Csor.00g114840 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g114840
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	30S ribosomal protein S5
Location	Csor_Chr07: 1148178 .. 1149926 (+)
RNA-Seq Expression	Csor.00g114840
Synteny	Csor.00g114840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCAACTCTCGTCCCCATTTCCTTTCATTTTGTACGCTCTTCTCCCTTTCATCGTCTTCCAATTCCTCAATTGAAGCCTTTCTCCGGCGTCCACTCCGCCCTATCCGTAGCCCCAATTTCCTCCTCGATTCTCTCTGCAACTCGTGTCAAATCCTCAGACATTGATACTACCTTCTTTGATACCTTCAATCCCGATGAAGATTTTGTCTACGACCCTCCTGAAGTCCCGGAAGGCTTTGTCGCGCCTCCCTCCTTCGACGAGGGCCCATTAGAATCTGAGGACGAAATTGCCGCCGCTTACGAGGAGCTCTATGGCCCCGCTTACAGTGGAGTTAGTGTTCTGGGAAATGATATTTATGTAATGGATTCTAAGATGAAGAAATTGGGCGGATTCGGCTCAAAGATCAAGAAGGACAAGCTGCGGGATGGGTTCGAAGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTCGGTGATAAAAAGGGGCAGGTCGGTGTTGGTGTTGGTAAAGCTAAGGAAGTCATCTCCGCTGTCCAGAAATCGGCGATCAATGCTCGCCGGAATATCGTCACTGTCCCCATGACCAAGTACCTCACATTCCCCCACAGGTCCGTGACTTTGTCTTCGAATTGTAAAATTCCAATACCACTGAATTTGATACTAATAGAGGCTTCTGTAGTAGCTTTATTGTCATGCTTTAGTTGCTGATAATGGGAATGCGTTCAATTAGGAATATGGGATTTAAGGAAGAGTAGAATTGGATGATTATTGCTTATACTGGTCTATAGAACACCTTAGTTCAACTATAATCCTTACTTCGATAGTTCAATGACTTTGTTTGAAGTTATTTAATACCCCAATCCTGTAGTGTGCAGGCAGGTTGAACTTCGAATCCTTATTGAAAGTTGGTGTTTTGAGTTATTTGTTGGTTCTGTAGCTGCATTTTGCTTATATTGAGTTGTTGTTTGTAATTGACAAGGCATGTTTCCCAGTTTAGTCTAGAGTCCTACAGTTCAATTTAGTCAATTAGAGTATGCAGAACTTGTCTTTTTTCGATCGAGCGATCGAGCTTCCAGTGTTCGATCTGCAGCTGCAAGAATTAGTACCTAAAAAGCACCATGAGAATGAGAGATATATATAGAATGCTTTCATTTTAGATGCAAATATACAGAGTAAGGGCATGCTTTTTAGAGTGATTTTGTTAAAATCACTTTTGACATGTCCAAAATCATTTCGGAATGTATAGCAGTTTCTAGGAAGCGAGAAGCTAAAGCAAACAAACTCGACTTCAGCCAAGAAATTGTAGTTTGAAACTCAATTTTCCCACAAGTAACAAAAGCTTCAAATTATGAATCCTATATTAAAGTAGTATTTCAGTTGTATTCACATGTTGGGTTACCCTGTTTTACTGCAAATGTTGGCTAAGGAGAATGAAGAAATTGTAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTGAGGCCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGCGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCGTTAGGGAAGCAAATTGGAAGTAACAATGCCCTCAACAACGCCAGAGCAACAGTGGTCGCCGTTCAGAAGATGAAACAGTTTCGGGAGGTTGCACAGGAGCGAGGTATCCCCATGGAAGAGTTGTGGAAGTGA

mRNA sequence

ATGGCTTCTTCAACTCTCGTCCCCATTTCCTTTCATTTTGTACGCTCTTCTCCCTTTCATCGTCTTCCAATTCCTCAATTGAAGCCTTTCTCCGGCGTCCACTCCGCCCTATCCGTAGCCCCAATTTCCTCCTCGATTCTCTCTGCAACTCGTGTCAAATCCTCAGACATTGATACTACCTTCTTTGATACCTTCAATCCCGATGAAGATTTTGTCTACGACCCTCCTGAAGTCCCGGAAGGCTTTGTCGCGCCTCCCTCCTTCGACGAGGGCCCATTAGAATCTGAGGACGAAATTGCCGCCGCTTACGAGGAGCTCTATGGCCCCGCTTACAGTGGAGTTAGTGTTCTGGGAAATGATATTTATGTAATGGATTCTAAGATGAAGAAATTGGGCGGATTCGGCTCAAAGATCAAGAAGGACAAGCTGCGGGATGGGTTCGAAGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTCGGTGATAAAAAGGGGCAGGTCGGTGTTGGTGTTGGTAAAGCTAAGGAAGTCATCTCCGCTGTCCAGAAATCGGCGATCAATGCTCGCCGGAATATCGTCACTGTCCCCATGACCAAGTACCTCACATTCCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTGAGGCCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGCGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCGTTAGGGAAGCAAATTGGAAGTAACAATGCCCTCAACAACGCCAGAGCAACAGTGGTCGCCGTTCAGAAGATGAAACAGTTTCGGGAGGTTGCACAGGAGCGAGGTATCCCCATGGAAGAGTTGTGGAAGTGA

Coding sequence (CDS)

ATGGCTTCTTCAACTCTCGTCCCCATTTCCTTTCATTTTGTACGCTCTTCTCCCTTTCATCGTCTTCCAATTCCTCAATTGAAGCCTTTCTCCGGCGTCCACTCCGCCCTATCCGTAGCCCCAATTTCCTCCTCGATTCTCTCTGCAACTCGTGTCAAATCCTCAGACATTGATACTACCTTCTTTGATACCTTCAATCCCGATGAAGATTTTGTCTACGACCCTCCTGAAGTCCCGGAAGGCTTTGTCGCGCCTCCCTCCTTCGACGAGGGCCCATTAGAATCTGAGGACGAAATTGCCGCCGCTTACGAGGAGCTCTATGGCCCCGCTTACAGTGGAGTTAGTGTTCTGGGAAATGATATTTATGTAATGGATTCTAAGATGAAGAAATTGGGCGGATTCGGCTCAAAGATCAAGAAGGACAAGCTGCGGGATGGGTTCGAAGAGCGGGTTGTGCAAGTTCGGAGGGTCACTAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGGGCAATTGTTGTTGTCGGTGATAAAAAGGGGCAGGTCGGTGTTGGTGTTGGTAAAGCTAAGGAAGTCATCTCCGCTGTCCAGAAATCGGCGATCAATGCTCGCCGGAATATCGTCACTGTCCCCATGACCAAGTACCTCACATTCCCCCACAGGTCGGAGGGAGATTATGGAGCAGCAAAAGTAATGCTGAGGCCTGCTTCTCCTGGTACTGGTGTGATTGCTGGTGGAGCAGTGCGAATCGTCCTCGAAATGGCGGGTGTCGAGAATGCGTTAGGGAAGCAAATTGGAAGTAACAATGCCCTCAACAACGCCAGAGCAACAGTGGTCGCCGTTCAGAAGATGAAACAGTTTCGGGAGGTTGCACAGGAGCGAGGTATCCCCATGGAAGAGTTGTGGAAGTGA

Protein sequence

MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTTFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGNDIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELWK

Homology

[Close]

BLAST of Csor.00g114840 vs. ExPASy Swiss-Prot
Match: Q9ST69 (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-108
Identity = 197/252 (78.17%), Postives = 225/252 (89.29%), Query Frame = 0


Query: 52  VKSSDIDTTFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAY 111
           +K  DID TFF+  NPDE+  +DPPE PEG++ P + DE P ESE+EIA AYEELYG AY
Sbjct: 57  IKKDDIDITFFEQDNPDEEITFDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAY 116

Query: 112 SGVSVLGNDIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRA 171
           SG S+LGND+Y MDSK+KK  GFGSK KK+K+RDGFEE VVQVRRVTKVVKGGK + FRA
Sbjct: 117 SGESLLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRA 176

Query: 172 IVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKV 231
           IVVVGDKKGQVGVGVGKAKEV+SAVQK+A++ARRNI+TVPMTKYLTFPHR+E DYGAA+V
Sbjct: 177 IVVVGDKKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARV 236

Query: 232 MLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVA 291
           MLRPA+PGTGVIAGGAVR VLEMAGVENALGKQ+GSNNALNNARAT+VAVQ M+QF +VA
Sbjct: 237 MLRPAAPGTGVIAGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVA 296

Query: 292 QERGIPMEELWK 304
           ++RGIPMEELWK
Sbjct: 297 RDRGIPMEELWK 308

[Close]

BLAST of Csor.00g114840 vs. ExPASy Swiss-Prot
Match: P93014 (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 5.3e-106
Identity = 203/261 (77.78%), Postives = 226/261 (86.59%), Query Frame = 0


Query: 45  SILSATRVKSSDIDTTFFDTFNPD--EDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAA 104
           S L+  +  S+D +T FF+   P+   + V+DPP  PEGFV+PP FDEG  E+E+EIA A
Sbjct: 43  SSLTLVKASSTDTETIFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATA 102

Query: 105 YEELYGPAYSGVSVLGNDIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVK 164
           +EELYGPAYSG S+LG DIYVMDSK KK  G G K KKDK+RDGFEERVVQVRRVTKVVK
Sbjct: 103 FEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVK 162

Query: 165 GGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRS 224
           GGKQL FRAIVVVGDK+G VGVG  KAKEV++AVQKSAI+ARRNIV VPMTKY TFPHRS
Sbjct: 163 GGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRS 222

Query: 225 EGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQ 284
           EGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARAT+ AVQ
Sbjct: 223 EGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQ 282

Query: 285 KMKQFREVAQERGIPMEELWK 304
           +M+QFR+VAQERGIPMEELWK
Sbjct: 283 QMRQFRDVAQERGIPMEELWK 303

[Close]

BLAST of Csor.00g114840 vs. ExPASy Swiss-Prot
Match: Q1XDJ0 (30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.2e-47
Identity = 98/167 (58.68%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 137 KIKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISA 196
           K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+V+G+++GQVGVGVGKA +VI A
Sbjct: 6   KQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGA 65

Query: 197 VQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 256
           V+K   +A++++VTVP+TK  + PH   G  GAAKV+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66  VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELS 125

Query: 257 GVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELW 303
           GV+N L KQ+GSNN LNNARA +  + +++ F E A++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIESLY 172

[Close]

BLAST of Csor.00g114840 vs. ExPASy Swiss-Prot
Match: B1WQS7 (30S ribosomal protein S5 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rpsE PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.2e-47
Identity = 98/167 (58.68%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 137 KIKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISA 196
           K  +DK +D  ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG++KGQVGVGVGKA +VI A
Sbjct: 6   KSNRDKSKDSNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNEKGQVGVGVGKAGDVIGA 65

Query: 197 VQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMA 256
           V+K   + ++ ++ V +TK  +  H ++G  G AKV++RPA+PGTGVIAGGAVR VLE+A
Sbjct: 66  VRKGVADGKKQLIDVSLTKSSSITHVAKGVSGGAKVIVRPAAPGTGVIAGGAVRTVLELA 125

Query: 257 GVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELW 303
           G++N L KQ+GSNN LNNARA + A++ ++ F EVAQERG+P+E L+
Sbjct: 126 GLKNILAKQLGSNNPLNNARAVINALEGLRTFSEVAQERGVPLEHLY 172

[Close]

BLAST of Csor.00g114840 vs. ExPASy Swiss-Prot
Match: Q31L23 (30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpsE PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 9.5e-47
Identity = 97/178 (54.49%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 125 DSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGV 184
           + K KK        ++ +    ++ERVVQ+RRVTKVVKGGK+L FRAIV+VG+++GQVGV
Sbjct: 3   EEKDKKQSSRRRNNRRTEKESEWQERVVQIRRVTKVVKGGKKLSFRAIVIVGNERGQVGV 62

Query: 185 GVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIA 244
           GVGKA +VI AV+K   + ++++V VP+T+  + PH S G+ GAA+V++RPA+PGTGVIA
Sbjct: 63  GVGKASDVIGAVRKGVADGKKHLVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIA 122

Query: 245 GGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEELW 303
           GGAVR VLE+AGV+N L K++GS + LNNARA + A+  ++ F+EVAQ R IP+E+L+
Sbjct: 123 GGAVRTVLELAGVKNVLAKRLGSKSPLNNARAALEALSSLRTFQEVAQSRDIPVEQLY 180

[Close]

BLAST of Csor.00g114840 vs. NCBI nr
Match: XP_022926879.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita moschata] >XP_022926880.1 30S ribosomal protein S5, chloroplastic-like [Cucurbita moschata] >KAG6594598.1 30S ribosomal protein S5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026569.1 30S ribosomal protein S5, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 582 bits (1500), Expect = 3.99e-209
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60
           MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT
Sbjct: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60

Query: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120
           FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND
Sbjct: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120

Query: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180
           IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG
Sbjct: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180

Query: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240
           QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT
Sbjct: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240

Query: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300
           GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE
Sbjct: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300

Query: 301 LWK 303
           LWK
Sbjct: 301 LWK 303

[Close]

BLAST of Csor.00g114840 vs. NCBI nr
Match: XP_023518483.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023518484.1 30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578 bits (1490), Expect = 1.34e-207
Identity = 300/303 (99.01%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60
           MASSTLVPI+FHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRV+SSDIDTT
Sbjct: 1   MASSTLVPIAFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVRSSDIDTT 60

Query: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120
           FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND
Sbjct: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120

Query: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180
           IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG
Sbjct: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180

Query: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240
           QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT
Sbjct: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240

Query: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300
           GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVA+ERGIPMEE
Sbjct: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVARERGIPMEE 300

Query: 301 LWK 303
           LWK
Sbjct: 301 LWK 303

[Close]

BLAST of Csor.00g114840 vs. NCBI nr
Match: XP_023003349.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita maxima] >XP_023003350.1 30S ribosomal protein S5, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 575 bits (1482), Expect = 2.21e-206
Identity = 300/303 (99.01%), Postives = 301/303 (99.34%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60
           MASSTLVPISFHFVRSS FHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT
Sbjct: 1   MASSTLVPISFHFVRSSSFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60

Query: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120
           F DTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND
Sbjct: 61  FLDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120

Query: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180
           IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG
Sbjct: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180

Query: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240
           QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT
Sbjct: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240

Query: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300
           GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVA+ERGIPMEE
Sbjct: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVARERGIPMEE 300

Query: 301 LWK 303
           LWK
Sbjct: 301 LWK 303

[Close]

BLAST of Csor.00g114840 vs. NCBI nr
Match: XP_022142374.1 (30S ribosomal protein S5, chloroplastic [Momordica charantia])

HSP 1 Score: 515 bits (1326), Expect = 1.36e-182
Identity = 270/304 (88.82%), Postives = 287/304 (94.41%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSS-ILSATRVKSSDIDT 60
           MASSTLVPIS   +RSSP HRLPI  LKPF+ +HSALS+APISSS IL+  R KSSDIDT
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60

Query: 61  TFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120
           TFFD   P++D VYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEE+YGPAYSGVSVLGN
Sbjct: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120

Query: 121 DIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180
           DI+VMDSK+KK+GGFGSK KKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+
Sbjct: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180

Query: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSA+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATV AVQKMKQFREVAQERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300

Query: 301 ELWK 303
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of Csor.00g114840 vs. NCBI nr
Match: XP_023544602.1 (30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513 bits (1322), Expect = 5.52e-182
Identity = 270/304 (88.82%), Postives = 286/304 (94.08%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSS-ILSATRVKSSDIDT 60
           MASS +VPIS   +RSSP + LPIP LKPF+ +HSA+SV PISSS ILSA R K SDIDT
Sbjct: 1   MASSIIVPISSLSLRSSPSYCLPIPPLKPFTLLHSAVSVPPISSSSILSAARAKPSDIDT 60

Query: 61  TFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120
           TFF++ NP+ED VYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN
Sbjct: 61  TFFESINPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180
           DIYVMDSKMKK+GGFGSK +K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATVVAV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 303
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of Csor.00g114840 vs. ExPASy TrEMBL
Match: A0A6J1EMC0 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433861 PE=3 SV=1)

HSP 1 Score: 582 bits (1500), Expect = 1.93e-209
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60
           MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT
Sbjct: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60

Query: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120
           FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND
Sbjct: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120

Query: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180
           IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG
Sbjct: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180

Query: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240
           QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT
Sbjct: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240

Query: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300
           GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE
Sbjct: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300

Query: 301 LWK 303
           LWK
Sbjct: 301 LWK 303

[Close]

BLAST of Csor.00g114840 vs. ExPASy TrEMBL
Match: A0A6J1KT29 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111496982 PE=3 SV=1)

HSP 1 Score: 575 bits (1482), Expect = 1.07e-206
Identity = 300/303 (99.01%), Postives = 301/303 (99.34%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60
           MASSTLVPISFHFVRSS FHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT
Sbjct: 1   MASSTLVPISFHFVRSSSFHRLPIPQLKPFSGVHSALSVAPISSSILSATRVKSSDIDTT 60

Query: 61  FFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120
           F DTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND
Sbjct: 61  FLDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGND 120

Query: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180
           IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG
Sbjct: 121 IYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKG 180

Query: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240
           QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT
Sbjct: 181 QVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGT 240

Query: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPMEE 300
           GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVA+ERGIPMEE
Sbjct: 241 GVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVARERGIPMEE 300

Query: 301 LWK 303
           LWK
Sbjct: 301 LWK 303

[Close]

BLAST of Csor.00g114840 vs. ExPASy TrEMBL
Match: A0A6J1CLD7 (30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012511 PE=3 SV=1)

HSP 1 Score: 515 bits (1326), Expect = 6.57e-183
Identity = 270/304 (88.82%), Postives = 287/304 (94.41%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSS-ILSATRVKSSDIDT 60
           MASSTLVPIS   +RSSP HRLPI  LKPF+ +HSALS+APISSS IL+  R KSSDIDT
Sbjct: 1   MASSTLVPISSLSLRSSPSHRLPILPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDT 60

Query: 61  TFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120
           TFFD   P++D VYDPPEVPEGFVAPPSFDEGPLE+E+EIAAAYEE+YGPAYSGVSVLGN
Sbjct: 61  TFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGPAYSGVSVLGN 120

Query: 121 DIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180
           DI+VMDSK+KK+GGFGSK KKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+
Sbjct: 121 DIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQ 180

Query: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSA+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATV AVQKMKQFREVAQERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME 300

Query: 301 ELWK 303
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of Csor.00g114840 vs. ExPASy TrEMBL
Match: A0A6J1IU44 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478601 PE=3 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 3.12e-181
Identity = 269/304 (88.49%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSS-ILSATRVKSSDIDT 60
           MASS +VPIS   +RSSP + LPIP LKPF+ +HSA+SV PISSS ILSA R K SDIDT
Sbjct: 1   MASSIVVPISSLSLRSSPSYCLPIPPLKPFTVLHSAVSVPPISSSLILSAARAKPSDIDT 60

Query: 61  TFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120
            FF++ NP+ED VYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN
Sbjct: 61  IFFESVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180
           DIYVMDSKMKK+GGFGSK +K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATVVAV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 303
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of Csor.00g114840 vs. ExPASy TrEMBL
Match: A0A6J1EDM2 (30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433236 PE=3 SV=1)

HSP 1 Score: 509 bits (1310), Expect = 1.80e-180
Identity = 266/304 (87.50%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MASSTLVPISFHFVRSSPFHRLPIPQLKPFSGVHSALSVAPISSS-ILSATRVKSSDIDT 60
           MASS +VPIS   +RSSP + LPIP LKPF+ +HS++SV PISSS ILS  R K SD++T
Sbjct: 1   MASSIIVPISSLSLRSSPSYCLPIPPLKPFTVLHSSVSVPPISSSLILSVARAKPSDVET 60

Query: 61  TFFDTFNPDEDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120
           TFF++ NP+ED VYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN
Sbjct: 61  TFFESVNPEEDVVYDPPEVPEGFVAPPSFDEGPLESEDEIAAAYEELYGPAYSGVSVLGN 120

Query: 121 DIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180
           DIYVMDSKMKK+GGFGSK +K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK
Sbjct: 121 DIYVMDSKMKKVGGFGSKARKEKARDGFDERVVQVRRVTKVVKGGKQLHFRAIVVVGDKK 180

Query: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240
           GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG
Sbjct: 181 GQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPG 240

Query: 241 TGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERGIPME 300
           TGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARATVVAV KMKQFR+VA+ERGIPME
Sbjct: 241 TGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVMKMKQFRDVARERGIPME 300

Query: 301 ELWK 303
           ELWK
Sbjct: 301 ELWK 304

[Close]

BLAST of Csor.00g114840 vs. TAIR 10
Match: AT2G33800.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 385.6 bits (989), Expect = 3.7e-107
Identity = 203/261 (77.78%), Postives = 226/261 (86.59%), Query Frame = 0


Query: 45  SILSATRVKSSDIDTTFFDTFNPD--EDFVYDPPEVPEGFVAPPSFDEGPLESEDEIAAA 104
           S L+  +  S+D +T FF+   P+   + V+DPP  PEGFV+PP FDEG  E+E+EIA A
Sbjct: 43  SSLTLVKASSTDTETIFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATA 102

Query: 105 YEELYGPAYSGVSVLGNDIYVMDSKMKKLGGFGSKIKKDKLRDGFEERVVQVRRVTKVVK 164
           +EELYGPAYSG S+LG DIYVMDSK KK  G G K KKDK+RDGFEERVVQVRRVTKVVK
Sbjct: 103 FEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVK 162

Query: 165 GGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNIVTVPMTKYLTFPHRS 224
           GGKQL FRAIVVVGDK+G VGVG  KAKEV++AVQKSAI+ARRNIV VPMTKY TFPHRS
Sbjct: 163 GGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRS 222

Query: 225 EGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIGSNNALNNARATVVAVQ 284
           EGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQ+GSNNALNNARAT+ AVQ
Sbjct: 223 EGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQ 282

Query: 285 KMKQFREVAQERGIPMEELWK 304
           +M+QFR+VAQERGIPMEELWK
Sbjct: 283 QMRQFRDVAQERGIPMEELWK 303

[Close]

BLAST of Csor.00g114840 vs. TAIR 10
Match: AT1G64880.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-14
Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 137 KIKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAV 196
           K ++   R G++  V+ V++V KV KGG+   + A++V G+ +G +G    KA+   SA+
Sbjct: 348 KKRQPLYRKGYDVHVIDVKKVCKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAM 407

Query: 197 QKSAINARRNIVTVPMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 256
           QK+     +N+  V   +  T  H  +  Y   K+ L PA   TG+ AG  V+ +L +AG
Sbjct: 408 QKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAG 467

Query: 257 VENALGKQIGSNNALNNARATVVAVQKMKQFREVAQERG 296
            +N   K IGS N+ N  +A + A+  ++  ++V ++ G
Sbjct: 468 FKNIKSKVIGSRNSYNTVKAVLKALNAVETPKDVQEKFG 506

[Close]

BLAST of Csor.00g114840 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 148 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNI 207
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + I A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 208 VTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 267
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 268 LGKQIGSNNALNN-ARATVVAVQKMKQF 288
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]

BLAST of Csor.00g114840 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 148 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNI 207
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + I A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 208 VTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 267
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 268 LGKQIGSNNALNN-ARATVVAVQKMKQF 288
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

[Close]

BLAST of Csor.00g114840 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-12
Identity = 48/148 (32.43%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 148 EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKKGQVGVGVGKAKEVISAVQKSAINARRNI 207
           ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + I A+ ++
Sbjct: 96  KDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSV 155

Query: 208 VTV-------PMTKYLTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENA 267
           V V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++ 
Sbjct: 156 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDV 215

Query: 268 LGKQIGSNNALNN-ARATVVAVQKMKQF 288
                GS   L N  +AT   +QK   F
Sbjct: 216 FTSSRGSTKTLGNFVKATFDCLQKTYGF 243

The following BLAST results are available for this feature:

BLAST of Csor.00g114840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ST69	1.9e-108	78.17	30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps5 PE=...	[more]
P93014	5.3e-106	77.78	30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rps5 ...	[more]
Q1XDJ0	7.2e-47	58.68	30S ribosomal protein S5, chloroplastic OS=Pyropia yezoensis OX=2788 GN=rps5 PE=...	[more]
B1WQS7	7.2e-47	58.68	30S ribosomal protein S5 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) O...	[more]
Q31L23	9.5e-47	54.49	30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805...	[more]

BLAST of Csor.00g114840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926879.1	3.99e-209	100.00	30S ribosomal protein S5, chloroplastic-like [Cucurbita moschata] >XP_022926880....	[more]
XP_023518483.1	1.34e-207	99.01	30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_023003349.1	2.21e-206	99.01	30S ribosomal protein S5, chloroplastic-like [Cucurbita maxima] >XP_023003350.1 ...	[more]
XP_022142374.1	1.36e-182	88.82	30S ribosomal protein S5, chloroplastic [Momordica charantia]	[more]
XP_023544602.1	5.52e-182	88.82	30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g114840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMC0	1.93e-209	100.00	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KT29	1.07e-206	99.01	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1CLD7	6.57e-183	88.82	30S ribosomal protein S5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1IU44	3.12e-181	88.49	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EDM2	1.80e-180	87.50	30S ribosomal protein S5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Csor.00g114840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33800.1	3.7e-107	77.78	Ribosomal protein S5 family protein	[more]
AT1G64880.1	1.3e-14	31.45	Ribosomal protein S5 family protein	[more]
AT1G58983.1	2.7e-12	32.43	Ribosomal protein S5 family protein	[more]
AT1G59359.1	2.7e-12	32.43	Ribosomal protein S5 family protein	[more]
AT1G58380.1	2.7e-12	32.43	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 147..211 e-value: 3.1E-24 score: 84.7
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 147..210 score: 25.16563
IPR005712	Ribosomal protein S5, bacterial-type	TIGRFAM	TIGR01021	TIGR01021	coord: 146..300 e-value: 3.6E-59 score: 197.0
IPR005712	Ribosomal protein S5, bacterial-type	HAMAP	MF_01307_B	Ribosomal_S5_B	coord: 128..300 score: 32.518894
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 214..302 e-value: 1.2E-27 score: 97.3
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 224..294 e-value: 1.4E-25 score: 88.5
None	No IPR available	GENE3D	3.30.160.20		coord: 137..208 e-value: 7.6E-24 score: 85.3
None	No IPR available	PANTHER	PTHR13718:SF94	30S RIBOSOMAL PROTEIN S5, CHLOROPLASTIC	coord: 43..303
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 142..212
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 43..303
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 164..196
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 217..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g114840.m01	Csor.00g114840.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding