKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGL 373
           + I  ++   +   L++L       K I+F+ + ++ HRL  L   F    L+  E  G 
Sbjct: 454 VRIRRTREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKIL---FGLAGLKAAELHGN 513

Query: 374 QRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTAR 433
             Q+ R  +L  FR  EV  L+++D   RG+D+ GV+ VINY  P  I +Y+HR GRTAR
Sbjct: 514 LTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTAR 545

Query: 434 AGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSI 471
           AG+ G   T ++ D  R   K++ K          +P  SI
Sbjct: 574 AGREGYAVTFVT-DSDRSLLKVIAKKVGSKLKSRVIPEQSI 545

[Close]

BLAST of Csor.00g116360 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 164.1 bits (414), Expect = 3.0e-40
Identity = 136/457 (29.76%), Postives = 209/457 (45.73%), Query Frame = 0


Query: 71  RDLCINSPTGSGKTLAYALPIVQML-----------SSRTVKCLRALVVLPTRDLALQVK 130
           +D+   + TGSGKT A+A+PI+Q L             R      A V+ PTR+LA+Q+ 
Sbjct: 47  KDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA 106

Query: 131 EVFAAIAPAVGLSVGLAVGQSSIADEIAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVA 190
           E F A+   + L   + VG      +   L KRP                      ++VA
Sbjct: 107 EQFEALGADISLRCAVLVGGIDRMQQTIALGKRP---------------------HVIVA 166

Query: 191 TPGRLMDHINFTKGFTLQHLRYLVIDETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYT 250
           TPGRL DH++ TKGF+L+ L+YLV+DE DRLL E ++  L  +L+   ++ +  +F    
Sbjct: 167 TPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLF---- 226

Query: 251 SLPCSAGSLKTKRRFGIERGFKGACYPRFSKMVLSATLTQDPGKLAQLDLHRPLFLTTGK 310
                                             SAT+T+   KL +  L  P+ +    
Sbjct: 227 ----------------------------------SATMTKKVRKLQRACLRNPVKIEAAS 286

Query: 311 RRYKLPEKLESYMTICESKLKPLYLVALLQSLGGEKCIVFTSSVESTHRLCTLLNFFDDL 370
            +Y   + L+       +K K  YLV +L  +     ++FT + + T  L  +L     L
Sbjct: 287 -KYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLR---SL 346

Query: 371 QLEIKEYSGLQRQSLRSKTLNAFRGGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKT 430
                  SG   QS R   LN F+ GE  +LV +D  +RG+D+  V  VINYD+P   K 
Sbjct: 347 GFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKD 406

Query: 431 YIHRAGRTARAGQSGRCFTLLSKDEVRRFKKLLQKADNDSCPVHSLPSSSIELLQPTYVS 490
           YIHR GRTARAG+SG   +L+++ E+  + + ++K      P +  P+   E+L     S
Sbjct: 407 YIHRVGRTARAGRSGVGISLVNQYELEWYIQ-IEKLIGKKLPEY--PAEEDEVL-----S 427

Query: 491 ALEKLKEKVESERSRKSTIMSSRVGKRKDTNSSNEKS 517
            LE++     +E  + S +     G RK     +E+S
Sbjct: 467 LLERV-----AEAKKLSAMNMKESGGRKRRGEDDEES 427

[Close]

BLAST of Csor.00g116360 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 146.7 bits (369), Expect = 5.0e-35
Identity = 126/428 (29.44%), Postives = 199/428 (46.50%), Query Frame = 0


Query: 35  SLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQM 94
           SL  RL+ +L+  GI+ LFP+Q AV    + P    RD+   + TG+GKTLA+ +PI++ 
Sbjct: 108 SLPQRLEESLEKRGITHLFPIQRAV----LVPALQGRDIIARAKTGTGKTLAFGIPIIKR 167

