Csor.00g114970 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g114970
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Glycogen phosphorylase 1-like
Location	Csor_Chr07: 1096555 .. 1097019 (+)
RNA-Seq Expression	Csor.00g114970
Synteny	Csor.00g114970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCGCCATGGCCACAAAAGCTTCAAGTCCTGACCCACATTCTGCTCTGCCCCACCACTGCGCCGCCGCTCGCTTCTCAATATTTCGTCGCTACCAAAATCCCCTGTTACCTCAATTGGGATTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGCCCTCCCTAAAACCTCCTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCACTGATTCTCGCTAAAGGCGTCGATCCCGCTCAGTGGGGCGATGAACAGAGGAGAACCTACGTGAGAATGAGGCTCAGAAGAAAGCGTCTGGGTAGCGATGTTCATCCCTTAATCCCAATTATAATTCCCAATATGTTGTTGTTTTCCCTTCTGCTATGGAATCCATTATCTTCCACTGATTGA

mRNA sequence

ATGGAAGAATCGCCATGGCCACAAAAGCTTCAAGTCCTGACCCACATTCTGCTCTGCCCCACCACTGCGCCGCCGCTCGCTTCTCAATATTTCGTCGCTACCAAAATCCCCTGTTACCTCAATTGGGATTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGCCCTCCCTAAAACCTCCTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCACTGATTCTCGCTAAAGGCGTCGATCCCGCTCAGTGGGGCGATGAACAGAGGAGAACCTACGTGAGAATGAGGCTCAGAAGAAAGCGTCTGGGTAGCGATGTTCATCCCTTAATCCCAATTATAATTCCCAATATGTTGTTGTTTTCCCTTCTGCTATGGAATCCATTATCTTCCACTGATTGA

Coding sequence (CDS)

ATGGAAGAATCGCCATGGCCACAAAAGCTTCAAGTCCTGACCCACATTCTGCTCTGCCCCACCACTGCGCCGCCGCTCGCTTCTCAATATTTCGTCGCTACCAAAATCCCCTGTTACCTCAATTGGGATTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGCCCTCCCTAAAACCTCCTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCACTGATTCTCGCTAAAGGCGTCGATCCCGCTCAGTGGGGCGATGAACAGAGGAGAACCTACGTGAGAATGAGGCTCAGAAGAAAGCGTCTGGGTAGCGATGTTCATCCCTTAATCCCAATTATAATTCCCAATATGTTGTTGTTTTCCCTTCTGCTATGGAATCCATTATCTTCCACTGATTGA

Protein sequence

MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSLHLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLRRKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD

Homology

[Close]

BLAST of Csor.00g114970 vs. NCBI nr
Match: KAG6594585.1 (hypothetical protein SDJN03_11138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026555.1 hypothetical protein SDJN02_10557, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328 bits (840), Expect = 1.82e-113
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Csor.00g114970 vs. NCBI nr
Match: XP_022926954.1 (uncharacterized protein LOC111433914 [Cucurbita moschata])

HSP 1 Score: 325 bits (833), Expect = 2.13e-112
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPF SL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Csor.00g114970 vs. NCBI nr
Match: XP_023517994.1 (uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322 bits (825), Expect = 3.53e-111
Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLKRLSRF LPKTSWRSKCPFQHPPP ILAKGV+PAQWGDEQRRTYVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPSILAKGVNPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Csor.00g114970 vs. NCBI nr
Match: XP_004134687.2 (uncharacterized protein LOC101221431 [Cucumis sativus])

HSP 1 Score: 296 bits (758), Expect = 8.54e-101
Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLK+LSRF LPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]

BLAST of Csor.00g114970 vs. NCBI nr
Match: XP_038883097.1 (uncharacterized protein LOC120074151 [Benincasa hispida])

HSP 1 Score: 296 bits (757), Expect = 1.17e-100
Identity = 138/154 (89.61%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQ LTHILLCPTTAPPLASQY +ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 11  MEETPWPQKLQALTHILLCPTTAPPLASQYLIATKIPCYLNWDYPPLLCPKSSIFPFLSL 70

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLKRLSRF LPKTSWRSKCP+Q PPPLILAKGV  AQWGDEQR+ YVRMRLR
Sbjct: 71  HLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKGVHSAQWGDEQRKNYVRMRLR 130

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRL SDVHPLIPI+IPNMLLFSLLLWNP SS+D
Sbjct: 131 RKRLVSDVHPLIPIMIPNMLLFSLLLWNPFSSSD 164

[Close]

BLAST of Csor.00g114970 vs. ExPASy TrEMBL
Match: A0A6J1EGM1 (uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC111433914 PE=4 SV=1)

HSP 1 Score: 325 bits (833), Expect = 1.03e-112
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPF SL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Csor.00g114970 vs. ExPASy TrEMBL
Match: A0A0A0KK88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 4.14e-101
Identity = 137/154 (88.96%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLK+LSRF LPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]

BLAST of Csor.00g114970 vs. ExPASy TrEMBL
Match: A0A5A7UDV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007700 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 3.86e-99
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PW QKLQ LTHILLCP TAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 1   MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLK+LSRF LPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRLR
Sbjct: 61  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 120

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 121 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 154

[Close]

BLAST of Csor.00g114970 vs. ExPASy TrEMBL
Match: A0A1S3B097 (uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 5.64e-99
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PW QKLQ LTHILLCP TAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLK+LSRF LPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR  Y RMRLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154
           RKRLGSDVHPLIPI+IPNMLLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]

BLAST of Csor.00g114970 vs. ExPASy TrEMBL
Match: A0A6J1IR68 (uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 1.34e-94
Identity = 130/153 (84.97%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           ME++PW QKL+ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLC KPSIFPF SL
Sbjct: 9   MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68

Query: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
           HLQWGFSLFLKRLSR  LP TSWRSKCP+Q PPPL+LA+GVD AQW DEQRR YVRMRLR
Sbjct: 69  HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128

Query: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSST 153
           RKRLGSDV+PLIPI+IPNMLLF LLLW PLSST
Sbjct: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 161

[Close]

BLAST of Csor.00g114970 vs. TAIR 10
Match: AT2G33855.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 169.1 bits (427), Expect = 2.8e-42
Identity = 80/151 (52.98%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+ W Q++Q +THIL  PTT P L SQ+F+   IP Y++WDYPP+  P          
Sbjct: 1   MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSP---------T 60

Query: 61  HL-QWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRL 120
           HL QW  S F KR+SRF LP TSWRS  P+  PP  ++A GV+  +WG E+RR Y R RL
Sbjct: 61  HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 120

Query: 121 RRKRLGSDVHPLIPIIIPNMLLFSLLLWNPL 151
           RRKRL ++V+P IP+++PN+LLF+LLLW+PL
Sbjct: 121 RRKRLVNEVNPYIPLLVPNLLLFTLLLWDPL 142

The following BLAST results are available for this feature:

BLAST of Csor.00g114970 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g114970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594585.1	1.82e-113	100.00	hypothetical protein SDJN03_11138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022926954.1	2.13e-112	99.35	uncharacterized protein LOC111433914 [Cucurbita moschata]	[more]
XP_023517994.1	3.53e-111	98.05	uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo]	[more]
XP_004134687.2	8.54e-101	88.96	uncharacterized protein LOC101221431 [Cucumis sativus]	[more]
XP_038883097.1	1.17e-100	89.61	uncharacterized protein LOC120074151 [Benincasa hispida]	[more]

BLAST of Csor.00g114970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGM1	1.03e-112	99.35	uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A0A0KK88	4.14e-101	88.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1	[more]
A0A5A7UDV0	3.86e-99	87.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B097	5.64e-99	87.66	uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=...	[more]
A0A6J1IR68	1.34e-94	84.97	uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635...	[more]

BLAST of Csor.00g114970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33855.1	2.8e-42	52.98	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38364	OSJNBA0022H21.9 PROTEIN	coord: 3..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g114970.m01	Csor.00g114970.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane