
Csor.00g114900 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCCGGACCTCAGCCTGACCGCGGCCTCGGCAAGCTCAGGAAGATCAAGCCCTTGGTCGTTAAAGGTAACCCTTTTTGTTCATTTTCTTTTTCTTTTGAATCTTGTTGATTGTTTTCGTTTAGTATAAATTCTTGTTGATTATTGTCACTTTTACTAGTAGTTGGCTGCTTGTTTTTACGATTTACATCAACTTGTAACTATGATGTTTTCGGGATGGGTTTAGATTTGGATGGTGAGGGAAGCAAATACCAGAGCCAGATGTCGCCGGCTACACCGGTGACACCTACAACGCCGTTTACGGCGGCGCGTAAGGATAATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCCACTAAGACTATTGGTGCTGAAGTCTTCGACAAGCCTCAACCCAACTCTCCGACTGTTTACGACTGGTGTGTACCGCCACTTTCCAACCTTTTAATTGGAGCATATGTATAATCCTCGCGCCGATCTAACTGAAAAATACCTTTAAAAAAAAAAAAAAAAAATATCTAGTAATGAAGAAATGAAATCGAAATCTGGGGGCATCTCGTCCTCCATATTCCCAACAGTTGATGGGGGATAAAAAGATTCCAAATTTTGATTCTTTGATATTCCGGAGTGAGATGATCTAAGCCGTTAGTTCGGTGGACCTTCATCATGGTCCGGACATCTTGGGGCTTGATTGGCTCTCTATTTTTGTCCACATCGATCAAAACTGATACTGTTACTTTGTGATTACAGGCTCTACAGCGGTGATACCAGAAGCGAGCATCGCTAA ATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCCGGACCTCAGCCTGACCGCGGCCTCGGCAAGCTCAGGAAGATCAAGCCCTTGGTCGTTAAAGATTTGGATGGTGAGGGAAGCAAATACCAGAGCCAGATGTCGCCGGCTACACCGGTGACACCTACAACGCCGTTTACGGCGGCGCGTAAGGATAATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCCACTAAGACTATTGGTGCTGAAGTCTTCGACAAGCCTCAACCCAACTCTCCGACTGTTTACGACTGGCTCTACAGCGGTGATACCAGAAGCGAGCATCGCTAA ATGGTTCTGCTTGAGAAGCTTTGGGATGATGTTGTGGCCGGACCTCAGCCTGACCGCGGCCTCGGCAAGCTCAGGAAGATCAAGCCCTTGGTCGTTAAAGATTTGGATGGTGAGGGAAGCAAATACCAGAGCCAGATGTCGCCGGCTACACCGGTGACACCTACAACGCCGTTTACGGCGGCGCGTAAGGATAATGTTTGGAGGAGCGTCTTCAACCCTGGTAGAAACTTTGCCACTAAGACTATTGGTGCTGAAGTCTTCGACAAGCCTCAACCCAACTCTCCGACTGTTTACGACTGGCTCTACAGCGGTGATACCAGAAGCGAGCATCGCTAA MVLLEKLWDDVVAGPQPDRGLGKLRKIKPLVVKDLDGEGSKYQSQMSPATPVTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTRSEHR Homology
BLAST of Csor.00g114900 vs. ExPASy Swiss-Prot
Match: Q05349 (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.6e-39 Identity = 77/111 (69.37%), Postives = 94/111 (84.68%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy Swiss-Prot
Match: O22611 (Dormancy-associated protein 1 OS=Pisum sativum OX=3888 GN=DRM1 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy Swiss-Prot
Match: B9DGG8 (Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 3.2e-32 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy Swiss-Prot
Match: P93017 (Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DRMH1 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.0e-28 Identity = 64/110 (58.18%), Postives = 83/110 (75.45%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy Swiss-Prot
Match: Q9FKV8 (Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=DRMH2 PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.7e-25 Identity = 64/115 (55.65%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of Csor.00g114900 vs. NCBI nr
Match: XP_023517424.1 (auxin-repressed 12.5 kDa protein-like [Cucurbita pepo subsp. pepo] >KAG6594592.1 hypothetical protein SDJN03_11145, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026563.1 hypothetical protein SDJN02_10565, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 234 bits (596), Expect = 1.21e-77 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Csor.00g114900 vs. NCBI nr
Match: XP_022926484.1 (auxin-repressed 12.5 kDa protein-like [Cucurbita moschata]) HSP 1 Score: 232 bits (591), Expect = 6.99e-77 Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Csor.00g114900 vs. NCBI nr
Match: XP_023004049.1 (auxin-repressed 12.5 kDa protein-like [Cucurbita maxima]) HSP 1 Score: 229 bits (584), Expect = 8.18e-76 Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of Csor.00g114900 vs. NCBI nr
Match: XP_038881719.1 (dormancy-associated protein 1-like [Benincasa hispida]) HSP 1 Score: 211 bits (538), Expect = 1.14e-68 Identity = 104/120 (86.67%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Csor.00g114900 vs. NCBI nr
Match: XP_008439831.1 (PREDICTED: dormancy-associated protein 1-like [Cucumis melo] >KAA0052673.1 dormancy-associated protein 1-like [Cucumis melo var. makuwa] >TYK13151.1 dormancy-associated protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 206 bits (524), Expect = 1.56e-66 Identity = 101/120 (84.17%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy TrEMBL
Match: A0A6J1EF86 (auxin-repressed 12.5 kDa protein-like OS=Cucurbita moschata OX=3662 GN=LOC111433617 PE=3 SV=1) HSP 1 Score: 232 bits (591), Expect = 3.39e-77 Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy TrEMBL
Match: A0A6J1KV34 (auxin-repressed 12.5 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111497472 PE=3 SV=1) HSP 1 Score: 229 bits (584), Expect = 3.96e-76 Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy TrEMBL
Match: A0A5D3CMW2 (Dormancy-associated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007620 PE=3 SV=1) HSP 1 Score: 206 bits (524), Expect = 7.55e-67 Identity = 101/120 (84.17%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy TrEMBL
Match: A0A1S3B0B2 (dormancy-associated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484508 PE=3 SV=1) HSP 1 Score: 206 bits (524), Expect = 7.55e-67 Identity = 101/120 (84.17%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Csor.00g114900 vs. ExPASy TrEMBL
Match: D1MWZ6 (Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitAuR PE=2 SV=1) HSP 1 Score: 206 bits (523), Expect = 1.07e-66 Identity = 100/120 (83.33%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Csor.00g114900 vs. TAIR 10
Match: AT1G28330.1 (dormancy-associated protein-like 1 ) HSP 1 Score: 159.5 bits (402), Expect = 1.6e-39 Identity = 81/124 (65.32%), Postives = 96/124 (77.42%), Query Frame = 0
BLAST of Csor.00g114900 vs. TAIR 10
Match: AT1G28330.4 (dormancy-associated protein-like 1 ) HSP 1 Score: 157.9 bits (398), Expect = 4.7e-39 Identity = 80/124 (64.52%), Postives = 96/124 (77.42%), Query Frame = 0
BLAST of Csor.00g114900 vs. TAIR 10
Match: AT1G28330.3 (dormancy-associated protein-like 1 ) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-33 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Csor.00g114900 vs. TAIR 10
Match: AT1G28330.2 (dormancy-associated protein-like 1 ) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-33 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Csor.00g114900 vs. TAIR 10
Match: AT1G28330.5 (dormancy-associated protein-like 1 ) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-33 Identity = 74/123 (60.16%), Postives = 89/123 (72.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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