Query: 95  LSS---------RTVKCLRALVVLPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADE 154
           L+          R+ +  + LV+ PTR+LA QV++     AP   LS     G       
Sbjct: 168 LTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPY--LSTVCVYG------- 227

Query: 155 IAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVID 214
                       G+ Y  +  +  L   VD++V TPGR++D I   +   L  + YLV+D
Sbjct: 228 ------------GVSYTIQQSA--LTRGVDVVVGTPGRIIDLIE-GRSLKLGEVEYLVLD 287

Query: 215 ETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTKRRFGIERGFKGACY 274
           E D++L   ++  + ++L+                      +L TKR+            
Sbjct: 288 EADQMLAVGFEEAVESILE----------------------NLPTKRQ------------ 347

Query: 275 PRFSKMVLSATLTQDPGKLAQLDLHRPLFL-TTGKRRYKLPEKLESYMTICESKLKPLYL 334
                M+ SAT+     KLA+  L  PL +   G +  KL E ++ Y     S  K   L
Sbjct: 348 ----SMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTIL 407

Query: 335 VALLQSLG-GEKCIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGLQRQSLRSKTLNAFR 394
             L+     G K IVFT +      +   L+      +  +   G   Q  R +TLNAFR
Sbjct: 408 SDLITVYAKGGKTIVFTQTKRDADEVSLALS----NSIATEALHGDISQHQRERTLNAFR 465

Query: 395 GGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKD 452
            G+  VLV++D  +RG+D+  V  VI+Y++P   +T++HR+GRT RAG+ G    + +  
Sbjct: 468 QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSS 465

[Close]

BLAST of Csor.00g116360 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 146.7 bits (369), Expect = 5.0e-35
Identity = 126/428 (29.44%), Postives = 199/428 (46.50%), Query Frame = 0


Query: 35  SLDPRLKAALQNMGISSLFPVQLAVWQEAIGPGSFERDLCINSPTGSGKTLAYALPIVQM 94
           SL  RL+ +L+  GI+ LFP+Q AV    + P    RD+   + TG+GKTLA+ +PI++ 
Sbjct: 108 SLPQRLEESLEKRGITHLFPIQRAV----LVPALQGRDIIARAKTGTGKTLAFGIPIIKR 167

Query: 95  LSS---------RTVKCLRALVVLPTRDLALQVKEVFAAIAPAVGLSVGLAVGQSSIADE 154
           L+          R+ +  + LV+ PTR+LA QV++     AP   LS     G       
Sbjct: 168 LTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPY--LSTVCVYG------- 227

Query: 155 IAGLIKRPKLEAGICYDPEDFSVQLQSSVDILVATPGRLMDHINFTKGFTLQHLRYLVID 214
                       G+ Y  +  +  L   VD++V TPGR++D I   +   L  + YLV+D
Sbjct: 228 ------------GVSYTIQQSA--LTRGVDVVVGTPGRIIDLIE-GRSLKLGEVEYLVLD 287

Query: 215 ETDRLLRESYQSWLPTVLQLTHVDDENIIFPSYTSLPCSAGSLKTKRRFGIERGFKGACY 274
           E D++L   ++  + ++L+                      +L TKR+            
Sbjct: 288 EADQMLAVGFEEAVESILE----------------------NLPTKRQ------------ 347

Query: 275 PRFSKMVLSATLTQDPGKLAQLDLHRPLFL-TTGKRRYKLPEKLESYMTICESKLKPLYL 334
                M+ SAT+     KLA+  L  PL +   G +  KL E ++ Y     S  K   L
Sbjct: 348 ----SMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTIL 407

Query: 335 VALLQSLG-GEKCIVFTSSVESTHRLCTLLNFFDDLQLEIKEYSGLQRQSLRSKTLNAFR 394
             L+     G K IVFT +      +   L+      +  +   G   Q  R +TLNAFR
Sbjct: 408 SDLITVYAKGGKTIVFTQTKRDADEVSLALS----NSIATEALHGDISQHQRERTLNAFR 465

Query: 395 GGEVQVLVSSDAMTRGMDVEGVRNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLSKD 452
            G+  VLV++D  +RG+D+  V  VI+Y++P   +T++HR+GRT RAG+ G    + +  
Sbjct: 468 QGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSS 465

The following BLAST results are available for this feature:

BLAST of Csor.00g116360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7FGZ2	4.8e-200	71.26	DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana OX=3702 GN=RH1 PE=...	[more]
Q0DWT8	1.1e-177	62.75	DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8N8A6	7.4e-84	37.79	ATP-dependent RNA helicase DDX51 OS=Homo sapiens OX=9606 GN=DDX51 PE=1 SV=3	[more]
Q6P9R1	2.1e-78	36.75	ATP-dependent RNA helicase DDX51 OS=Mus musculus OX=10090 GN=Ddx51 PE=1 SV=1	[more]
Q6DRI7	2.7e-78	36.92	ATP-dependent RNA helicase DDX51 OS=Danio rerio OX=7955 GN=ddx51 PE=2 SV=1	[more]

BLAST of Csor.00g116360 vs. NCBI nr


Match Name	Identity	Description
KAG6594446.1	100.00	DEAD-box ATP-dependent RNA helicase 1, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7026449.1	99.81	DEAD-box ATP-dependent RNA helicase 1 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022926614.1	99.42	DEAD-box ATP-dependent RNA helicase 1 [Cucurbita moschata] >XP_022926615.1 DEAD-...	[more]
XP_023517664.1	99.22	DEAD-box ATP-dependent RNA helicase 1 [Cucurbita pepo subsp. pepo] >XP_023517665...	[more]
XP_023003461.1	98.45	DEAD-box ATP-dependent RNA helicase 1 [Cucurbita maxima]	[more]

BLAST of Csor.00g116360 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EFN8	99.42	DEAD-box ATP-dependent RNA helicase 1 OS=Cucurbita moschata OX=3662 GN=LOC111433...	[more]
A0A6J1KPB8	98.45	DEAD-box ATP-dependent RNA helicase 1 OS=Cucurbita maxima OX=3661 GN=LOC11149706...	[more]
A0A6J1CZ56	92.82	DEAD-box ATP-dependent RNA helicase 1 isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1D077	92.82	DEAD-box ATP-dependent RNA helicase 1 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A1S3AZ50	90.91	DEAD-box ATP-dependent RNA helicase 1 OS=Cucumis melo OX=3656 GN=LOC103484346 PE...	[more]

BLAST of Csor.00g116360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15850.1	3.4e-201	71.26	RNA helicase 1	[more]
AT4G16630.1	4.2e-42	29.07	DEA(D/H)-box RNA helicase family protein	[more]
AT5G60990.1	3.0e-40	29.76	DEA(D/H)-box RNA helicase family protein	[more]
AT5G26742.1	5.0e-35	29.44	DEAD box RNA helicase (RH3)	[more]
AT5G26742.2	5.0e-35	29.44	DEAD box RNA helicase (RH3)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 48..311 e-value: 1.0E-32 score: 124.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 64..295 score: 21.700655
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 350..431 e-value: 3.2E-20 score: 83.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 320..431 e-value: 1.5E-22 score: 80.0
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 307..473 score: 19.267693
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 19..299 e-value: 2.9E-57 score: 195.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 305..515 e-value: 6.0E-41 score: 142.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 103..453
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 54..283 e-value: 7.7E-33 score: 113.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..516
None	No IPR available	PANTHER	PTHR24031:SF68	ATP-DEPENDENT RNA HELICASE DDX51	coord: 28..484
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 28..484
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 308..440 e-value: 2.00074E-41 score: 143.032
None	No IPR available	CDD	cd17956	DEADc_DDX51	coord: 40..296 e-value: 5.49883E-98 score: 293.769

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g116360.m01	Csor.00g116360.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding