Csor.00g115270 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g115270
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 987575 .. 987898 (+)
RNA-Seq ExpressionCsor.00g115270
SyntenyCsor.00g115270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTTGTTATGGATGCAGACCCAACATCAGGAAATCTAGTGGGGCATGCAGCAAAGGAGAAGGAGCAATTCGGGTGGGCGATCAGGGTTCTAAGATTGAACTGTAGGATTAGTGTTTTCTTGCTTTATGCCCTTTTTCCATTGAAAAGCAACTCAAAGACAGGGAAAGTGGAGGTGGCAATACTTGCCTTGACAAGCTCGCAACCACCTTGGCCACCAGTCTATGACTTCAAAGCCAAGCATATCTTTGCCGATGTTCATCTTTTAACTAACTCCAAATATAATAAAAGGCTTTGGGAATCCAAAATCCAAGTGGTTTAG

mRNA sequence

ATGGGCTTTGTTATGGATGCAGACCCAACATCAGGAAATCTAGTGGGGCATGCAGCAAAGGAGAAGGAGCAATTCGGGTGGGCGATCAGGGTTCTAAGATTGAACTGTAGGATTAGTGTTTTCTTGCTTTATGCCCTTTTTCCATTGAAAAGCAACTCAAAGACAGGGAAAGTGGAGGTGGCAATACTTGCCTTGACAAGCTCGCAACCACCTTGGCCACCAGTCTATGACTTCAAAGCCAAGCATATCTTTGCCGATGTTCATCTTTTAACTAACTCCAAATATAATAAAAGGCTTTGGGAATCCAAAATCCAAGTGGTTTAG

Coding sequence (CDS)

ATGGGCTTTGTTATGGATGCAGACCCAACATCAGGAAATCTAGTGGGGCATGCAGCAAAGGAGAAGGAGCAATTCGGGTGGGCGATCAGGGTTCTAAGATTGAACTGTAGGATTAGTGTTTTCTTGCTTTATGCCCTTTTTCCATTGAAAAGCAACTCAAAGACAGGGAAAGTGGAGGTGGCAATACTTGCCTTGACAAGCTCGCAACCACCTTGGCCACCAGTCTATGACTTCAAAGCCAAGCATATCTTTGCCGATGTTCATCTTTTAACTAACTCCAAATATAATAAAAGGCTTTGGGAATCCAAAATCCAAGTGGTTTAG

Protein sequence

MGFVMDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSNSKTGKVEVAILALTSSQPPWPPVYDFKAKHIFADVHLLTNSKYNKRLWESKIQVV
Homology
[Close]
BLAST of Csor.00g115270 vs. NCBI nr
Match: KAG6594555.1 (hypothetical protein SDJN03_11108, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220 bits (560), Expect = 2.79e-72
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MGFVMDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSNSKTGKVEV 60
           MGFVMDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSNSKTGKVEV
Sbjct: 1   MGFVMDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSNSKTGKVEV 60

Query: 61  AILALTSSQPPWPPVYDFKAKHIFADVHLLTNSKYNKRLWESKIQVV 107
           AILALTSSQPPWPPVYDFKAKHIFADVHLLTNSKYNKRLWESKIQVV
Sbjct: 61  AILALTSSQPPWPPVYDFKAKHIFADVHLLTNSKYNKRLWESKIQVV 107

[Close]
BLAST of Csor.00g115270 vs. NCBI nr
Match: KAG7032778.1 (hypothetical protein SDJN02_06828, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (427), Expect = 1.02e-51
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 5  MDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSNSKTGKVEVAILA 64
          MDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSN+KTGKVEVAILA
Sbjct: 1  MDADPTSGNLVGHAAKEKEQFGWAIRVLRLNCRISVFLLYALFPLKSNAKTGKVEVAILA 60

Query: 65 LTSSQPPWPPVYDFKAKHIFAD 86
          LTSSQPPWPPVYDFKAKHIFAD
Sbjct: 61 LTSSQPPWPPVYDFKAKHIFAD 82

The following BLAST results are available for this feature:
BLAST of Csor.00g115270 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g115270 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594555.12.79e-72100.00hypothetical protein SDJN03_11108, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7032778.11.02e-5198.78hypothetical protein SDJN02_06828, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g115270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g115270 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g115270.m01Csor.00g115270.m01mRNA